EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000003656 (Gene tree)
Gene ID: -
Gene Symbol: HNRNPD
Alias: AUF1|HNRPD
Full Name: heterogeneous nuclear ribonucleoprotein D
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 27449 bases
Position: chrPPEB01005966.1:65295-92743
Accession: 5036
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000004413	CBFNT	PF08143.11	7.1e-07	1	1
ENSGAGP00000004410	CBFNT	PF08143.11	8.5e-07	1	1
ENSGAGP00000004415	CBFNT	PF08143.11	8.9e-07	1	1
ENSGAGP00000004408	CBFNT	PF08143.11	9.2e-07	1	1
ENSGAGP00000004413	RRM_1	PF00076.22	2.7e-36	1	2
ENSGAGP00000004413	RRM_1	PF00076.22	2.7e-36	2	2
ENSGAGP00000004410	RRM_1	PF00076.22	3.8e-36	1	2
ENSGAGP00000004410	RRM_1	PF00076.22	3.8e-36	2	2
ENSGAGP00000004415	RRM_1	PF00076.22	4.1e-36	1	2
ENSGAGP00000004415	RRM_1	PF00076.22	4.1e-36	2	2
ENSGAGP00000004408	RRM_1	PF00076.22	4.4e-36	1	2
ENSGAGP00000004408	RRM_1	PF00076.22	4.4e-36	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000005176	HNRNPD-202	1661	-	ENSGAGP00000004410	382 (aa)	-	-
ENSGAGT00000005174	HNRNPD-201	1718	-	ENSGAGP00000004408	401 (aa)	-	-
ENSGAGT00000005181	HNRNPD-204	1418	-	ENSGAGP00000004415	392 (aa)	-	-
ENSGAGT00000005179	HNRNPD-203	1626	-	ENSGAGP00000004413	340 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000003656's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000003656's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000003656	HNRNPD	58	36.508	ENSGAGG00000014290	DAZAP1	55	35.802
ENSGAGG00000003656	HNRNPD	55	41.026	ENSGAGG00000006799	HNRNPA2B1	59	42.353
ENSGAGG00000003656	HNRNPD	87	62.300	ENSGAGG00000003646	HNRNPDL	94	60.066
ENSGAGG00000003656	HNRNPD	93	60.615	ENSGAGG00000007175	HNRNPAB	85	62.585
ENSGAGG00000003656	HNRNPD	77	40.075	ENSGAGG00000016037	MSI1	57	46.196

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000003656	HNRNPD	87	97.288	ENSG00000138668	HNRNPD	100	100.000	Homo_sapiens
ENSGAGG00000003656	HNRNPD	93	77.500	ENSAPOG00000006184	hnrnpd	86	79.795	Acanthochromis_polyacanthus
ENSGAGG00000003656	HNRNPD	89	95.724	ENSAMEG00000005158	HNRNPD	91	97.232	Ailuropoda_melanoleuca
ENSGAGG00000003656	HNRNPD	76	76.154	ENSACIG00000008353	hnrnpd	60	91.398	Amphilophus_citrinellus
ENSGAGG00000003656	HNRNPD	93	77.812	ENSAOCG00000014191	hnrnpd	86	80.137	Amphiprion_ocellaris
ENSGAGG00000003656	HNRNPD	93	77.500	ENSAPEG00000005603	hnrnpd	86	81.849	Amphiprion_percula
ENSGAGG00000003656	HNRNPD	93	76.562	ENSATEG00000007097	hnrnpd	86	79.110	Anabas_testudineus
