EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000003839 (Gene tree)
Gene ID: -
Gene Symbol: FAM172A
Alias: C5orf21|DKFZP564D172|Toupee
Full Name: family with sequence similarity 172 member A
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 299543 bases
Position: chrPPEB01001442.1:34494-334036
Accession: 25365
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000004652	Arb2	PF09757.9	9.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000005451	FAM172A-202	1977	-	ENSGAGP00000004655	377 (aa)	-	-
ENSGAGT00000005458	FAM172A-203	1875	-	ENSGAGP00000004662	343 (aa)	-	-
ENSGAGT00000005448	FAM172A-201	2094	-	ENSGAGP00000004652	416 (aa)	-	-
ENSGAGT00000005461	FAM172A-204	1482	-	ENSGAGP00000004665	155 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000003839's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000003839's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000003839	FAM172A	81	45.058	ENSGAGG00000022828	-	89	45.058

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000003839	FAM172A	97	92.079	ENSG00000113391	FAM172A	100	93.671	Homo_sapiens
ENSGAGG00000003839	FAM172A	52	38.813	ENSAPLG00000011555	-	91	38.813	Anas_platyrhynchos
ENSGAGG00000003839	FAM172A	100	92.308	ENSAPLG00000004055	FAM172A	100	92.308	Anas_platyrhynchos
ENSGAGG00000003839	FAM172A	91	92.063	ENSACAG00000013305	FAM172A	98	92.063	Anolis_carolinensis
ENSGAGG00000003839	FAM172A	86	86.872	ENSANAG00000035869	FAM172A	93	84.840	Aotus_nancymaae
ENSGAGG00000003839	FAM172A	97	91.089	ENSBTAG00000050195	FAM172A	100	90.144	Bos_taurus
ENSGAGG00000003839	FAM172A	97	91.832	ENSCJAG00000010444	FAM172A	100	90.865	Callithrix_jacchus
ENSGAGG00000003839	FAM172A	86	93.017	ENSCAFG00000008064	FAM172A	99	91.892	Canis_familiaris
ENSGAGG00000003839	FAM172A	97	91.337	ENSCAFG00020006210	FAM172A	100	90.385	Canis_lupus_dingo
ENSGAGG00000003839	FAM172A	97	91.089	ENSCHIG00000008440	FAM172A	100	90.144	Capra_hircus
ENSGAGG00000003839	FAM172A	64	91.353	ENSTSYG00000006286	FAM172A	85	91.353	Carlito_syrichta
ENSGAGG00000003839	FAM172A	54	84.071	ENSCAPG00000014103	-	100	84.071	Cavia_aperea
ENSGAGG00000003839	FAM172A	97	91.337	ENSCCAG00000023116	FAM172A	100	90.811	Cebus_capucinus
ENSGAGG00000003839	FAM172A	100	82.692	ENSCLAG00000005472	FAM172A	100	93.671	Chinchilla_lanigera
ENSGAGG00000003839	FAM172A	84	44.382	ENSCPBG00000004402	-	92	44.382	Chrysemys_picta_bellii
ENSGAGG00000003839	FAM172A	65	91.111	ENSCANG00000040412	FAM172A	92	91.111	Colobus_angolensis_palliatus
ENSGAGG00000003839	FAM172A	97	90.842	ENSDNOG00000004689	FAM172A	100	89.904	Dasypus_novemcinctus
ENSGAGG00000003839	FAM172A	65	90.741	ENSDORG00000013558	Fam172a	88	90.741	Dipodomys_ordii
ENSGAGG00000003839	FAM172A	85	39.130	ENSEBUG00000016097	-	70	39.130	Eptatretus_burgeri
ENSGAGG00000003839	FAM172A	97	89.851	ENSECAG00000018274	FAM172A	100	88.942	Equus_caballus
ENSGAGG00000003839	FAM172A	96	79.250	ENSEEUG00000002887	FAM172A	100	78.125	Erinaceus_europaeus
ENSGAGG00000003839	FAM172A	99	66.348	ENSELUG00000017647	fam172a	99	66.348	Esox_lucius
ENSGAGG00000003839	FAM172A	97	91.089	ENSFCAG00000025443	FAM172A	100	90.144	Felis_catus
ENSGAGG00000003839	FAM172A	88	92.643	ENSFALG00000009072	FAM172A	99	92.643	Ficedula_albicollis
ENSGAGG00000003839	FAM172A	81	44.675	ENSFALG00000006501	-	94	44.675	Ficedula_albicollis
ENSGAGG00000003839	FAM172A	100	93.029	ENSGALG00000014661	FAM172A	100	93.029	Gallus_gallus
ENSGAGG00000003839	FAM172A	97	91.584	ENSGGOG00000010296	FAM172A	100	90.625	Gorilla_gorilla
ENSGAGG00000003839	FAM172A	97	90.099	ENSHGLG00000011178	FAM172A	100	94.937	Heterocephalus_glaber_female
ENSGAGG00000003839	FAM172A	86	92.437	ENSHGLG00100013340	FAM172A	100	94.937	Heterocephalus_glaber_male
