EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000004106 (Gene tree)
Gene ID: -
Gene Symbol: LSM14B
Alias: C20orf40|FAM61B|FLJ25473|FT005|LSM13|RAP55B|bA11M20.3
Full Name: LSM family member 14B
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 6361 bases
Position: chrPPEB01005670.1:115059-121419
Accession: 15887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000005027	FDF	PF09532.10	4.1e-24	1	1
ENSGAGP00000005031	FDF	PF09532.10	4.8e-10	1	1
ENSGAGP00000005030	FDF	PF09532.10	2.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000005870	LSM14B-202	750	-	ENSGAGP00000005030	249 (aa)	-	-
ENSGAGT00000005871	LSM14B-203	594	-	ENSGAGP00000005031	197 (aa)	-	-
ENSGAGT00000005867	LSM14B-201	782	-	ENSGAGP00000005027	258 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000004106's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000004106's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000004106	LSM14B	94	80.816	ENSG00000149657	LSM14B	75	78.191	Homo_sapiens
ENSGAGG00000004106	LSM14B	78	44.907	ENSAPOG00000001780	lsm14b	54	45.701	Acanthochromis_polyacanthus
ENSGAGG00000004106	LSM14B	78	38.312	ENSAPOG00000010003	-	80	35.294	Acanthochromis_polyacanthus
ENSGAGG00000004106	LSM14B	99	77.992	ENSAMEG00000013430	LSM14B	61	77.992	Ailuropoda_melanoleuca
ENSGAGG00000004106	LSM14B	76	41.584	ENSACIG00000012266	lsm14b	52	42.308	Amphilophus_citrinellus
ENSGAGG00000004106	LSM14B	71	37.356	ENSACIG00000003147	LSM14B	74	38.095	Amphilophus_citrinellus
ENSGAGG00000004106	LSM14B	78	44.907	ENSAOCG00000012380	lsm14b	54	46.606	Amphiprion_ocellaris
ENSGAGG00000004106	LSM14B	93	41.339	ENSAOCG00000006667	LSM14B	56	41.441	Amphiprion_ocellaris
ENSGAGG00000004106	LSM14B	80	34.914	ENSAPEG00000023633	lsm14b	54	40.541	Amphiprion_percula
ENSGAGG00000004106	LSM14B	62	53.750	ENSATEG00000015895	LSM14B	72	40.254	Anabas_testudineus
ENSGAGG00000004106	LSM14B	79	44.019	ENSATEG00000016603	lsm14b	53	45.972	Anabas_testudineus
ENSGAGG00000004106	LSM14B	97	89.641	ENSAPLG00000013203	LSM14B	64	89.641	Anas_platyrhynchos
ENSGAGG00000004106	LSM14B	94	81.707	ENSACAG00000016195	LSM14B	64	81.707	Anolis_carolinensis
ENSGAGG00000004106	LSM14B	94	81.224	ENSANAG00000037915	LSM14B	63	81.224	Aotus_nancymaae
ENSGAGG00000004106	LSM14B	80	40.000	ENSACLG00000019663	lsm14b	59	41.102	Astatotilapia_calliptera
ENSGAGG00000004106	LSM14B	63	48.148	ENSACLG00000011955	-	76	39.655	Astatotilapia_calliptera
ENSGAGG00000004106	LSM14B	63	50.617	ENSACLG00000019624	-	77	41.379	Astatotilapia_calliptera