ENSGAGG00000003656	HNRNPD	76	95.331	ENSACAG00000010342	HNRNPD	100	95.331	Anolis_carolinensis
ENSGAGG00000003656	HNRNPD	88	96.644	ENSANAG00000035221	HNRNPD	81	96.886	Aotus_nancymaae
ENSGAGG00000003656	HNRNPD	86	85.385	ENSACLG00000026497	hnrnpd	100	82.692	Astatotilapia_calliptera
ENSGAGG00000003656	HNRNPD	93	75.625	ENSACLG00000025213	hnrnpd	86	77.397	Astatotilapia_calliptera
ENSGAGG00000003656	HNRNPD	88	80.132	ENSAMXG00000001477	hnrnpd	88	77.740	Astyanax_mexicanus
ENSGAGG00000003656	HNRNPD	87	97.288	ENSBTAG00000013952	HNRNPD	81	97.232	Bos_taurus
ENSGAGG00000003656	HNRNPD	87	96.949	ENSCJAG00000015165	HNRNPD	81	96.886	Callithrix_jacchus
ENSGAGG00000003656	HNRNPD	87	97.288	ENSCAFG00000025045	HNRNPD	81	97.232	Canis_familiaris
ENSGAGG00000003656	HNRNPD	87	97.288	ENSCAFG00020010713	HNRNPD	81	97.232	Canis_lupus_dingo
ENSGAGG00000003656	HNRNPD	87	97.288	ENSCHIG00000022317	HNRNPD	81	97.232	Capra_hircus
ENSGAGG00000003656	HNRNPD	76	98.515	ENSTSYG00000010395	HNRNPD	100	98.515	Carlito_syrichta
ENSGAGG00000003656	HNRNPD	86	86.411	ENSCPOG00000040484	HNRNPD	86	86.411	Cavia_porcellus
ENSGAGG00000003656	HNRNPD	58	67.172	ENSCCAG00000021563	-	72	70.423	Cebus_capucinus
ENSGAGG00000003656	HNRNPD	87	96.949	ENSCCAG00000024528	HNRNPD	81	96.886	Cebus_capucinus
ENSGAGG00000003656	HNRNPD	87	97.288	ENSCATG00000039829	HNRNPD	81	97.232	Cercocebus_atys
ENSGAGG00000003656	HNRNPD	86	96.939	ENSCLAG00000006540	HNRNPD	92	96.939	Chinchilla_lanigera
ENSGAGG00000003656	HNRNPD	87	97.288	ENSCSAG00000004463	HNRNPD	81	97.232	Chlorocebus_sabaeus
ENSGAGG00000003656	HNRNPD	81	96.751	ENSCHOG00000000045	HNRNPD	100	96.751	Choloepus_hoffmanni
ENSGAGG00000003656	HNRNPD	100	97.421	ENSCPBG00000008025	HNRNPD	100	97.421	Chrysemys_picta_bellii
ENSGAGG00000003656	HNRNPD	87	96.949	ENSCANG00000018501	HNRNPD	81	97.232	Colobus_angolensis_palliatus
ENSGAGG00000003656	HNRNPD	87	96.610	ENSCGRG00001014634	Hnrnpd	82	96.886	Cricetulus_griseus_chok1gshd
ENSGAGG00000003656	HNRNPD	81	96.751	ENSCGRG00000007563	Hnrnpd	98	96.751	Cricetulus_griseus_crigri
ENSGAGG00000003656	HNRNPD	88	73.770	ENSCSEG00000010909	hnrnpd	86	74.830	Cynoglossus_semilaevis
ENSGAGG00000003656	HNRNPD	93	74.375	ENSCVAG00000019790	hnrnpd	86	75.685	Cyprinodon_variegatus
ENSGAGG00000003656	HNRNPD	100	74.344	ENSDARG00000059246	hnrnpd	87	78.425	Danio_rerio
ENSGAGG00000003656	HNRNPD	72	57.519	ENSDNOG00000041055	-	69	77.273	Dasypus_novemcinctus
ENSGAGG00000003656	HNRNPD	72	69.721	ENSDNOG00000045079	-	59	81.250	Dasypus_novemcinctus
