EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000003467 (Gene tree)
Gene ID: -
Gene Symbol: BMS1
Alias: BMS1L|KIAA0187
Full Name: BMS1%2C ribosome biogenesis factor
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 40761 bases
Position: chrPPEB01000011.1:1044866-1085626
Accession: 23505
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000005901	AARP2CN	PF08142.12	1.8e-30	1	1
ENSGAGP00000005949	AARP2CN	PF08142.12	1.8e-30	1	1
ENSGAGP00000005914	AARP2CN	PF08142.12	1.8e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000006882	BMS1-201	3873	-	ENSGAGP00000005901	1290 (aa)	-	-
ENSGAGT00000006897	BMS1-202	3828	-	ENSGAGP00000005914	1275 (aa)	-	-
ENSGAGT00000006936	BMS1-203	3720	-	ENSGAGP00000005949	1239 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000003467's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000003467's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000003467	BMS1	99	73.282	ENSG00000165733	BMS1	99	74.395	Homo_sapiens
ENSGAGG00000003467	BMS1	72	72.378	ENSAPOG00000002296	bms1	97	69.600	Acanthochromis_polyacanthus
ENSGAGG00000003467	BMS1	99	73.385	ENSAMEG00000016834	BMS1	99	73.578	Ailuropoda_melanoleuca
ENSGAGG00000003467	BMS1	99	63.201	ENSACIG00000002588	bms1	98	68.590	Amphilophus_citrinellus
ENSGAGG00000003467	BMS1	88	68.800	ENSAOCG00000018088	bms1	99	63.301	Amphiprion_ocellaris
ENSGAGG00000003467	BMS1	86	68.143	ENSAPEG00000014673	bms1	99	62.789	Amphiprion_percula
ENSGAGG00000003467	BMS1	89	67.568	ENSATEG00000023465	bms1	96	67.576	Anabas_testudineus
ENSGAGG00000003467	BMS1	96	79.233	ENSAPLG00000003759	BMS1	99	80.716	Anas_platyrhynchos
ENSGAGG00000003467	BMS1	100	76.089	ENSACAG00000004537	-	100	76.095	Anolis_carolinensis
ENSGAGG00000003467	BMS1	99	72.537	ENSANAG00000023432	BMS1	99	73.557	Aotus_nancymaae
ENSGAGG00000003467	BMS1	93	68.211	ENSACLG00000001294	bms1	96	67.101	Astatotilapia_calliptera
ENSGAGG00000003467	BMS1	81	73.103	ENSAMXG00000011236	bms1	100	63.373	Astyanax_mexicanus
ENSGAGG00000003467	BMS1	100	72.692	ENSBTAG00000012878	BMS1	100	73.798	Bos_taurus
ENSGAGG00000003467	BMS1	81	52.750	WBGene00022021	Y61A9LA.10	96	52.899	Caenorhabditis_elegans
ENSGAGG00000003467	BMS1	99	72.860	ENSCJAG00000021705	BMS1	99	74.025	Callithrix_jacchus
ENSGAGG00000003467	BMS1	100	73.591	ENSCAFG00000007114	BMS1	100	73.241	Canis_familiaris
ENSGAGG00000003467	BMS1	100	73.591	ENSCAFG00020025282	BMS1	100	73.241	Canis_lupus_dingo
ENSGAGG00000003467	BMS1	100	72.960	ENSCHIG00000023251	BMS1	100	73.620	Capra_hircus