ENSGAGG00000004106	LSM14B	76	54.245	ENSAMXG00000002865	lsm14b	55	54.839	Astyanax_mexicanus
ENSGAGG00000004106	LSM14B	99	76.834	ENSBTAG00000021558	LSM14B	61	76.834	Bos_taurus
ENSGAGG00000004106	LSM14B	94	81.224	ENSCJAG00000014434	LSM14B	63	81.224	Callithrix_jacchus
ENSGAGG00000004106	LSM14B	99	77.992	ENSCAFG00000012518	LSM14B	73	71.127	Canis_familiaris
ENSGAGG00000004106	LSM14B	99	77.992	ENSCAFG00020022150	LSM14B	63	81.224	Canis_lupus_dingo
ENSGAGG00000004106	LSM14B	94	62.140	ENSCHIG00000022681	-	64	62.551	Capra_hircus
ENSGAGG00000004106	LSM14B	99	77.606	ENSCHIG00000010284	-	63	80.816	Capra_hircus
ENSGAGG00000004106	LSM14B	94	82.041	ENSTSYG00000031914	LSM14B	63	82.041	Carlito_syrichta
ENSGAGG00000004106	LSM14B	94	80.816	ENSCAPG00000013059	LSM14B	93	71.479	Cavia_aperea
ENSGAGG00000004106	LSM14B	94	81.224	ENSCPOG00000038080	LSM14B	93	71.479	Cavia_porcellus
ENSGAGG00000004106	LSM14B	94	72.245	ENSCCAG00000024900	-	79	72.245	Cebus_capucinus
ENSGAGG00000004106	LSM14B	94	80.816	ENSCCAG00000021267	LSM14B	63	80.816	Cebus_capucinus
ENSGAGG00000004106	LSM14B	94	80.408	ENSCATG00000036006	LSM14B	63	80.408	Cercocebus_atys
ENSGAGG00000004106	LSM14B	94	81.224	ENSCLAG00000003186	LSM14B	93	71.479	Chinchilla_lanigera
ENSGAGG00000004106	LSM14B	94	80.816	ENSCSAG00000015729	LSM14B	67	71.127	Chlorocebus_sabaeus
ENSGAGG00000004106	LSM14B	60	76.129	ENSCHOG00000006997	-	59	76.129	Choloepus_hoffmanni
ENSGAGG00000004106	LSM14B	97	96.386	ENSCPBG00000027065	LSM14B	59	96.386	Chrysemys_picta_bellii
ENSGAGG00000004106	LSM14B	94	80.408	ENSCANG00000036986	LSM14B	71	80.408	Colobus_angolensis_palliatus
ENSGAGG00000004106	LSM14B	94	81.633	ENSCGRG00001018399	Lsm14b	93	71.479	Cricetulus_griseus_chok1gshd
ENSGAGG00000004106	LSM14B	94	73.361	ENSCGRG00000002484	-	100	71.721	Cricetulus_griseus_crigri
ENSGAGG00000004106	LSM14B	91	81.092	ENSCGRG00000006111	-	93	70.758	Cricetulus_griseus_crigri
ENSGAGG00000004106	LSM14B	78	41.364	ENSCSEG00000004722	lsm14b	56	40.598	Cynoglossus_semilaevis
ENSGAGG00000004106	LSM14B	93	39.615	ENSCSEG00000020669	LSM14B	56	37.288	Cynoglossus_semilaevis
ENSGAGG00000004106	LSM14B	87	36.596	ENSCVAG00000012433	-	78	34.807	Cyprinodon_variegatus
ENSGAGG00000004106	LSM14B	90	42.324	ENSDARG00000025386	lsm14b	61	43.802	Danio_rerio
ENSGAGG00000004106	LSM14B	99	77.606	ENSDNOG00000025246	LSM14B	93	70.070	Dasypus_novemcinctus
ENSGAGG00000004106	LSM14B	94	80.816	ENSDORG00000016683	Lsm14b	93	70.070	Dipodomys_ordii
ENSGAGG00000004106	LSM14B	93	62.656	ENSETEG00000001869	-	63	60.996	Echinops_telfairi