ENSGAGG00000003656	HNRNPD	81	97.112	ENSDNOG00000013830	-	78	97.112	Dasypus_novemcinctus
ENSGAGG00000003656	HNRNPD	87	96.610	ENSDORG00000012507	Hnrnpd	93	96.886	Dipodomys_ordii
ENSGAGG00000003656	HNRNPD	85	92.388	ENSETEG00000016709	HNRNPD	81	92.388	Echinops_telfairi
ENSGAGG00000003656	HNRNPD	87	97.288	ENSEASG00005016278	HNRNPD	81	97.232	Equus_asinus_asinus
ENSGAGG00000003656	HNRNPD	87	97.288	ENSECAG00000009344	HNRNPD	81	97.232	Equus_caballus
ENSGAGG00000003656	HNRNPD	88	80.537	ENSEEUG00000007552	HNRNPD	81	80.623	Erinaceus_europaeus
ENSGAGG00000003656	HNRNPD	73	73.810	ENSELUG00000003230	hnrnpd	75	76.349	Esox_lucius
ENSGAGG00000003656	HNRNPD	87	97.288	ENSFCAG00000027404	HNRNPD	81	97.232	Felis_catus
ENSGAGG00000003656	HNRNPD	87	92.542	ENSFALG00000005716	HNRNPD	82	92.734	Ficedula_albicollis
ENSGAGG00000003656	HNRNPD	81	96.751	ENSFDAG00000007958	HNRNPD	82	96.751	Fukomys_damarensis
ENSGAGG00000003656	HNRNPD	93	73.750	ENSFHEG00000006838	hnrnpd	86	77.740	Fundulus_heteroclitus
ENSGAGG00000003656	HNRNPD	93	65.944	ENSGMOG00000018481	hnrnpd	86	70.169	Gadus_morhua
ENSGAGG00000003656	HNRNPD	100	86.297	ENSGALG00000011184	HNRNPD	100	98.444	Gallus_gallus
ENSGAGG00000003656	HNRNPD	93	72.446	ENSGAFG00000003714	hnrnpd	86	74.915	Gambusia_affinis
ENSGAGG00000003656	HNRNPD	93	72.036	ENSGACG00000015669	hnrnpd	86	74.497	Gasterosteus_aculeatus
ENSGAGG00000003656	HNRNPD	100	98.837	ENSGGOG00000026760	HNRNPD	94	98.837	Gorilla_gorilla
ENSGAGG00000003656	HNRNPD	93	75.625	ENSHBUG00000011794	hnrnpd	86	78.767	Haplochromis_burtoni
ENSGAGG00000003656	HNRNPD	88	96.309	ENSHGLG00000004214	HNRNPD	82	96.886	Heterocephalus_glaber_female
ENSGAGG00000003656	HNRNPD	86	98.837	ENSHGLG00100005996	HNRNPD	100	98.833	Heterocephalus_glaber_male
ENSGAGG00000003656	HNRNPD	94	71.028	ENSHCOG00000000087	hnrnpd	83	75.433	Hippocampus_comes
ENSGAGG00000003656	HNRNPD	88	72.667	ENSIPUG00000024954	hnrnpd	87	75.601	Ictalurus_punctatus
ENSGAGG00000003656	HNRNPD	87	96.610	ENSSTOG00000013970	HNRNPD	81	96.886	Ictidomys_tridecemlineatus
ENSGAGG00000003656	HNRNPD	87	97.288	ENSJJAG00000023387	Hnrnpd	92	92.388	Jaculus_jaculus
ENSGAGG00000003656	HNRNPD	88	78.073	ENSKMAG00000004310	hnrnpd	86	78.425	Kryptolebias_marmoratus
ENSGAGG00000003656	HNRNPD	95	74.233	ENSLBEG00000027508	hnrnpd	86	75.342	Labrus_bergylta
ENSGAGG00000003656	HNRNPD	100	78.299	ENSLACG00000005306	HNRNPD	87	84.429	Latimeria_chalumnae
ENSGAGG00000003656	HNRNPD	88	83.775	ENSLOCG00000010743	hnrnpd	87	76.289	Lepisosteus_oculatus
