EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000003689 (Gene tree)
Gene ID: -
Gene Symbol: RCL1
Alias: RNAC|RPCL1
Full Name: RNA terminal phosphate cyclase like 1
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 47464 bases
Position: chrPPEB01003728.1:113653-161116
Accession: 17687
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000004456	RTC	PF01137.21	8.7e-62	1	1
ENSGAGP00000004456	RTC_insert	PF05189.13	5e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000005225	RCL1-201	1533	-	ENSGAGP00000004456	373 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000003689's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000003689's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000003689	RCL1	100	89.812	ENSG00000120158	RCL1	100	90.233	Homo_sapiens
ENSGAGG00000003689	RCL1	100	76.203	ENSAPOG00000015666	rcl1	100	76.203	Acanthochromis_polyacanthus
ENSGAGG00000003689	RCL1	100	89.544	ENSAMEG00000002631	RCL1	100	89.544	Ailuropoda_melanoleuca
ENSGAGG00000003689	RCL1	100	77.005	ENSACIG00000021195	rcl1	100	77.005	Amphilophus_citrinellus
ENSGAGG00000003689	RCL1	100	75.401	ENSAOCG00000002223	rcl1	100	75.401	Amphiprion_ocellaris
ENSGAGG00000003689	RCL1	100	75.668	ENSAPEG00000006905	rcl1	100	75.668	Amphiprion_percula
ENSGAGG00000003689	RCL1	100	74.599	ENSATEG00000020026	rcl1	100	74.599	Anabas_testudineus
ENSGAGG00000003689	RCL1	88	89.329	ENSAPLG00000006031	RCL1	100	89.329	Anas_platyrhynchos
ENSGAGG00000003689	RCL1	100	87.399	ENSACAG00000003640	RCL1	100	87.399	Anolis_carolinensis
ENSGAGG00000003689	RCL1	100	89.008	ENSANAG00000037372	RCL1	100	89.008	Aotus_nancymaae
ENSGAGG00000003689	RCL1	100	75.936	ENSACLG00000021724	rcl1	100	75.936	Astatotilapia_calliptera
ENSGAGG00000003689	RCL1	98	77.717	ENSAMXG00000033394	rcl1	99	77.717	Astyanax_mexicanus
ENSGAGG00000003689	RCL1	98	45.333	WBGene00022852	ZK1127.5	99	45.333	Caenorhabditis_elegans
ENSGAGG00000003689	RCL1	100	89.544	ENSCJAG00000011202	RCL1	100	89.544	Callithrix_jacchus
ENSGAGG00000003689	RCL1	100	89.544	ENSCAFG00000002091	RCL1	100	89.544	Canis_familiaris
ENSGAGG00000003689	RCL1	100	89.812	ENSCAFG00020000638	RCL1	78	89.812	Canis_lupus_dingo
ENSGAGG00000003689	RCL1	100	89.276	ENSCHIG00000012407	RCL1	100	89.276	Capra_hircus
ENSGAGG00000003689	RCL1	88	89.908	ENSTSYG00000009592	RCL1	97	89.503	Carlito_syrichta
ENSGAGG00000003689	RCL1	68	73.410	ENSCAPG00000013575	RCL1	100	73.410	Cavia_aperea
ENSGAGG00000003689	RCL1	100	89.008	ENSCPOG00000015354	RCL1	100	89.008	Cavia_porcellus
ENSGAGG00000003689	RCL1	100	89.544	ENSCCAG00000033505	RCL1	100	89.544	Cebus_capucinus
ENSGAGG00000003689	RCL1	100	89.008	ENSCATG00000034721	RCL1	100	89.008	Cercocebus_atys
ENSGAGG00000003689	RCL1	100	87.936	ENSCLAG00000007445	RCL1	100	87.936	Chinchilla_lanigera
ENSGAGG00000003689	RCL1	100	89.544	ENSCSAG00000008811	RCL1	100	89.544	Chlorocebus_sabaeus
