EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000003977 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 3195 bases
Position: chrPPEB01003750.1:135913-139107
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000004843	Ribosomal_S28e	PF01200.18	1.7e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000005665	-	502	-	ENSGAGP00000004843	66 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000003977's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000003977's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000003977	-	61	90.000	ENSGAGG00000016191	-	60	90.000
ENSGAGG00000003977	-	80	86.792	ENSGAGG00000004683	-	54	86.792

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000003977	-	80	90.566	ENSG00000233927	RPS28	77	90.566	Homo_sapiens
ENSGAGG00000003977	-	80	84.906	ENSAPOG00000015173	rps28	77	84.906	Acanthochromis_polyacanthus
ENSGAGG00000003977	-	80	90.566	ENSAMEG00000004917	RPS28	77	90.566	Ailuropoda_melanoleuca
ENSGAGG00000003977	-	80	84.906	ENSACIG00000020589	rps28	77	84.906	Amphilophus_citrinellus
ENSGAGG00000003977	-	80	84.906	ENSAOCG00000019080	rps28	77	84.906	Amphiprion_ocellaris
ENSGAGG00000003977	-	80	84.906	ENSAPEG00000015829	rps28	77	84.906	Amphiprion_percula
ENSGAGG00000003977	-	80	84.906	ENSATEG00000018266	rps28	77	84.906	Anabas_testudineus
ENSGAGG00000003977	-	80	69.811	ENSANAG00000034851	-	74	69.811	Aotus_nancymaae
ENSGAGG00000003977	-	80	88.679	ENSANAG00000019522	-	77	88.679	Aotus_nancymaae
ENSGAGG00000003977	-	80	88.679	ENSANAG00000003228	-	77	88.679	Aotus_nancymaae
ENSGAGG00000003977	-	80	90.566	ENSANAG00000036427	-	77	90.566	Aotus_nancymaae
ENSGAGG00000003977	-	80	84.906	ENSACLG00000008061	rps28	77	84.906	Astatotilapia_calliptera
ENSGAGG00000003977	-	80	84.906	ENSAMXG00000042497	rps28	77	84.906	Astyanax_mexicanus
ENSGAGG00000003977	-	80	90.566	ENSBTAG00000002468	RPS28	77	90.566	Bos_taurus
ENSGAGG00000003977	-	70	72.340	WBGene00004497	rps-28	72	72.340	Caenorhabditis_elegans
ENSGAGG00000003977	-	80	88.679	ENSCJAG00000022371	-	52	88.679	Callithrix_jacchus
ENSGAGG00000003977	-	80	90.566	ENSCJAG00000010726	RPS28	77	90.566	Callithrix_jacchus
ENSGAGG00000003977	-	80	90.566	ENSCHIG00000017787	RPS28	77	90.566	Capra_hircus
ENSGAGG00000003977	-	80	75.472	ENSCHIG00000007447	-	77	75.472	Capra_hircus
ENSGAGG00000003977	-	80	77.358	ENSCHIG00000009632	-	85	77.358	Capra_hircus
ENSGAGG00000003977	-	80	90.566	ENSTSYG00000031396	-	77	90.566	Carlito_syrichta
ENSGAGG00000003977	-	80	68.519	ENSTSYG00000027428	-	75	68.519	Carlito_syrichta
ENSGAGG00000003977	-	80	90.566	ENSCPOG00000022876	RPS28	77	90.566	Cavia_porcellus
ENSGAGG00000003977	-	86	75.439	ENSCCAG00000029502	-	89	75.439	Cebus_capucinus