ENSGAGG00000004106	LSM14B	72	73.797	ENSETEG00000011188	-	80	73.797	Echinops_telfairi
ENSGAGG00000004106	LSM14B	99	76.834	ENSEASG00005023218	LSM14B	93	70.423	Equus_asinus_asinus
ENSGAGG00000004106	LSM14B	99	77.606	ENSECAG00000010659	LSM14B	63	80.816	Equus_caballus
ENSGAGG00000004106	LSM14B	78	45.070	ENSELUG00000016299	LSM14B	63	47.200	Esox_lucius
ENSGAGG00000004106	LSM14B	90	47.737	ENSELUG00000005780	lsm14b	53	51.163	Esox_lucius
ENSGAGG00000004106	LSM14B	94	80.816	ENSFCAG00000003248	LSM14B	63	80.816	Felis_catus
ENSGAGG00000004106	LSM14B	97	86.508	ENSFALG00000010618	LSM14B	65	86.508	Ficedula_albicollis
ENSGAGG00000004106	LSM14B	94	80.408	ENSFDAG00000002214	LSM14B	93	70.877	Fukomys_damarensis
ENSGAGG00000004106	LSM14B	78	38.785	ENSFHEG00000006237	lsm14b	52	38.785	Fundulus_heteroclitus
ENSGAGG00000004106	LSM14B	97	83.529	ENSGALG00000005125	LSM14B	64	87.550	Gallus_gallus
ENSGAGG00000004106	LSM14B	86	39.462	ENSGAFG00000013723	LSM14B	74	39.645	Gambusia_affinis
ENSGAGG00000004106	LSM14B	86	42.060	ENSGACG00000009973	lsm14b	59	41.202	Gasterosteus_aculeatus
ENSGAGG00000004106	LSM14B	94	80.816	ENSGGOG00000005630	LSM14B	93	70.775	Gorilla_gorilla
ENSGAGG00000004106	LSM14B	94	79.098	ENSHGLG00000015055	LSM14B	93	70.423	Heterocephalus_glaber_female
ENSGAGG00000004106	LSM14B	94	79.098	ENSHGLG00100015273	LSM14B	94	70.423	Heterocephalus_glaber_male
ENSGAGG00000004106	LSM14B	89	41.803	ENSHCOG00000018747	LSM14B	56	41.850	Hippocampus_comes
ENSGAGG00000004106	LSM14B	80	41.063	ENSHCOG00000004867	lsm14b	76	42.169	Hippocampus_comes
ENSGAGG00000004106	LSM14B	77	55.610	ENSIPUG00000014946	lsm14b	52	55.455	Ictalurus_punctatus
ENSGAGG00000004106	LSM14B	94	80.816	ENSSTOG00000020482	LSM14B	93	70.423	Ictidomys_tridecemlineatus
ENSGAGG00000004106	LSM14B	94	80.816	ENSJJAG00000012728	Lsm14b	93	70.070	Jaculus_jaculus
ENSGAGG00000004106	LSM14B	77	44.762	ENSKMAG00000012834	-	88	45.455	Kryptolebias_marmoratus
ENSGAGG00000004106	LSM14B	77	40.187	ENSKMAG00000017524	lsm14b	55	39.130	Kryptolebias_marmoratus
ENSGAGG00000004106	LSM14B	91	33.962	ENSLBEG00000007951	LSM14B	86	32.778	Labrus_bergylta
ENSGAGG00000004106	LSM14B	94	68.980	ENSLACG00000003849	LSM14B	57	68.852	Latimeria_chalumnae
ENSGAGG00000004106	LSM14B	94	55.200	ENSLOCG00000003746	lsm14b	69	55.200	Lepisosteus_oculatus
ENSGAGG00000004106	LSM14B	94	82.449	ENSLAFG00000007492	LSM14B	70	82.449	Loxodonta_africana
ENSGAGG00000004106	LSM14B	94	81.224	ENSMFAG00000041479	LSM14B	63	81.224	Macaca_fascicularis