ENSGAGG00000003689	RCL1	87	75.232	ENSCHOG00000007216	RCL1	100	75.232	Choloepus_hoffmanni
ENSGAGG00000003689	RCL1	100	98.123	ENSCPBG00000025481	RCL1	94	97.872	Chrysemys_picta_bellii
ENSGAGG00000003689	RCL1	98	58.760	ENSCING00000019565	-	98	58.760	Ciona_intestinalis
ENSGAGG00000003689	RCL1	95	30.387	ENSCSAVG00000007269	-	95	30.387	Ciona_savignyi
ENSGAGG00000003689	RCL1	100	89.544	ENSCANG00000027099	RCL1	100	89.544	Colobus_angolensis_palliatus
ENSGAGG00000003689	RCL1	100	88.472	ENSCGRG00001013748	Rcl1	100	88.472	Cricetulus_griseus_chok1gshd
ENSGAGG00000003689	RCL1	88	89.024	ENSCGRG00000005843	Rcl1	99	89.024	Cricetulus_griseus_crigri
ENSGAGG00000003689	RCL1	100	77.005	ENSCSEG00000000712	rcl1	98	77.005	Cynoglossus_semilaevis
ENSGAGG00000003689	RCL1	100	76.738	ENSCVAG00000011536	rcl1	100	76.738	Cyprinodon_variegatus
ENSGAGG00000003689	RCL1	98	74.387	ENSDARG00000038312	rcl1	100	74.387	Danio_rerio
ENSGAGG00000003689	RCL1	71	89.057	ENSDNOG00000019911	RCL1	100	89.057	Dasypus_novemcinctus
ENSGAGG00000003689	RCL1	100	88.204	ENSDORG00000015645	Rcl1	100	88.204	Dipodomys_ordii
ENSGAGG00000003689	RCL1	99	53.158	FBgn0020909	Rtc1	99	53.158	Drosophila_melanogaster
ENSGAGG00000003689	RCL1	72	91.304	ENSETEG00000014087	-	82	91.304	Echinops_telfairi
ENSGAGG00000003689	RCL1	100	53.333	ENSEBUG00000016621	-	100	53.333	Eptatretus_burgeri
ENSGAGG00000003689	RCL1	100	89.544	ENSEASG00005010653	RCL1	100	89.544	Equus_asinus_asinus
ENSGAGG00000003689	RCL1	100	89.544	ENSECAG00000015973	RCL1	100	89.544	Equus_caballus
ENSGAGG00000003689	RCL1	100	76.139	ENSEEUG00000009801	RCL1	100	76.139	Erinaceus_europaeus
ENSGAGG00000003689	RCL1	100	73.797	ENSELUG00000007353	rcl1	100	73.797	Esox_lucius
ENSGAGG00000003689	RCL1	100	89.008	ENSFCAG00000014557	RCL1	100	89.008	Felis_catus
ENSGAGG00000003689	RCL1	95	83.662	ENSFALG00000010553	RCL1	94	83.662	Ficedula_albicollis
ENSGAGG00000003689	RCL1	88	87.768	ENSFDAG00000004209	RCL1	100	87.768	Fukomys_damarensis
ENSGAGG00000003689	RCL1	100	76.738	ENSFHEG00000011228	rcl1	100	76.738	Fundulus_heteroclitus
ENSGAGG00000003689	RCL1	99	75.610	ENSGMOG00000004677	rcl1	99	75.610	Gadus_morhua
ENSGAGG00000003689	RCL1	99	89.130	ENSGALG00000015024	RCL1	98	89.130	Gallus_gallus
ENSGAGG00000003689	RCL1	100	75.401	ENSGAFG00000007257	rcl1	100	75.401	Gambusia_affinis
ENSGAGG00000003689	RCL1	100	75.134	ENSGACG00000017474	rcl1	100	75.134	Gasterosteus_aculeatus
ENSGAGG00000003689	RCL1	100	89.812	ENSGGOG00000015041	RCL1	100	89.812	Gorilla_gorilla
ENSGAGG00000003689	RCL1	100	76.203	ENSHBUG00000001393	rcl1	100	76.203	Haplochromis_burtoni
ENSGAGG00000003689	RCL1	100	75.067	ENSHGLG00000005368	-	100	75.067	Heterocephalus_glaber_female
ENSGAGG00000003689	RCL1	100	88.204	ENSHGLG00000016452	RCL1	100	88.204	Heterocephalus_glaber_female