ENSGAGG00000003977	-	68	91.111	ENSCCAG00000016358	-	73	91.111	Cebus_capucinus
ENSGAGG00000003977	-	80	90.566	ENSCCAG00000030298	-	77	90.566	Cebus_capucinus
ENSGAGG00000003977	-	80	90.566	ENSCATG00000014458	RPS28	77	90.566	Cercocebus_atys
ENSGAGG00000003977	-	80	90.566	ENSCLAG00000002218	RPS28	77	90.566	Chinchilla_lanigera
ENSGAGG00000003977	-	80	78.182	ENSCLAG00000017469	-	79	78.182	Chinchilla_lanigera
ENSGAGG00000003977	-	80	90.566	ENSCSAG00000000174	-	78	90.566	Chlorocebus_sabaeus
ENSGAGG00000003977	-	80	90.566	ENSCPBG00000017064	RPS28	77	90.566	Chrysemys_picta_bellii
ENSGAGG00000003977	-	67	79.545	ENSCING00000013272	-	65	79.545	Ciona_intestinalis
ENSGAGG00000003977	-	80	90.566	ENSCANG00000020391	RPS28	77	90.566	Colobus_angolensis_palliatus
ENSGAGG00000003977	-	80	71.698	ENSCGRG00001004003	-	77	71.698	Cricetulus_griseus_chok1gshd
ENSGAGG00000003977	-	80	90.566	ENSCGRG00001022084	Rps28	77	90.566	Cricetulus_griseus_chok1gshd
ENSGAGG00000003977	-	80	67.857	ENSCGRG00000010737	-	76	67.857	Cricetulus_griseus_crigri
ENSGAGG00000003977	-	80	90.566	ENSCGRG00000004955	Rps28	77	90.566	Cricetulus_griseus_crigri
ENSGAGG00000003977	-	80	84.906	ENSCSEG00000011735	rps28	77	84.906	Cynoglossus_semilaevis
ENSGAGG00000003977	-	80	84.906	ENSCVAG00000012656	rps28	77	84.906	Cyprinodon_variegatus
ENSGAGG00000003977	-	80	84.906	ENSDARG00000035860	rps28	77	84.906	Danio_rerio
ENSGAGG00000003977	-	70	76.087	ENSDNOG00000044899	-	67	76.087	Dasypus_novemcinctus
ENSGAGG00000003977	-	80	73.585	ENSDNOG00000036089	-	77	73.585	Dasypus_novemcinctus
ENSGAGG00000003977	-	80	75.472	ENSDNOG00000041203	-	82	75.472	Dasypus_novemcinctus
ENSGAGG00000003977	-	80	75.472	ENSDNOG00000043010	-	77	75.472	Dasypus_novemcinctus
ENSGAGG00000003977	-	80	79.245	ENSDNOG00000043999	-	77	79.245	Dasypus_novemcinctus
ENSGAGG00000003977	-	80	90.566	ENSDNOG00000038487	-	77	90.566	Dasypus_novemcinctus
ENSGAGG00000003977	-	80	90.566	ENSDORG00000027636	Rps28	77	90.566	Dipodomys_ordii
ENSGAGG00000003977	-	67	72.727	FBgn0039739	RpS28a	69	72.727	Drosophila_melanogaster
ENSGAGG00000003977	-	71	68.085	FBgn0030136	RpS28b	72	68.085	Drosophila_melanogaster
ENSGAGG00000003977	-	65	79.070	ENSEBUG00000006971	rps28	62	79.070	Eptatretus_burgeri
ENSGAGG00000003977	-	80	90.566	ENSEASG00005003719	RPS28	77	90.566	Equus_asinus_asinus
ENSGAGG00000003977	-	80	90.566	ENSECAG00000017256	RPS28	77	90.566	Equus_caballus
ENSGAGG00000003977	-	77	70.588	ENSEEUG00000006685	-	74	70.588	Erinaceus_europaeus
ENSGAGG00000003977	-	80	84.906	ENSELUG00000020168	RS28	77	84.906	Esox_lucius
ENSGAGG00000003977	-	80	90.566	ENSFCAG00000024931	-	77	90.566	Felis_catus