ENSGAGG00000003467	BMS1	99	68.851	ENSCAPG00000008652	BMS1	99	69.285	Cavia_aperea
ENSGAGG00000003467	BMS1	99	72.621	ENSCPOG00000000502	BMS1	99	72.819	Cavia_porcellus
ENSGAGG00000003467	BMS1	99	60.360	ENSCCAG00000024969	-	99	60.173	Cebus_capucinus
ENSGAGG00000003467	BMS1	90	55.116	ENSCATG00000008695	-	96	54.802	Cercocebus_atys
ENSGAGG00000003467	BMS1	99	73.107	ENSCATG00000030625	-	99	74.239	Cercocebus_atys
ENSGAGG00000003467	BMS1	99	72.840	ENSCLAG00000002446	BMS1	99	72.699	Chinchilla_lanigera
ENSGAGG00000003467	BMS1	99	73.627	ENSCSAG00000011118	BMS1	99	74.306	Chlorocebus_sabaeus
ENSGAGG00000003467	BMS1	100	73.098	ENSCHOG00000011055	BMS1	100	73.425	Choloepus_hoffmanni
ENSGAGG00000003467	BMS1	99	95.103	ENSCPBG00000025581	BMS1	99	95.103	Chrysemys_picta_bellii
ENSGAGG00000003467	BMS1	81	60.741	ENSCING00000003181	-	95	60.804	Ciona_intestinalis
ENSGAGG00000003467	BMS1	71	56.161	ENSCSAVG00000004113	-	88	56.019	Ciona_savignyi
ENSGAGG00000003467	BMS1	99	73.660	ENSCANG00000011609	BMS1	99	74.317	Colobus_angolensis_palliatus
ENSGAGG00000003467	BMS1	99	72.317	ENSCGRG00001019461	Bms1	99	73.433	Cricetulus_griseus_chok1gshd
ENSGAGG00000003467	BMS1	99	72.317	ENSCGRG00000009016	Bms1	99	73.433	Cricetulus_griseus_crigri
ENSGAGG00000003467	BMS1	82	74.239	ENSCSEG00000002469	bms1	95	68.954	Cynoglossus_semilaevis
ENSGAGG00000003467	BMS1	87	70.227	ENSCVAG00000008371	bms1	97	70.227	Cyprinodon_variegatus
ENSGAGG00000003467	BMS1	50	67.250	ENSDARG00000054154	bms1	99	64.035	Danio_rerio
ENSGAGG00000003467	BMS1	99	72.538	ENSDNOG00000015761	BMS1	99	73.463	Dasypus_novemcinctus
ENSGAGG00000003467	BMS1	99	74.453	ENSDORG00000002982	Bms1	99	74.608	Dipodomys_ordii
ENSGAGG00000003467	BMS1	78	60.963	FBgn0036686	CG7728	96	55.604	Drosophila_melanogaster
ENSGAGG00000003467	BMS1	86	72.321	ENSETEG00000009554	BMS1	91	72.321	Echinops_telfairi
ENSGAGG00000003467	BMS1	100	73.173	ENSEASG00005006894	BMS1	100	73.988	Equus_asinus_asinus
ENSGAGG00000003467	BMS1	100	73.504	ENSECAG00000001358	BMS1	100	73.988	Equus_caballus
ENSGAGG00000003467	BMS1	99	68.720	ENSELUG00000001756	bms1	95	69.169	Esox_lucius
ENSGAGG00000003467	BMS1	100	72.644	ENSFCAG00000011220	BMS1	100	73.180	Felis_catus
ENSGAGG00000003467	BMS1	100	78.971	ENSFALG00000006882	BMS1	99	79.107	Ficedula_albicollis
ENSGAGG00000003467	BMS1	99	71.972	ENSFDAG00000001422	BMS1	99	71.641	Fukomys_damarensis
ENSGAGG00000003467	BMS1	87	69.691	ENSFHEG00000003367	bms1	96	69.968	Fundulus_heteroclitus
ENSGAGG00000003467	BMS1	99	60.877	ENSGMOG00000000718	bms1	97	66.132	Gadus_morhua
