EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000003871 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 15758 bases
Position: chrPPEB01004532.1:55584-71341
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000004707	AF-4	PF05110.13	1.3e-68	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000005514	-	1071	-	ENSGAGP00000004707	356 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000003871's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000003871's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000003871	-	74	38.983	ENSGAGG00000024556	-	81	39.661

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000003871	-	76	40.984	ENSG00000155966	AFF2	67	39.000	Homo_sapiens
ENSGAGG00000003871	-	92	36.963	ENSG00000072364	AFF4	64	53.608	Homo_sapiens
ENSGAGG00000003871	-	76	63.406	ENSG00000144218	AFF3	82	82.243	Homo_sapiens
ENSGAGG00000003871	-	76	69.565	ENSAMEG00000015682	-	87	69.565	Ailuropoda_melanoleuca
ENSGAGG00000003871	-	70	32.707	ENSACIG00000021066	-	73	32.707	Amphilophus_citrinellus
ENSGAGG00000003871	-	76	76.190	ENSAPLG00000016085	-	85	76.923	Anas_platyrhynchos
ENSGAGG00000003871	-	76	40.333	ENSTSYG00000036097	-	84	40.468	Carlito_syrichta
ENSGAGG00000003871	-	92	36.182	ENSCPOG00000001814	AFF4	78	51.546	Cavia_porcellus
ENSGAGG00000003871	-	76	60.507	ENSCPOG00000006346	AFF3	71	83.784	Cavia_porcellus
ENSGAGG00000003871	-	92	36.963	ENSCCAG00000030353	AFF4	76	39.298	Cebus_capucinus
ENSGAGG00000003871	-	76	62.319	ENSCLAG00000017100	AFF3	71	85.135	Chinchilla_lanigera
ENSGAGG00000003871	-	78	40.418	ENSCPBG00000016549	-	78	40.767	Chrysemys_picta_bellii
ENSGAGG00000003871	-	76	61.232	ENSCGRG00000003408	Aff3	71	83.784	Cricetulus_griseus_crigri
ENSGAGG00000003871	-	76	67.857	ENSDNOG00000047074	-	80	67.857	Dasypus_novemcinctus
ENSGAGG00000003871	-	76	61.957	ENSDORG00000007294	Aff3	71	85.135	Dipodomys_ordii
ENSGAGG00000003871	-	76	66.052	ENSFALG00000003872	-	86	66.052	Ficedula_albicollis
ENSGAGG00000003871	-	76	63.406	ENSSTOG00000012140	AFF3	66	86.486	Ictidomys_tridecemlineatus
ENSGAGG00000003871	-	78	39.858	ENSSTOG00000026695	AFF4	78	53.608	Ictidomys_tridecemlineatus
ENSGAGG00000003871	-	76	61.957	ENSJJAG00000013155	Aff3	71	83.784	Jaculus_jaculus
ENSGAGG00000003871	-	75	40.614	ENSLACG00000008183	-	66	40.404	Latimeria_chalumnae
ENSGAGG00000003871	-	76	56.934	ENSLACG00000003828	-	82	56.934	Latimeria_chalumnae
ENSGAGG00000003871	-	76	39.203	ENSLAFG00000018691	AFF2	91	39.000	Loxodonta_africana
ENSGAGG00000003871	-	74	37.918	ENSMZEG00005005467	-	71	37.918	Maylandia_zebra
ENSGAGG00000003871	-	76	66.667	ENSMGAG00000014794	-	81	67.528	Meleagris_gallopavo
ENSGAGG00000003871	-	75	40.000	ENSMGAG00000008263	-	98	39.931	Meleagris_gallopavo
ENSGAGG00000003871	-	78	37.895	ENSMICG00000030374	-	79	38.246	Microcebus_murinus
ENSGAGG00000003871	-	78	32.881	ENSMMOG00000002118	-	80	32.203	Mola_mola
ENSGAGG00000003871	-	76	68.000	ENSMODG00000001458	-	81	68.000	Monodelphis_domestica
ENSGAGG00000003871	-	76	61.594	ENSMUSG00000037138	Aff3	60	83.784	Mus_musculus
ENSGAGG00000003871	-	78	38.947	MGP_PahariEiJ_G0017466	Aff4	78	53.608	Mus_pahari
ENSGAGG00000003871	-	76	64.130	ENSNGAG00000002408	Aff3	60	85.135	Nannospalax_galili
ENSGAGG00000003871	-	76	51.661	ENSOANG00000004624	-	84	51.292	Ornithorhynchus_anatinus
ENSGAGG00000003871	-	76	69.675	ENSOARG00000013344	-	84	69.675	Ovis_aries
ENSGAGG00000003871	-	76	40.803	ENSPTIG00000018890	AFF2	67	40.468	Panthera_tigris_altaica
ENSGAGG00000003871	-	76	60.870	ENSPEMG00000014802	Aff3	71	82.432	Peromyscus_maniculatus_bairdii
ENSGAGG00000003871	-	76	41.333	ENSRBIG00000040484	-	82	39.667	Rhinopithecus_bieti
ENSGAGG00000003871	-	76	41.333	ENSRROG00000032529	-	72	39.667	Rhinopithecus_roxellana
ENSGAGG00000003871	-	92	36.390	ENSSBOG00000021562	AFF4	76	39.298	Saimiri_boliviensis_boliviensis
ENSGAGG00000003871	-	75	37.627	ENSSHAG00000009556	AFF2	83	37.671	Sarcophilus_harrisii
ENSGAGG00000003871	-	75	73.214	ENSSHAG00000014244	-	94	73.214	Sarcophilus_harrisii
ENSGAGG00000003871	-	73	37.681	ENSSFOG00015000839	-	67	36.594	Scleropages_formosus
ENSGAGG00000003871	-	75	38.225	ENSSDUG00000013932	-	67	37.884	Seriola_dumerili
ENSGAGG00000003871	-	74	36.644	ENSSLDG00000022289	-	66	36.644	Seriola_lalandi_dorsalis
ENSGAGG00000003871	-	76	66.052	ENSTGUG00000010070	-	74	66.052	Taeniopygia_guttata
ENSGAGG00000003871	-	76	67.606	ENSUMAG00000007800	-	79	67.944	Ursus_maritimus