ENSGAGG00000003977	-	80	71.698	ENSFCAG00000040752	-	77	71.698	Felis_catus
ENSGAGG00000003977	-	80	90.566	ENSFDAG00000009062	RPS28	77	90.566	Fukomys_damarensis
ENSGAGG00000003977	-	80	84.906	ENSFHEG00000005855	rps28	77	84.906	Fundulus_heteroclitus
ENSGAGG00000003977	-	80	84.906	ENSGMOG00000010283	rps28	77	84.906	Gadus_morhua
ENSGAGG00000003977	-	80	90.566	ENSGALG00000049538	RPS28	77	90.566	Gallus_gallus
ENSGAGG00000003977	-	80	81.132	ENSGAFG00000012933	rps28	76	81.132	Gambusia_affinis
ENSGAGG00000003977	-	80	84.906	ENSGACG00000015568	rps28	77	84.906	Gasterosteus_aculeatus
ENSGAGG00000003977	-	80	90.566	ENSGGOG00000024725	RPS28	77	90.566	Gorilla_gorilla
ENSGAGG00000003977	-	80	84.906	ENSHBUG00000011321	rps28	77	84.906	Haplochromis_burtoni
ENSGAGG00000003977	-	80	90.566	ENSHGLG00000015344	RPS28	77	90.566	Heterocephalus_glaber_female
ENSGAGG00000003977	-	80	77.358	ENSHGLG00100020381	-	77	77.358	Heterocephalus_glaber_male
ENSGAGG00000003977	-	80	77.358	ENSHGLG00100019526	-	77	77.358	Heterocephalus_glaber_male
ENSGAGG00000003977	-	80	90.566	ENSHGLG00100003314	RPS28	77	90.566	Heterocephalus_glaber_male
ENSGAGG00000003977	-	80	81.132	ENSHCOG00000005849	rps28	77	81.132	Hippocampus_comes
ENSGAGG00000003977	-	80	90.566	ENSSTOG00000022842	RPS28	77	90.566	Ictidomys_tridecemlineatus
ENSGAGG00000003977	-	80	67.925	ENSJJAG00000020121	-	79	67.925	Jaculus_jaculus
ENSGAGG00000003977	-	80	90.566	ENSJJAG00000017384	-	77	90.566	Jaculus_jaculus
ENSGAGG00000003977	-	80	83.019	ENSJJAG00000010478	-	56	83.019	Jaculus_jaculus
ENSGAGG00000003977	-	76	78.000	ENSJJAG00000012669	-	75	78.000	Jaculus_jaculus
ENSGAGG00000003977	-	80	67.925	ENSJJAG00000021064	-	76	67.925	Jaculus_jaculus
ENSGAGG00000003977	-	80	77.358	ENSJJAG00000009096	-	77	77.358	Jaculus_jaculus
ENSGAGG00000003977	-	80	84.906	ENSKMAG00000015763	rps28	77	84.906	Kryptolebias_marmoratus
ENSGAGG00000003977	-	80	58.491	ENSLBEG00000013549	rps28	70	58.491	Labrus_bergylta
ENSGAGG00000003977	-	80	84.906	ENSLOCG00000002654	rps28	65	84.906	Lepisosteus_oculatus
ENSGAGG00000003977	-	80	90.566	ENSLAFG00000029923	RPS28	77	90.566	Loxodonta_africana
ENSGAGG00000003977	-	80	88.679	ENSMFAG00000029879	-	77	88.679	Macaca_fascicularis
ENSGAGG00000003977	-	80	90.566	ENSMFAG00000042430	-	77	90.566	Macaca_fascicularis
ENSGAGG00000003977	-	77	92.157	ENSMFAG00000024228	-	74	92.157	Macaca_fascicularis
ENSGAGG00000003977	-	80	90.566	ENSMMUG00000028895	RPS28	77	90.566	Macaca_mulatta
ENSGAGG00000003977	-	80	86.792	ENSMMUG00000030827	-	77	86.792	Macaca_mulatta
ENSGAGG00000003977	-	80	88.679	ENSMMUG00000030258	-	77	88.679	Macaca_mulatta