ENSGAGG00000003656	HNRNPD	81	96.751	ENSLAFG00000016483	HNRNPD	100	96.751	Loxodonta_africana
ENSGAGG00000003656	HNRNPD	87	97.288	ENSMFAG00000031674	HNRNPD	81	97.232	Macaca_fascicularis
ENSGAGG00000003656	HNRNPD	87	97.288	ENSMNEG00000028199	HNRNPD	81	97.232	Macaca_nemestrina
ENSGAGG00000003656	HNRNPD	87	97.288	ENSMLEG00000028370	HNRNPD	81	97.232	Mandrillus_leucophaeus
ENSGAGG00000003656	HNRNPD	93	75.312	ENSMAMG00000004971	hnrnpd	86	76.712	Mastacembelus_armatus
ENSGAGG00000003656	HNRNPD	93	75.625	ENSMZEG00005007558	hnrnpd	86	77.397	Maylandia_zebra
ENSGAGG00000003656	HNRNPD	86	98.450	ENSMGAG00000008051	HNRNPD	100	98.450	Meleagris_gallopavo
ENSGAGG00000003656	HNRNPD	87	96.610	ENSMAUG00000008830	Hnrnpd	82	96.886	Mesocricetus_auratus
ENSGAGG00000003656	HNRNPD	85	97.232	ENSMICG00000010984	HNRNPD	86	97.232	Microcebus_murinus
ENSGAGG00000003656	HNRNPD	88	95.973	ENSMOCG00000021398	Hnrnpd	82	96.886	Microtus_ochrogaster
ENSGAGG00000003656	HNRNPD	93	71.875	ENSMMOG00000008627	hnrnpd	86	74.658	Mola_mola
ENSGAGG00000003656	HNRNPD	88	96.656	ENSMODG00000011898	HNRNPD	83	93.291	Monodelphis_domestica
ENSGAGG00000003656	HNRNPD	93	75.625	ENSMALG00000016024	hnrnpd	86	80.479	Monopterus_albus
ENSGAGG00000003656	HNRNPD	87	94.576	MGP_CAROLIEiJ_G0027446	Hnrnpd	100	100.000	Mus_caroli
ENSGAGG00000003656	HNRNPD	87	96.949	ENSMUSG00000000568	Hnrnpd	100	100.000	Mus_musculus
ENSGAGG00000003656	HNRNPD	100	83.240	MGP_PahariEiJ_G0017224	Hnrnpd	100	100.000	Mus_pahari
ENSGAGG00000003656	HNRNPD	87	94.576	MGP_SPRETEiJ_G0028443	Hnrnpd	100	100.000	Mus_spretus
ENSGAGG00000003656	HNRNPD	81	97.112	ENSMPUG00000014782	HNRNPD	100	97.112	Mustela_putorius_furo
ENSGAGG00000003656	HNRNPD	87	90.508	ENSMLUG00000010628	HNRNPD	82	90.311	Myotis_lucifugus
ENSGAGG00000003656	HNRNPD	87	96.610	ENSNGAG00000013451	Hnrnpd	82	96.886	Nannospalax_galili
ENSGAGG00000003656	HNRNPD	93	75.625	ENSNBRG00000019548	hnrnpd	86	78.767	Neolamprologus_brichardi
ENSGAGG00000003656	HNRNPD	86	97.251	ENSNLEG00000008600	HNRNPD	81	97.232	Nomascus_leucogenys
ENSGAGG00000003656	HNRNPD	62	98.148	ENSMEUG00000006804	-	58	98.148	Notamacropus_eugenii
ENSGAGG00000003656	HNRNPD	87	89.153	ENSOPRG00000009336	HNRNPD	81	87.543	Ochotona_princeps
ENSGAGG00000003656	HNRNPD	87	96.610	ENSODEG00000001897	HNRNPD	86	96.886	Octodon_degus
ENSGAGG00000003656	HNRNPD	93	75.625	ENSONIG00000015390	hnrnpd	95	80.612	Oreochromis_niloticus