ENSGAGG00000004106	LSM14B	94	81.224	ENSMMUG00000014084	LSM14B	63	81.224	Macaca_mulatta
ENSGAGG00000004106	LSM14B	94	81.224	ENSMNEG00000045573	LSM14B	63	81.224	Macaca_nemestrina
ENSGAGG00000004106	LSM14B	94	80.408	ENSMLEG00000040895	LSM14B	71	80.408	Mandrillus_leucophaeus
ENSGAGG00000004106	LSM14B	77	44.286	ENSMAMG00000020539	lsm14b	53	45.116	Mastacembelus_armatus
ENSGAGG00000004106	LSM14B	86	44.783	ENSMAMG00000024124	LSM14B	53	43.602	Mastacembelus_armatus
ENSGAGG00000004106	LSM14B	79	41.071	ENSMZEG00005026001	LSM14B	62	39.506	Maylandia_zebra
ENSGAGG00000004106	LSM14B	57	48.980	ENSMZEG00005002688	-	50	35.099	Maylandia_zebra
ENSGAGG00000004106	LSM14B	80	39.631	ENSMZEG00005000987	lsm14b	55	42.727	Maylandia_zebra
ENSGAGG00000004106	LSM14B	94	81.781	ENSMGAG00000005300	LSM14B	70	84.211	Meleagris_gallopavo
ENSGAGG00000004106	LSM14B	94	82.041	ENSMAUG00000020700	Lsm14b	93	71.831	Mesocricetus_auratus
ENSGAGG00000004106	LSM14B	94	82.449	ENSMICG00000014675	LSM14B	63	82.449	Microcebus_murinus
ENSGAGG00000004106	LSM14B	82	69.014	ENSMOCG00000005119	-	87	61.728	Microtus_ochrogaster
ENSGAGG00000004106	LSM14B	94	80.000	ENSMOCG00000020600	Lsm14b	93	69.718	Microtus_ochrogaster
ENSGAGG00000004106	LSM14B	82	41.743	ENSMMOG00000017321	LSM14B	52	41.284	Mola_mola
ENSGAGG00000004106	LSM14B	77	38.288	ENSMMOG00000020042	lsm14b	56	40.789	Mola_mola
ENSGAGG00000004106	LSM14B	99	81.008	ENSMODG00000016690	LSM14B	93	73.852	Monodelphis_domestica
ENSGAGG00000004106	LSM14B	79	42.922	ENSMALG00000022251	LSM14B	58	41.702	Monopterus_albus
ENSGAGG00000004106	LSM14B	84	44.495	ENSMALG00000004783	lsm14b	56	39.316	Monopterus_albus
ENSGAGG00000004106	LSM14B	94	79.592	MGP_CAROLIEiJ_G0024770	Lsm14b	63	80.000	Mus_caroli
ENSGAGG00000004106	LSM14B	94	80.000	ENSMUSG00000039108	Lsm14b	93	71.127	Mus_musculus
ENSGAGG00000004106	LSM14B	94	79.592	MGP_PahariEiJ_G0026214	Lsm14b	63	79.592	Mus_pahari
ENSGAGG00000004106	LSM14B	94	80.000	MGP_SPRETEiJ_G0025693	Lsm14b	63	80.408	Mus_spretus
ENSGAGG00000004106	LSM14B	99	75.194	ENSMPUG00000007584	LSM14B	71	69.366	Mustela_putorius_furo
ENSGAGG00000004106	LSM14B	94	80.081	ENSMLUG00000000304	LSM14B	64	80.081	Myotis_lucifugus
ENSGAGG00000004106	LSM14B	89	80.603	ENSNGAG00000016550	Lsm14b	100	80.603	Nannospalax_galili
ENSGAGG00000004106	LSM14B	94	81.633	ENSNLEG00000015757	LSM14B	71	81.633	Nomascus_leucogenys
ENSGAGG00000004106	LSM14B	94	80.816	ENSODEG00000004099	LSM14B	93	70.775	Octodon_degus
ENSGAGG00000004106	LSM14B	80	39.631	ENSONIG00000020318	lsm14b	59	43.220	Oreochromis_niloticus