ENSGAGG00000003977	-	80	75.472	ENSMNEG00000034123	-	74	75.472	Macaca_nemestrina
ENSGAGG00000003977	-	80	90.566	ENSMNEG00000036447	RPS28	77	90.566	Macaca_nemestrina
ENSGAGG00000003977	-	80	90.566	ENSMLEG00000036014	RPS28	77	90.566	Mandrillus_leucophaeus
ENSGAGG00000003977	-	80	86.792	ENSMAMG00000005811	rps28	77	86.792	Mastacembelus_armatus
ENSGAGG00000003977	-	80	84.906	ENSMZEG00005003997	rps28	77	84.906	Maylandia_zebra
ENSGAGG00000003977	-	80	90.566	ENSMAUG00000014417	Rps28	77	90.566	Mesocricetus_auratus
ENSGAGG00000003977	-	80	90.566	ENSMICG00000026849	RPS28	77	90.566	Microcebus_murinus
ENSGAGG00000003977	-	80	90.566	ENSMOCG00000008235	-	77	90.566	Microtus_ochrogaster
ENSGAGG00000003977	-	80	88.679	ENSMOCG00000001023	-	77	88.679	Microtus_ochrogaster
ENSGAGG00000003977	-	80	88.679	ENSMOCG00000002602	-	69	88.679	Microtus_ochrogaster
ENSGAGG00000003977	-	80	88.679	ENSMOCG00000006129	-	77	88.679	Microtus_ochrogaster
ENSGAGG00000003977	-	80	90.566	ENSMOCG00000018789	-	77	90.566	Microtus_ochrogaster
ENSGAGG00000003977	-	80	90.566	ENSMOCG00000010653	-	77	90.566	Microtus_ochrogaster
ENSGAGG00000003977	-	80	90.566	ENSMOCG00000010096	-	77	90.566	Microtus_ochrogaster
ENSGAGG00000003977	-	80	90.566	ENSMOCG00000007820	-	77	90.566	Microtus_ochrogaster
ENSGAGG00000003977	-	64	83.333	ENSMOCG00000007029	-	69	83.333	Microtus_ochrogaster
ENSGAGG00000003977	-	80	54.717	ENSMMOG00000006246	rps28	70	54.717	Mola_mola
ENSGAGG00000003977	-	80	77.358	ENSMODG00000025356	-	78	77.358	Monodelphis_domestica
ENSGAGG00000003977	-	80	88.679	ENSMODG00000003890	RPS28	77	88.679	Monodelphis_domestica
ENSGAGG00000003977	-	80	86.792	ENSMALG00000000781	rps28	77	86.792	Monopterus_albus
ENSGAGG00000003977	-	80	90.566	MGP_CAROLIEiJ_G0021418	-	77	90.566	Mus_caroli
ENSGAGG00000003977	-	80	90.566	ENSMUSG00000067288	Rps28	77	90.566	Mus_musculus
ENSGAGG00000003977	-	80	90.566	MGP_PahariEiJ_G0020423	Rps28	77	90.566	Mus_pahari
ENSGAGG00000003977	-	80	90.566	MGP_SPRETEiJ_G0022330	-	77	90.566	Mus_spretus
ENSGAGG00000003977	-	80	88.679	MGP_SPRETEiJ_G0027470	-	77	88.679	Mus_spretus
ENSGAGG00000003977	-	80	90.566	ENSMLUG00000023621	RPS28	77	90.566	Myotis_lucifugus
ENSGAGG00000003977	-	80	90.566	ENSNGAG00000010951	-	77	90.566	Nannospalax_galili
ENSGAGG00000003977	-	80	90.566	ENSNGAG00000000148	-	77	90.566	Nannospalax_galili
ENSGAGG00000003977	-	80	83.019	ENSNGAG00000011527	-	77	83.019	Nannospalax_galili
ENSGAGG00000003977	-	80	81.132	ENSNGAG00000015826	-	72	81.132	Nannospalax_galili
ENSGAGG00000003977	-	80	84.906	ENSNBRG00000001485	rps28	77	84.906	Neolamprologus_brichardi
ENSGAGG00000003977	-	79	88.462	ENSNLEG00000029240	-	76	88.462	Nomascus_leucogenys