ENSGAGG00000003689	RCL1	100	76.139	ENSHGLG00100018010	-	100	76.139	Heterocephalus_glaber_male
ENSGAGG00000003689	RCL1	100	82.038	ENSHGLG00100008718	-	100	82.038	Heterocephalus_glaber_male
ENSGAGG00000003689	RCL1	100	75.668	ENSHCOG00000020170	rcl1	100	75.668	Hippocampus_comes
ENSGAGG00000003689	RCL1	98	77.446	ENSIPUG00000018054	RCL1	99	77.446	Ictalurus_punctatus
ENSGAGG00000003689	RCL1	100	88.740	ENSSTOG00000000023	RCL1	100	88.740	Ictidomys_tridecemlineatus
ENSGAGG00000003689	RCL1	54	65.672	ENSJJAG00000000764	-	98	65.672	Jaculus_jaculus
ENSGAGG00000003689	RCL1	100	87.936	ENSJJAG00000022803	-	100	87.936	Jaculus_jaculus
ENSGAGG00000003689	RCL1	100	77.480	ENSJJAG00000015632	-	100	77.480	Jaculus_jaculus
ENSGAGG00000003689	RCL1	98	75.749	ENSKMAG00000011946	rcl1	99	75.749	Kryptolebias_marmoratus
ENSGAGG00000003689	RCL1	100	72.995	ENSLBEG00000003957	rcl1	100	72.995	Labrus_bergylta
ENSGAGG00000003689	RCL1	90	79.228	ENSLACG00000004594	RCL1	98	82.965	Latimeria_chalumnae
ENSGAGG00000003689	RCL1	100	82.306	ENSLOCG00000010148	rcl1	98	82.306	Lepisosteus_oculatus
ENSGAGG00000003689	RCL1	100	86.327	ENSLAFG00000017495	RCL1	100	86.327	Loxodonta_africana
ENSGAGG00000003689	RCL1	100	89.544	ENSMFAG00000037906	RCL1	100	89.544	Macaca_fascicularis
ENSGAGG00000003689	RCL1	100	89.544	ENSMNEG00000012288	RCL1	100	89.544	Macaca_nemestrina
ENSGAGG00000003689	RCL1	100	89.544	ENSMLEG00000043088	RCL1	100	89.544	Mandrillus_leucophaeus
ENSGAGG00000003689	RCL1	100	76.471	ENSMAMG00000008311	rcl1	100	76.471	Mastacembelus_armatus
ENSGAGG00000003689	RCL1	100	75.936	ENSMZEG00005017292	rcl1	100	75.936	Maylandia_zebra
ENSGAGG00000003689	RCL1	58	84.932	ENSMGAG00000002245	RCL1	100	84.932	Meleagris_gallopavo
ENSGAGG00000003689	RCL1	58	88.837	ENSMAUG00000008922	Rcl1	100	88.837	Mesocricetus_auratus
ENSGAGG00000003689	RCL1	100	88.472	ENSMICG00000015562	RCL1	100	88.472	Microcebus_murinus
ENSGAGG00000003689	RCL1	100	89.008	ENSMOCG00000012145	Rcl1	100	89.008	Microtus_ochrogaster
ENSGAGG00000003689	RCL1	100	73.333	ENSMMOG00000021264	rcl1	100	73.333	Mola_mola
ENSGAGG00000003689	RCL1	95	89.014	ENSMODG00000015377	RCL1	94	89.014	Monodelphis_domestica
ENSGAGG00000003689	RCL1	100	74.866	ENSMALG00000018618	rcl1	100	74.866	Monopterus_albus
ENSGAGG00000003689	RCL1	100	89.008	MGP_CAROLIEiJ_G0022853	Rcl1	100	89.008	Mus_caroli
ENSGAGG00000003689	RCL1	100	89.008	ENSMUSG00000024785	Rcl1	100	89.008	Mus_musculus
ENSGAGG00000003689	RCL1	100	89.544	MGP_PahariEiJ_G0014346	Rcl1	100	91.765	Mus_pahari
ENSGAGG00000003689	RCL1	100	89.008	MGP_SPRETEiJ_G0023771	Rcl1	100	91.176	Mus_spretus
ENSGAGG00000003689	RCL1	100	88.740	ENSMPUG00000004998	RCL1	100	88.740	Mustela_putorius_furo
ENSGAGG00000003689	RCL1	100	88.472	ENSMLUG00000009654	RCL1	100	88.472	Myotis_lucifugus