ENSGAGG00000004106	LSM14B	94	79.098	ENSOCUG00000006279	LSM14B	71	79.098	Oryctolagus_cuniculus
ENSGAGG00000004106	LSM14B	80	38.565	ENSORLG00000028353	LSM14B	53	36.744	Oryzias_latipes
ENSGAGG00000004106	LSM14B	78	38.605	ENSORLG00000013525	lsm14b	54	40.000	Oryzias_latipes
ENSGAGG00000004106	LSM14B	80	38.164	ENSORLG00020018191	-	63	37.186	Oryzias_latipes_hni
ENSGAGG00000004106	LSM14B	78	38.605	ENSORLG00020020553	lsm14b	54	40.000	Oryzias_latipes_hni
ENSGAGG00000004106	LSM14B	78	38.605	ENSORLG00015016862	lsm14b	54	40.000	Oryzias_latipes_hsok
ENSGAGG00000004106	LSM14B	80	38.565	ENSORLG00015013157	LSM14B	53	36.744	Oryzias_latipes_hsok
ENSGAGG00000004106	LSM14B	78	39.070	ENSOMEG00000023917	lsm14b	54	40.455	Oryzias_melastigma
ENSGAGG00000004106	LSM14B	77	36.464	ENSOMEG00000000171	-	73	34.591	Oryzias_melastigma
ENSGAGG00000004106	LSM14B	94	81.633	ENSOGAG00000003915	LSM14B	57	81.633	Otolemur_garnettii
ENSGAGG00000004106	LSM14B	99	77.220	ENSOARG00000014706	LSM14B	66	77.220	Ovis_aries
ENSGAGG00000004106	LSM14B	94	80.816	ENSPPAG00000035799	LSM14B	66	80.816	Pan_paniscus
ENSGAGG00000004106	LSM14B	94	80.816	ENSPPRG00000009197	LSM14B	63	80.816	Panthera_pardus
ENSGAGG00000004106	LSM14B	87	76.652	ENSPTIG00000021518	LSM14B	85	69.048	Panthera_tigris_altaica
ENSGAGG00000004106	LSM14B	94	80.816	ENSPTRG00000013696	LSM14B	63	80.816	Pan_troglodytes
ENSGAGG00000004106	LSM14B	94	80.816	ENSPANG00000011747	LSM14B	63	80.816	Papio_anubis
ENSGAGG00000004106	LSM14B	91	53.942	ENSPKIG00000003275	lsm14b	61	54.202	Paramormyrops_kingsleyae
ENSGAGG00000004106	LSM14B	97	91.566	ENSPSIG00000014762	LSM14B	82	91.566	Pelodiscus_sinensis
ENSGAGG00000004106	LSM14B	94	81.224	ENSPEMG00000017688	Lsm14b	93	70.775	Peromyscus_maniculatus_bairdii
ENSGAGG00000004106	LSM14B	94	84.016	ENSPCIG00000013405	LSM14B	63	84.016	Phascolarctos_cinereus
ENSGAGG00000004106	LSM14B	92	43.254	ENSPFOG00000005631	lsm14b	55	42.273	Poecilia_formosa
ENSGAGG00000004106	LSM14B	77	38.756	ENSPLAG00000005793	LSM14B	53	38.208	Poecilia_latipinna
ENSGAGG00000004106	LSM14B	91	43.033	ENSPLAG00000002449	lsm14b	53	41.509	Poecilia_latipinna
ENSGAGG00000004106	LSM14B	77	37.736	ENSPMEG00000022953	LSM14B	53	38.605	Poecilia_mexicana
ENSGAGG00000004106	LSM14B	91	42.623	ENSPMEG00000000745	lsm14b	53	41.509	Poecilia_mexicana
ENSGAGG00000004106	LSM14B	81	38.679	ENSPREG00000007828	LSM14B	70	37.736	Poecilia_reticulata
ENSGAGG00000004106	LSM14B	94	82.449	ENSPCOG00000013625	LSM14B	63	82.449	Propithecus_coquereli
ENSGAGG00000004106	LSM14B	59	85.065	ENSPVAG00000017918	LSM14B	50	85.161	Pteropus_vampyrus