ENSGAGG00000003656	HNRNPD	80	98.444	ENSOANG00000001932	HNRNPD	100	98.444	Ornithorhynchus_anatinus
ENSGAGG00000003656	HNRNPD	81	97.112	ENSOCUG00000001357	HNRNPD	100	97.112	Oryctolagus_cuniculus
ENSGAGG00000003656	HNRNPD	93	74.763	ENSORLG00000001833	hnrnpd	86	78.893	Oryzias_latipes
ENSGAGG00000003656	HNRNPD	89	77.152	ENSORLG00020014780	hnrnpd	83	78.201	Oryzias_latipes_hni
ENSGAGG00000003656	HNRNPD	83	85.987	ENSORLG00015002382	hnrnpd	86	78.893	Oryzias_latipes_hsok
ENSGAGG00000003656	HNRNPD	93	69.085	ENSOMEG00000018558	hnrnpd	86	75.433	Oryzias_melastigma
ENSGAGG00000003656	HNRNPD	87	97.288	ENSOGAG00000004075	HNRNPD	81	97.232	Otolemur_garnettii
ENSGAGG00000003656	HNRNPD	81	97.112	ENSOARG00000000579	HNRNPD	100	97.112	Ovis_aries
ENSGAGG00000003656	HNRNPD	89	95.724	ENSPPAG00000035750	HNRNPD	100	98.515	Pan_paniscus
ENSGAGG00000003656	HNRNPD	87	97.288	ENSPPRG00000012258	HNRNPD	81	97.232	Panthera_pardus
ENSGAGG00000003656	HNRNPD	89	96.358	ENSPTIG00000019434	HNRNPD	99	96.358	Panthera_tigris_altaica
ENSGAGG00000003656	HNRNPD	87	97.288	ENSPTRG00000016215	HNRNPD	81	97.232	Pan_troglodytes
ENSGAGG00000003656	HNRNPD	87	97.288	ENSPANG00000011785	HNRNPD	81	97.232	Papio_anubis
ENSGAGG00000003656	HNRNPD	87	81.000	ENSPKIG00000025512	hnrnpd	87	79.795	Paramormyrops_kingsleyae
ENSGAGG00000003656	HNRNPD	80	100.000	ENSPSIG00000017029	HNRNPD	93	100.000	Pelodiscus_sinensis
ENSGAGG00000003656	HNRNPD	85	69.416	ENSPMGG00000017169	hnrnpd	64	82.258	Periophthalmus_magnuspinnatus
ENSGAGG00000003656	HNRNPD	82	96.786	ENSPEMG00000014804	Hnrnpd	88	96.786	Peromyscus_maniculatus_bairdii
ENSGAGG00000003656	HNRNPD	89	96.013	ENSPCIG00000003112	HNRNPD	82	93.464	Phascolarctos_cinereus
ENSGAGG00000003656	HNRNPD	93	70.938	ENSPFOG00000002596	hnrnpd	86	75.342	Poecilia_formosa
ENSGAGG00000003656	HNRNPD	93	74.062	ENSPLAG00000004297	hnrnpd	86	75.342	Poecilia_latipinna
ENSGAGG00000003656	HNRNPD	93	70.938	ENSPMEG00000000152	hnrnpd	86	75.342	Poecilia_mexicana
ENSGAGG00000003656	HNRNPD	86	81.992	ENSPREG00000018081	hnrnpd	95	77.395	Poecilia_reticulata
ENSGAGG00000003656	HNRNPD	52	82.677	ENSPPYG00000020411	-	77	82.114	Pongo_abelii
ENSGAGG00000003656	HNRNPD	87	97.288	ENSPPYG00000014885	HNRNPD	81	97.232	Pongo_abelii
ENSGAGG00000003656	HNRNPD	87	95.286	ENSPCAG00000002182	HNRNPD	82	95.517	Procavia_capensis
ENSGAGG00000003656	HNRNPD	87	97.288	ENSPCOG00000021331	HNRNPD	81	97.232	Propithecus_coquereli
ENSGAGG00000003656	HNRNPD	87	96.284	ENSPVAG00000000003	HNRNPD	81	95.848	Pteropus_vampyrus