ENSGAGG00000003467	BMS1	100	78.522	ENSGALG00000002624	BMS1	99	78.979	Gallus_gallus
ENSGAGG00000003467	BMS1	99	60.324	ENSGACG00000015334	bms1	91	67.147	Gasterosteus_aculeatus
ENSGAGG00000003467	BMS1	93	68.211	ENSHBUG00000022628	bms1	98	64.663	Haplochromis_burtoni
ENSGAGG00000003467	BMS1	99	72.044	ENSHGLG00000000477	BMS1	99	71.484	Heterocephalus_glaber_female
ENSGAGG00000003467	BMS1	99	71.809	ENSHGLG00100002176	BMS1	99	71.406	Heterocephalus_glaber_male
ENSGAGG00000003467	BMS1	95	66.667	ENSHCOG00000017604	bms1	97	67.700	Hippocampus_comes
ENSGAGG00000003467	BMS1	99	62.382	ENSIPUG00000017855	bms1	99	61.586	Ictalurus_punctatus
ENSGAGG00000003467	BMS1	99	72.071	ENSSTOG00000015063	BMS1	99	73.442	Ictidomys_tridecemlineatus
ENSGAGG00000003467	BMS1	99	72.564	ENSJJAG00000017328	Bms1	99	72.770	Jaculus_jaculus
ENSGAGG00000003467	BMS1	57	65.918	ENSKMAG00000021982	bms1	95	62.590	Kryptolebias_marmoratus
ENSGAGG00000003467	BMS1	83	71.954	ENSLBEG00000028208	bms1	98	64.774	Labrus_bergylta
ENSGAGG00000003467	BMS1	99	65.125	ENSLACG00000001600	BMS1	100	65.163	Latimeria_chalumnae
ENSGAGG00000003467	BMS1	83	76.126	ENSLOCG00000012914	bms1	99	66.138	Lepisosteus_oculatus
ENSGAGG00000003467	BMS1	99	71.286	ENSLAFG00000006250	BMS1	99	71.617	Loxodonta_africana
ENSGAGG00000003467	BMS1	84	79.297	ENSMFAG00000037771	BMS1	98	79.623	Macaca_fascicularis
ENSGAGG00000003467	BMS1	90	62.925	ENSMMUG00000007426	-	98	63.203	Macaca_mulatta
ENSGAGG00000003467	BMS1	88	55.604	ENSMLEG00000029084	-	99	55.605	Mandrillus_leucophaeus
ENSGAGG00000003467	BMS1	99	64.407	ENSMAMG00000020855	bms1	98	65.038	Mastacembelus_armatus
ENSGAGG00000003467	BMS1	93	68.211	ENSMZEG00005005663	bms1	98	64.679	Maylandia_zebra
ENSGAGG00000003467	BMS1	96	78.389	ENSMGAG00000001170	BMS1	99	79.107	Meleagris_gallopavo
ENSGAGG00000003467	BMS1	99	72.627	ENSMAUG00000002195	Bms1	99	73.297	Mesocricetus_auratus
ENSGAGG00000003467	BMS1	100	72.504	ENSMICG00000009977	BMS1	100	72.770	Microcebus_murinus
ENSGAGG00000003467	BMS1	99	72.218	ENSMOCG00000002038	Bms1	99	72.763	Microtus_ochrogaster
ENSGAGG00000003467	BMS1	89	67.835	ENSMMOG00000000977	bms1	97	67.208	Mola_mola
ENSGAGG00000003467	BMS1	99	74.924	ENSMODG00000001177	BMS1	99	75.346	Monodelphis_domestica
ENSGAGG00000003467	BMS1	99	61.830	ENSMALG00000009680	bms1	95	67.203	Monopterus_albus
ENSGAGG00000003467	BMS1	74	86.650	MGP_CAROLIEiJ_G0028785	-	85	86.618	Mus_caroli
ENSGAGG00000003467	BMS1	99	72.292	ENSMUSG00000030138	Bms1	99	72.517	Mus_musculus
ENSGAGG00000003467	BMS1	99	72.175	MGP_PahariEiJ_G0022539	Bms1	99	72.763	Mus_pahari