ENSGAGG00000003977	-	80	90.566	ENSNLEG00000034904	-	77	90.566	Nomascus_leucogenys
ENSGAGG00000003977	-	61	90.000	ENSNLEG00000036113	-	71	90.000	Nomascus_leucogenys
ENSGAGG00000003977	-	80	90.566	ENSODEG00000012169	-	77	90.566	Octodon_degus
ENSGAGG00000003977	-	80	79.245	ENSODEG00000019037	-	77	79.245	Octodon_degus
ENSGAGG00000003977	-	80	90.566	ENSOCUG00000021484	RPS28	77	90.566	Oryctolagus_cuniculus
ENSGAGG00000003977	-	80	84.906	ENSORLG00000029846	rps28	77	84.906	Oryzias_latipes
ENSGAGG00000003977	-	80	84.906	ENSORLG00020022113	rps28	77	84.906	Oryzias_latipes_hni
ENSGAGG00000003977	-	80	84.906	ENSORLG00015005719	rps28	77	84.906	Oryzias_latipes_hsok
ENSGAGG00000003977	-	80	84.906	ENSOMEG00000017093	rps28	77	84.906	Oryzias_melastigma
ENSGAGG00000003977	-	80	71.698	ENSOGAG00000002534	-	79	71.698	Otolemur_garnettii
ENSGAGG00000003977	-	80	83.019	ENSOGAG00000024475	-	77	83.019	Otolemur_garnettii
ENSGAGG00000003977	-	80	77.358	ENSOARG00000004121	-	77	77.358	Ovis_aries
ENSGAGG00000003977	-	80	90.566	ENSOARG00000003689	-	77	90.566	Ovis_aries
ENSGAGG00000003977	-	80	71.698	ENSOARG00000013830	-	77	71.698	Ovis_aries
ENSGAGG00000003977	-	80	90.566	ENSPPAG00000028825	RPS28	77	90.566	Pan_paniscus
ENSGAGG00000003977	-	80	71.698	ENSPPRG00000016498	-	77	71.698	Panthera_pardus
ENSGAGG00000003977	-	80	90.566	ENSPPRG00000011146	RPS28	77	90.566	Panthera_pardus
ENSGAGG00000003977	-	70	71.739	ENSPTIG00000005894	-	69	71.739	Panthera_tigris_altaica
ENSGAGG00000003977	-	80	90.566	ENSPTRG00000040141	RPS28	77	90.566	Pan_troglodytes
ENSGAGG00000003977	-	80	88.679	ENSPANG00000014319	RPS28	77	88.679	Papio_anubis
ENSGAGG00000003977	-	80	58.491	ENSPKIG00000008060	rps28	70	58.491	Paramormyrops_kingsleyae
ENSGAGG00000003977	-	80	56.604	ENSPMGG00000017476	rps28	70	56.604	Periophthalmus_magnuspinnatus
ENSGAGG00000003977	-	80	79.310	ENSPEMG00000012673	-	62	79.310	Peromyscus_maniculatus_bairdii
ENSGAGG00000003977	-	80	90.566	ENSPEMG00000015848	Rps28	77	90.566	Peromyscus_maniculatus_bairdii
ENSGAGG00000003977	-	80	62.264	ENSPCIG00000026023	-	75	62.264	Phascolarctos_cinereus
ENSGAGG00000003977	-	80	83.019	ENSPCIG00000004578	-	68	83.019	Phascolarctos_cinereus
ENSGAGG00000003977	-	80	88.679	ENSPCIG00000020515	RPS28	77	88.679	Phascolarctos_cinereus
ENSGAGG00000003977	-	80	58.491	ENSPMEG00000002024	rps28	54	58.491	Poecilia_mexicana
ENSGAGG00000003977	-	80	58.491	ENSPREG00000008776	rps28	70	58.491	Poecilia_reticulata
ENSGAGG00000003977	-	80	77.358	ENSPPYG00000017517	-	77	77.358	Pongo_abelii
ENSGAGG00000003977	-	80	90.566	ENSPPYG00000002308	-	77	90.566	Pongo_abelii
ENSGAGG00000003977	-	80	90.566	ENSPCOG00000018363	RPS28	77	90.566	Propithecus_coquereli