ENSGAGG00000003689	RCL1	100	88.204	ENSNGAG00000015327	Rcl1	100	88.204	Nannospalax_galili
ENSGAGG00000003689	RCL1	92	74.636	ENSNBRG00000019854	rcl1	96	72.346	Neolamprologus_brichardi
ENSGAGG00000003689	RCL1	100	86.863	ENSNLEG00000008891	RCL1	100	86.863	Nomascus_leucogenys
ENSGAGG00000003689	RCL1	100	83.646	ENSMEUG00000007653	RCL1	100	83.646	Notamacropus_eugenii
ENSGAGG00000003689	RCL1	100	89.276	ENSOPRG00000010965	RCL1	100	89.276	Ochotona_princeps
ENSGAGG00000003689	RCL1	88	73.795	ENSODEG00000004151	RCL1	96	73.795	Octodon_degus
ENSGAGG00000003689	RCL1	100	76.471	ENSONIG00000003871	rcl1	100	76.471	Oreochromis_niloticus
ENSGAGG00000003689	RCL1	67	85.771	ENSOANG00000013193	-	100	85.771	Ornithorhynchus_anatinus
ENSGAGG00000003689	RCL1	100	89.812	ENSOCUG00000008161	RCL1	100	89.812	Oryctolagus_cuniculus
ENSGAGG00000003689	RCL1	100	74.599	ENSORLG00000010443	rcl1	100	74.599	Oryzias_latipes
ENSGAGG00000003689	RCL1	100	74.599	ENSORLG00020012211	rcl1	100	74.599	Oryzias_latipes_hni
ENSGAGG00000003689	RCL1	100	74.332	ENSORLG00015001122	rcl1	100	74.332	Oryzias_latipes_hsok
ENSGAGG00000003689	RCL1	100	75.668	ENSOMEG00000022976	rcl1	88	75.668	Oryzias_melastigma
ENSGAGG00000003689	RCL1	100	87.936	ENSOGAG00000007480	RCL1	100	87.936	Otolemur_garnettii
ENSGAGG00000003689	RCL1	100	89.008	ENSOARG00000013463	RCL1	100	89.008	Ovis_aries
ENSGAGG00000003689	RCL1	100	90.080	ENSPPAG00000037958	RCL1	100	90.080	Pan_paniscus
ENSGAGG00000003689	RCL1	100	88.204	ENSPPRG00000022645	RCL1	100	88.204	Panthera_pardus
ENSGAGG00000003689	RCL1	87	89.571	ENSPTIG00000019031	RCL1	100	88.837	Panthera_tigris_altaica
ENSGAGG00000003689	RCL1	100	89.812	ENSPTRG00000020743	RCL1	100	89.812	Pan_troglodytes
ENSGAGG00000003689	RCL1	100	89.544	ENSPANG00000025151	RCL1	100	89.544	Papio_anubis
ENSGAGG00000003689	RCL1	100	77.005	ENSPKIG00000021022	rcl1	100	77.005	Paramormyrops_kingsleyae
ENSGAGG00000003689	RCL1	88	95.732	ENSPSIG00000012302	RCL1	100	95.732	Pelodiscus_sinensis
ENSGAGG00000003689	RCL1	100	74.866	ENSPMGG00000024007	rcl1	100	74.866	Periophthalmus_magnuspinnatus
ENSGAGG00000003689	RCL1	100	89.276	ENSPEMG00000023275	Rcl1	100	89.276	Peromyscus_maniculatus_bairdii
ENSGAGG00000003689	RCL1	95	31.215	ENSPMAG00000009110	rtca	95	31.215	Petromyzon_marinus
ENSGAGG00000003689	RCL1	100	89.812	ENSPCIG00000000188	RCL1	100	89.812	Phascolarctos_cinereus
ENSGAGG00000003689	RCL1	100	75.936	ENSPFOG00000019682	rcl1	99	75.936	Poecilia_formosa
ENSGAGG00000003689	RCL1	100	75.936	ENSPLAG00000022354	rcl1	100	75.936	Poecilia_latipinna
ENSGAGG00000003689	RCL1	100	75.936	ENSPMEG00000008131	rcl1	100	75.936	Poecilia_mexicana
ENSGAGG00000003689	RCL1	100	75.668	ENSPREG00000008032	rcl1	100	75.668	Poecilia_reticulata
ENSGAGG00000003689	RCL1	100	89.544	ENSPPYG00000019244	RCL1	100	89.544	Pongo_abelii
ENSGAGG00000003689	RCL1	100	79.088	ENSPCAG00000001440	RCL1	100	79.088	Procavia_capensis