ENSGAGG00000003467	BMS1	99	71.904	MGP_SPRETEiJ_G0029816	Bms1	99	72.248	Mus_spretus
ENSGAGG00000003467	BMS1	100	73.815	ENSMPUG00000017276	BMS1	100	74.415	Mustela_putorius_furo
ENSGAGG00000003467	BMS1	100	73.032	ENSMLUG00000003260	BMS1	100	73.188	Myotis_lucifugus
ENSGAGG00000003467	BMS1	99	65.764	ENSNGAG00000015258	Bms1	99	65.860	Nannospalax_galili
ENSGAGG00000003467	BMS1	99	72.046	ENSNLEG00000015791	BMS1	99	73.339	Nomascus_leucogenys
ENSGAGG00000003467	BMS1	83	85.407	ENSOPRG00000005195	BMS1	81	85.646	Ochotona_princeps
ENSGAGG00000003467	BMS1	99	72.077	ENSODEG00000005554	BMS1	99	72.118	Octodon_degus
ENSGAGG00000003467	BMS1	99	63.658	ENSONIG00000007227	bms1	97	69.417	Oreochromis_niloticus
ENSGAGG00000003467	BMS1	100	73.883	ENSOANG00000000662	-	100	73.974	Ornithorhynchus_anatinus
ENSGAGG00000003467	BMS1	99	72.996	ENSOCUG00000005354	BMS1	99	73.323	Oryctolagus_cuniculus
ENSGAGG00000003467	BMS1	89	68.167	ENSORLG00000014655	bms1	97	68.447	Oryzias_latipes
ENSGAGG00000003467	BMS1	89	67.949	ENSORLG00020016246	bms1	98	65.672	Oryzias_latipes_hni
ENSGAGG00000003467	BMS1	89	68.109	ENSORLG00015014183	bms1	98	65.299	Oryzias_latipes_hsok
ENSGAGG00000003467	BMS1	83	74.545	ENSOMEG00000015042	bms1	96	69.952	Oryzias_melastigma
ENSGAGG00000003467	BMS1	99	72.303	ENSOGAG00000006511	BMS1	99	73.607	Otolemur_garnettii
ENSGAGG00000003467	BMS1	100	72.734	ENSOARG00000003900	BMS1	100	73.394	Ovis_aries
ENSGAGG00000003467	BMS1	99	69.830	ENSPPAG00000027837	BMS1	99	70.827	Pan_paniscus
ENSGAGG00000003467	BMS1	100	72.776	ENSPPRG00000001311	BMS1	100	73.139	Panthera_pardus
ENSGAGG00000003467	BMS1	100	71.461	ENSPTIG00000009652	BMS1	100	71.702	Panthera_tigris_altaica
ENSGAGG00000003467	BMS1	99	73.359	ENSPTRG00000002441	BMS1	99	74.317	Pan_troglodytes
ENSGAGG00000003467	BMS1	50	67.680	ENSPKIG00000008165	bms1	99	61.352	Paramormyrops_kingsleyae
ENSGAGG00000003467	BMS1	100	87.156	ENSPSIG00000006481	BMS1	99	86.880	Pelodiscus_sinensis
ENSGAGG00000003467	BMS1	99	66.615	ENSPEMG00000022467	Bms1	99	66.848	Peromyscus_maniculatus_bairdii
ENSGAGG00000003467	BMS1	90	84.746	ENSPCIG00000001339	BMS1	99	84.507	Phascolarctos_cinereus
ENSGAGG00000003467	BMS1	85	67.886	ENSPFOG00000015180	bms1	99	67.132	Poecilia_formosa
ENSGAGG00000003467	BMS1	90	67.427	ENSPMEG00000023176	bms1	93	64.804	Poecilia_mexicana
ENSGAGG00000003467	BMS1	81	74.634	ENSPREG00000002695	bms1	97	66.718	Poecilia_reticulata
ENSGAGG00000003467	BMS1	61	69.231	ENSPPYG00000002836	-	99	70.860	Pongo_abelii