ENSGAGG00000003839	FAM172A	97	90.594	ENSSTOG00000009918	FAM172A	100	89.663	Ictidomys_tridecemlineatus
ENSGAGG00000003839	FAM172A	83	49.138	ENSLACG00000001532	si:ch73-41e3.7	92	49.138	Latimeria_chalumnae
ENSGAGG00000003839	FAM172A	100	76.850	ENSLOCG00000001629	fam172a	100	77.566	Lepisosteus_oculatus
ENSGAGG00000003839	FAM172A	65	91.111	ENSMFAG00000001171	FAM172A	92	91.111	Macaca_fascicularis
ENSGAGG00000003839	FAM172A	92	91.601	ENSMNEG00000039938	FAM172A	92	91.111	Macaca_nemestrina
ENSGAGG00000003839	FAM172A	100	90.625	ENSMICG00000030403	FAM172A	100	90.625	Microcebus_murinus
ENSGAGG00000003839	FAM172A	89	88.649	ENSMOCG00000003613	Fam172a	100	88.649	Microtus_ochrogaster
ENSGAGG00000003839	FAM172A	100	91.587	ENSMODG00000020131	FAM172A	100	91.587	Monodelphis_domestica
ENSGAGG00000003839	FAM172A	89	61.892	MGP_PahariEiJ_G0015818	Fam172a	100	61.892	Mus_pahari
ENSGAGG00000003839	FAM172A	89	91.081	ENSNGAG00000019570	Fam172a	100	91.081	Nannospalax_galili
ENSGAGG00000003839	FAM172A	65	91.111	ENSNLEG00000013903	FAM172A	89	91.111	Nomascus_leucogenys
ENSGAGG00000003839	FAM172A	89	91.892	ENSOANG00000011068	FAM172A	99	91.892	Ornithorhynchus_anatinus
ENSGAGG00000003839	FAM172A	94	91.349	ENSOCUG00000007299	FAM172A	96	90.370	Oryctolagus_cuniculus
ENSGAGG00000003839	FAM172A	97	90.347	ENSOGAG00000015189	FAM172A	100	89.423	Otolemur_garnettii
ENSGAGG00000003839	FAM172A	89	89.488	ENSOARG00000016711	FAM172A	87	88.512	Ovis_aries
ENSGAGG00000003839	FAM172A	65	90.741	ENSPPAG00000030542	FAM172A	92	90.741	Pan_paniscus
ENSGAGG00000003839	FAM172A	97	91.089	ENSPPRG00000006653	FAM172A	100	90.144	Panthera_pardus
ENSGAGG00000003839	FAM172A	97	91.089	ENSPTIG00000012681	FAM172A	100	90.144	Panthera_tigris_altaica
ENSGAGG00000003839	FAM172A	65	90.741	ENSPTRG00000017074	FAM172A	92	90.741	Pan_troglodytes
ENSGAGG00000003839	FAM172A	65	91.111	ENSPANG00000011687	FAM172A	92	91.111	Papio_anubis
ENSGAGG00000003839	FAM172A	94	74.619	ENSPKIG00000012314	fam172a	98	82.105	Paramormyrops_kingsleyae
ENSGAGG00000003839	FAM172A	100	88.462	ENSPEMG00000009604	-	100	91.139	Peromyscus_maniculatus_bairdii
ENSGAGG00000003839	FAM172A	100	91.106	ENSPCIG00000028612	FAM172A	100	91.106	Phascolarctos_cinereus
ENSGAGG00000003839	FAM172A	55	89.520	ENSPCOG00000024072	FAM172A	93	89.520	Propithecus_coquereli
ENSGAGG00000003839	FAM172A	65	87.732	ENSRNOG00000013844	Fam172a	99	87.732	Rattus_norvegicus
ENSGAGG00000003839	FAM172A	65	91.111	ENSRROG00000023807	FAM172A	92	91.111	Rhinopithecus_roxellana
ENSGAGG00000003839	FAM172A	97	91.832	ENSSBOG00000019860	FAM172A	100	90.865	Saimiri_boliviensis_boliviensis
ENSGAGG00000003839	FAM172A	100	91.587	ENSSHAG00000013743	FAM172A	100	91.587	Sarcophilus_harrisii
ENSGAGG00000003839	FAM172A	100	92.308	ENSSPUG00000008161	FAM172A	100	92.308	Sphenodon_punctatus
ENSGAGG00000003839	FAM172A	100	90.144	ENSSSCG00000027608	FAM172A	100	91.081	Sus_scrofa
ENSGAGG00000003839	FAM172A	80	46.726	ENSTGUG00000013623	-	100	46.726	Taeniopygia_guttata
ENSGAGG00000003839	FAM172A	91	92.895	ENSTGUG00000000715	FAM172A	100	92.895	Taeniopygia_guttata
ENSGAGG00000003839	FAM172A	79	56.886	ENSTNIG00000009902	fam172a	100	58.929	Tetraodon_nigroviridis
ENSGAGG00000003839	FAM172A	100	86.779	ENSTTRG00000001521	FAM172A	100	86.779	Tursiops_truncatus
ENSGAGG00000003839	FAM172A	97	91.584	ENSUMAG00000005442	FAM172A	100	90.625	Ursus_maritimus
ENSGAGG00000003839	FAM172A	97	91.337	ENSVVUG00000022112	FAM172A	100	90.385	Vulpes_vulpes
ENSGAGG00000003839	FAM172A	99	82.850	ENSXETG00000011592	fam172a	100	81.991	Xenopus_tropicalis
ENSGAGG00000003839	FAM172A	91	42.416	ENSXETG00000033027	-	99	42.416	Xenopus_tropicalis