ENSGAGG00000003977	-	80	84.906	ENSPNYG00000003176	rps28	77	84.906	Pundamilia_nyererei
ENSGAGG00000003977	-	80	84.906	ENSPNAG00000023640	rps28	77	84.906	Pygocentrus_nattereri
ENSGAGG00000003977	-	85	82.143	ENSRNOG00000046342	LOC100359503	77	82.143	Rattus_norvegicus
ENSGAGG00000003977	-	76	88.000	ENSRNOG00000030242	AABR07024115.1	72	88.000	Rattus_norvegicus
ENSGAGG00000003977	-	80	90.566	ENSRNOG00000042886	Rps28	77	90.566	Rattus_norvegicus
ENSGAGG00000003977	-	80	90.566	ENSRBIG00000042335	RPS28	77	90.566	Rhinopithecus_bieti
ENSGAGG00000003977	-	80	90.566	ENSRROG00000009415	RPS28	77	90.566	Rhinopithecus_roxellana
ENSGAGG00000003977	-	77	64.706	YLR264W	RPS28B	73	64.706	Saccharomyces_cerevisiae
ENSGAGG00000003977	-	80	62.264	YOR167C	RPS28A	76	62.264	Saccharomyces_cerevisiae
ENSGAGG00000003977	-	80	90.566	ENSSBOG00000012561	-	77	90.566	Saimiri_boliviensis_boliviensis
ENSGAGG00000003977	-	80	86.792	ENSSBOG00000008426	-	77	86.792	Saimiri_boliviensis_boliviensis
ENSGAGG00000003977	-	80	58.491	ENSSFOG00015020198	rps28	70	58.491	Scleropages_formosus
ENSGAGG00000003977	-	80	84.906	ENSSMAG00000005687	rps28	77	84.906	Scophthalmus_maximus
ENSGAGG00000003977	-	80	58.491	ENSSDUG00000012719	rps28	70	58.491	Seriola_dumerili
ENSGAGG00000003977	-	80	84.906	ENSSLDG00000021334	rps28	77	84.906	Seriola_lalandi_dorsalis
ENSGAGG00000003977	-	80	79.245	ENSSARG00000006449	-	77	79.245	Sorex_araneus
ENSGAGG00000003977	-	80	90.566	ENSSPUG00000002186	RPS28	77	90.566	Sphenodon_punctatus
ENSGAGG00000003977	-	80	84.906	ENSSPAG00000000028	rps28	77	84.906	Stegastes_partitus
ENSGAGG00000003977	-	80	90.566	ENSSSCG00000013597	RPS28	77	90.566	Sus_scrofa
ENSGAGG00000003977	-	80	71.698	ENSSSCG00000037340	-	71	71.698	Sus_scrofa
ENSGAGG00000003977	-	52	85.294	ENSTGUG00000000095	RPS28	62	85.294	Taeniopygia_guttata
ENSGAGG00000003977	-	80	58.491	ENSTRUG00000009208	rps28	70	58.491	Takifugu_rubripes
ENSGAGG00000003977	-	80	84.906	ENSTNIG00000011061	rps28	77	84.906	Tetraodon_nigroviridis
ENSGAGG00000003977	-	55	75.000	ENSTBEG00000015227	-	67	75.000	Tupaia_belangeri
ENSGAGG00000003977	-	80	90.566	ENSUAMG00000022329	-	51	90.566	Ursus_americanus
ENSGAGG00000003977	-	80	90.566	ENSUMAG00000014631	RPS28	77	90.566	Ursus_maritimus
ENSGAGG00000003977	-	80	88.679	ENSUMAG00000000588	-	77	88.679	Ursus_maritimus
ENSGAGG00000003977	-	80	90.566	ENSVVUG00000025217	RPS28	77	90.566	Vulpes_vulpes
ENSGAGG00000003977	-	80	83.019	ENSXETG00000021905	rps28p9	77	83.019	Xenopus_tropicalis
ENSGAGG00000003977	-	80	58.491	ENSXCOG00000007160	rps28	70	58.491	Xiphophorus_couchianus
ENSGAGG00000003977	-	80	58.491	ENSXMAG00000013950	rps28	70	58.491	Xiphophorus_maculatus