ENSGAGG00000003467	BMS1	75	85.714	ENSPCAG00000014528	BMS1	73	85.714	Procavia_capensis
ENSGAGG00000003467	BMS1	95	70.185	ENSPCOG00000023834	-	100	70.944	Propithecus_coquereli
ENSGAGG00000003467	BMS1	100	72.549	ENSPVAG00000000725	BMS1	100	72.044	Pteropus_vampyrus
ENSGAGG00000003467	BMS1	97	63.265	ENSPNYG00000018866	bms1	95	69.055	Pundamilia_nyererei
ENSGAGG00000003467	BMS1	98	63.183	ENSPNAG00000000676	bms1	98	63.990	Pygocentrus_nattereri
ENSGAGG00000003467	BMS1	82	71.857	ENSRNOG00000006576	Bms1	100	72.805	Rattus_norvegicus
ENSGAGG00000003467	BMS1	99	71.846	ENSRROG00000040101	BMS1	99	73.057	Rhinopithecus_roxellana
ENSGAGG00000003467	BMS1	74	46.407	YPL217C	-	79	47.817	Saccharomyces_cerevisiae
ENSGAGG00000003467	BMS1	99	73.561	ENSSBOG00000035778	BMS1	99	74.103	Saimiri_boliviensis_boliviensis
ENSGAGG00000003467	BMS1	99	73.130	ENSSHAG00000005062	BMS1	99	73.893	Sarcophilus_harrisii
ENSGAGG00000003467	BMS1	99	63.174	ENSSFOG00015022313	bms1	99	63.651	Scleropages_formosus
ENSGAGG00000003467	BMS1	83	74.600	ENSSMAG00000019966	bms1	96	69.614	Scophthalmus_maximus
ENSGAGG00000003467	BMS1	87	68.071	ENSSDUG00000016875	bms1	96	65.809	Seriola_dumerili
ENSGAGG00000003467	BMS1	87	68.720	ENSSLDG00000015199	bms1	98	62.767	Seriola_lalandi_dorsalis
ENSGAGG00000003467	BMS1	70	60.590	ENSSARG00000014407	BMS1	100	63.211	Sorex_araneus
ENSGAGG00000003467	BMS1	100	80.596	ENSSPUG00000014454	BMS1	100	80.763	Sphenodon_punctatus
ENSGAGG00000003467	BMS1	99	73.789	ENSSSCG00000010198	BMS1	99	74.422	Sus_scrofa
ENSGAGG00000003467	BMS1	99	78.490	ENSTGUG00000006302	-	99	78.875	Taeniopygia_guttata
ENSGAGG00000003467	BMS1	90	64.948	ENSTRUG00000008028	bms1	97	64.459	Takifugu_rubripes
ENSGAGG00000003467	BMS1	99	59.659	ENSTNIG00000006216	bms1	99	58.366	Tetraodon_nigroviridis
ENSGAGG00000003467	BMS1	62	79.730	ENSTBEG00000001673	-	63	79.795	Tupaia_belangeri
ENSGAGG00000003467	BMS1	100	71.527	ENSTTRG00000007983	BMS1	100	71.803	Tursiops_truncatus
ENSGAGG00000003467	BMS1	100	73.188	ENSUAMG00000023996	BMS1	100	73.947	Ursus_americanus
ENSGAGG00000003467	BMS1	100	73.032	ENSUMAG00000016523	BMS1	100	73.791	Ursus_maritimus
ENSGAGG00000003467	BMS1	84	80.625	ENSVPAG00000007477	BMS1	93	83.442	Vicugna_pacos
ENSGAGG00000003467	BMS1	100	74.647	ENSVVUG00000021305	BMS1	100	74.763	Vulpes_vulpes
ENSGAGG00000003467	BMS1	98	69.317	ENSXETG00000008158	bms1	99	70.420	Xenopus_tropicalis
ENSGAGG00000003467	BMS1	88	67.568	ENSXCOG00000000506	bms1	91	77.749	Xiphophorus_couchianus
ENSGAGG00000003467	BMS1	89	67.850	ENSXMAG00000014236	bms1	96	69.156	Xiphophorus_maculatus