ENSGAGG00000004106	LSM14B	80	53.023	ENSPNAG00000012777	lsm14b	56	53.636	Pygocentrus_nattereri
ENSGAGG00000004106	LSM14B	94	79.184	ENSRNOG00000054557	Lsm14b	67	69.718	Rattus_norvegicus
ENSGAGG00000004106	LSM14B	94	80.000	ENSRBIG00000033461	LSM14B	70	80.000	Rhinopithecus_bieti
ENSGAGG00000004106	LSM14B	94	80.408	ENSRROG00000042949	LSM14B	93	70.775	Rhinopithecus_roxellana
ENSGAGG00000004106	LSM14B	94	80.816	ENSSBOG00000032820	LSM14B	93	66.333	Saimiri_boliviensis_boliviensis
ENSGAGG00000004106	LSM14B	99	80.695	ENSSHAG00000015528	LSM14B	93	73.239	Sarcophilus_harrisii
ENSGAGG00000004106	LSM14B	77	52.632	ENSSFOG00015004627	lsm14b	54	53.271	Scleropages_formosus
ENSGAGG00000004106	LSM14B	78	43.578	ENSSMAG00000012725	lsm14b	55	42.982	Scophthalmus_maximus
ENSGAGG00000004106	LSM14B	95	44.487	ENSSMAG00000000135	LSM14B	61	42.739	Scophthalmus_maximus
ENSGAGG00000004106	LSM14B	79	44.037	ENSSDUG00000022770	LSM14B	55	44.186	Seriola_dumerili
ENSGAGG00000004106	LSM14B	78	44.749	ENSSDUG00000020977	lsm14b	55	41.964	Seriola_dumerili
ENSGAGG00000004106	LSM14B	86	40.506	ENSSLDG00000011354	-	79	42.672	Seriola_lalandi_dorsalis
ENSGAGG00000004106	LSM14B	79	77.033	ENSSARG00000007749	-	100	77.033	Sorex_araneus
ENSGAGG00000004106	LSM14B	94	85.714	ENSSPUG00000014360	LSM14B	58	85.714	Sphenodon_punctatus
ENSGAGG00000004106	LSM14B	80	41.981	ENSSPAG00000020915	lsm14b	52	42.791	Stegastes_partitus
ENSGAGG00000004106	LSM14B	91	37.553	ENSSPAG00000018854	-	77	33.668	Stegastes_partitus
ENSGAGG00000004106	LSM14B	94	79.098	ENSSSCG00000026052	LSM14B	93	69.718	Sus_scrofa
ENSGAGG00000004106	LSM14B	94	88.211	ENSTGUG00000007884	LSM14B	71	88.211	Taeniopygia_guttata
ENSGAGG00000004106	LSM14B	94	41.339	ENSTRUG00000011354	lsm14b	55	40.991	Takifugu_rubripes
ENSGAGG00000004106	LSM14B	83	41.518	ENSTRUG00000001529	LSM14B	55	41.176	Takifugu_rubripes
ENSGAGG00000004106	LSM14B	81	43.172	ENSTNIG00000002445	lsm14b	57	43.172	Tetraodon_nigroviridis
ENSGAGG00000004106	LSM14B	99	55.282	ENSTTRG00000011043	LSM14B	56	50.391	Tursiops_truncatus
ENSGAGG00000004106	LSM14B	99	77.992	ENSUAMG00000025298	LSM14B	64	81.224	Ursus_americanus
ENSGAGG00000004106	LSM14B	99	77.992	ENSUMAG00000000480	LSM14B	64	81.224	Ursus_maritimus
ENSGAGG00000004106	LSM14B	99	77.606	ENSVVUG00000015920	LSM14B	93	70.775	Vulpes_vulpes
ENSGAGG00000004106	LSM14B	74	67.010	ENSXETG00000001997	lsm14b	57	70.213	Xenopus_tropicalis
ENSGAGG00000004106	LSM14B	91	40.816	ENSXMAG00000010013	lsm14b	52	39.151	Xiphophorus_maculatus