ENSGAGG00000003689	RCL1	100	89.812	ENSPCOG00000009611	RCL1	100	89.812	Propithecus_coquereli
ENSGAGG00000003689	RCL1	100	89.544	ENSPVAG00000015752	RCL1	100	89.544	Pteropus_vampyrus
ENSGAGG00000003689	RCL1	100	75.936	ENSPNYG00000012910	rcl1	100	75.936	Pundamilia_nyererei
ENSGAGG00000003689	RCL1	99	76.408	ENSPNAG00000028307	rcl1	92	76.408	Pygocentrus_nattereri
ENSGAGG00000003689	RCL1	100	88.204	ENSRNOG00000015491	Rcl1	100	88.204	Rattus_norvegicus
ENSGAGG00000003689	RCL1	100	89.276	ENSRBIG00000035818	RCL1	100	89.276	Rhinopithecus_bieti
ENSGAGG00000003689	RCL1	100	89.544	ENSRROG00000029781	RCL1	100	89.544	Rhinopithecus_roxellana
ENSGAGG00000003689	RCL1	98	38.315	YOL010W	-	97	38.315	Saccharomyces_cerevisiae
ENSGAGG00000003689	RCL1	100	89.276	ENSSBOG00000026369	RCL1	100	89.276	Saimiri_boliviensis_boliviensis
ENSGAGG00000003689	RCL1	88	88.788	ENSSHAG00000014086	RCL1	100	88.788	Sarcophilus_harrisii
ENSGAGG00000003689	RCL1	100	77.807	ENSSFOG00015023020	rcl1	100	77.807	Scleropages_formosus
ENSGAGG00000003689	RCL1	100	75.936	ENSSMAG00000019751	rcl1	86	75.936	Scophthalmus_maximus
ENSGAGG00000003689	RCL1	100	75.936	ENSSDUG00000006349	rcl1	100	75.936	Seriola_dumerili
ENSGAGG00000003689	RCL1	100	76.203	ENSSLDG00000022076	rcl1	100	76.203	Seriola_lalandi_dorsalis
ENSGAGG00000003689	RCL1	100	88.204	ENSSARG00000009260	RCL1	100	88.204	Sorex_araneus
ENSGAGG00000003689	RCL1	100	91.421	ENSSPUG00000016330	RCL1	100	91.421	Sphenodon_punctatus
ENSGAGG00000003689	RCL1	100	76.738	ENSSPAG00000018038	rcl1	100	76.738	Stegastes_partitus
ENSGAGG00000003689	RCL1	100	89.812	ENSSSCG00000005217	RCL1	83	89.812	Sus_scrofa
ENSGAGG00000003689	RCL1	100	87.200	ENSTGUG00000005138	RCL1	100	87.200	Taeniopygia_guttata
ENSGAGG00000003689	RCL1	99	73.984	ENSTRUG00000010493	rcl1	99	73.984	Takifugu_rubripes
ENSGAGG00000003689	RCL1	99	73.514	ENSTNIG00000013214	rcl1	99	73.514	Tetraodon_nigroviridis
ENSGAGG00000003689	RCL1	100	83.378	ENSTBEG00000016339	RCL1	100	83.378	Tupaia_belangeri
ENSGAGG00000003689	RCL1	100	88.740	ENSTTRG00000016525	RCL1	100	88.740	Tursiops_truncatus
ENSGAGG00000003689	RCL1	100	89.544	ENSUAMG00000005598	RCL1	100	89.815	Ursus_americanus
ENSGAGG00000003689	RCL1	88	89.297	ENSUMAG00000017890	RCL1	97	89.297	Ursus_maritimus
ENSGAGG00000003689	RCL1	88	90.520	ENSVPAG00000009188	RCL1	100	90.520	Vicugna_pacos
ENSGAGG00000003689	RCL1	88	90.549	ENSVVUG00000007304	RCL1	89	90.549	Vulpes_vulpes
ENSGAGG00000003689	RCL1	100	74.599	ENSXETG00000000592	rcl1	100	74.599	Xenopus_tropicalis
ENSGAGG00000003689	RCL1	57	31.628	ENSXCOG00000008002	rtca	62	31.628	Xiphophorus_couchianus
ENSGAGG00000003689	RCL1	100	75.936	ENSXCOG00000004922	rcl1	100	75.936	Xiphophorus_couchianus
ENSGAGG00000003689	RCL1	100	75.936	ENSXMAG00000022366	RCL1	100	75.936	Xiphophorus_maculatus