ENSGAGG00000003656	HNRNPD	93	75.625	ENSPNYG00000004884	hnrnpd	86	74.658	Pundamilia_nyererei
ENSGAGG00000003656	HNRNPD	95	71.517	ENSPNAG00000016368	hnrnpd	87	75.779	Pygocentrus_nattereri
ENSGAGG00000003656	HNRNPD	88	94.966	ENSRNOG00000002292	Hnrnpd	82	95.848	Rattus_norvegicus
ENSGAGG00000003656	HNRNPD	87	97.288	ENSRBIG00000035345	HNRNPD	81	97.232	Rhinopithecus_bieti
ENSGAGG00000003656	HNRNPD	87	97.288	ENSRROG00000011888	HNRNPD	81	97.232	Rhinopithecus_roxellana
ENSGAGG00000003656	HNRNPD	87	96.949	ENSSBOG00000032881	HNRNPD	81	96.886	Saimiri_boliviensis_boliviensis
ENSGAGG00000003656	HNRNPD	81	97.112	ENSSHAG00000013312	HNRNPD	100	97.112	Sarcophilus_harrisii
ENSGAGG00000003656	HNRNPD	87	82.667	ENSSFOG00015005913	hnrnpd	87	79.452	Scleropages_formosus
ENSGAGG00000003656	HNRNPD	95	71.560	ENSSMAG00000009686	hnrnpd	86	75.768	Scophthalmus_maximus
ENSGAGG00000003656	HNRNPD	93	77.188	ENSSDUG00000010792	hnrnpd	86	77.055	Seriola_dumerili
ENSGAGG00000003656	HNRNPD	93	67.812	ENSSLDG00000015962	hnrnpd	86	73.630	Seriola_lalandi_dorsalis
ENSGAGG00000003656	HNRNPD	81	95.307	ENSSARG00000006883	HNRNPD	100	95.307	Sorex_araneus
ENSGAGG00000003656	HNRNPD	86	95.736	ENSSPUG00000013677	HNRNPD	100	94.163	Sphenodon_punctatus
ENSGAGG00000003656	HNRNPD	93	77.500	ENSSPAG00000021014	hnrnpd	86	79.795	Stegastes_partitus
ENSGAGG00000003656	HNRNPD	87	97.288	ENSSSCG00000009249	HNRNPD	81	97.232	Sus_scrofa
ENSGAGG00000003656	HNRNPD	85	92.734	ENSTGUG00000002858	HNRNPD	88	92.734	Taeniopygia_guttata
ENSGAGG00000003656	HNRNPD	93	70.755	ENSTRUG00000018450	hnrnpd	86	73.103	Takifugu_rubripes
ENSGAGG00000003656	HNRNPD	75	70.817	ENSTNIG00000013499	hnrnpd	78	87.166	Tetraodon_nigroviridis
ENSGAGG00000003656	HNRNPD	81	92.058	ENSTBEG00000002327	HNRNPD	100	92.058	Tupaia_belangeri
ENSGAGG00000003656	HNRNPD	87	97.288	ENSTTRG00000007592	HNRNPD	81	97.232	Tursiops_truncatus
ENSGAGG00000003656	HNRNPD	98	84.639	ENSUAMG00000011374	HNRNPD	76	96.071	Ursus_americanus
ENSGAGG00000003656	HNRNPD	92	87.346	ENSUMAG00000008685	HNRNPD	84	97.112	Ursus_maritimus
ENSGAGG00000003656	HNRNPD	86	98.837	ENSVPAG00000004374	HNRNPD	100	98.837	Vicugna_pacos
ENSGAGG00000003656	HNRNPD	87	97.288	ENSVVUG00000024658	HNRNPD	81	97.232	Vulpes_vulpes
ENSGAGG00000003656	HNRNPD	86	79.322	ENSXETG00000012569	hnrnpd	91	77.509	Xenopus_tropicalis
ENSGAGG00000003656	HNRNPD	86	82.692	ENSXCOG00000017639	hnrnpd	100	78.462	Xiphophorus_couchianus
ENSGAGG00000003656	HNRNPD	90	76.299	ENSXMAG00000019151	hnrnpd	86	75.000	Xiphophorus_maculatus