EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000004149 (Gene tree)
Gene ID: -
Gene Symbol: ZIC3
Alias: HTX|HTX1|ZNF203
Full Name: Zic family member 3
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 6156 bases
Position: chrPPEB01001151.1:233275-239430
Accession: 12874
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000005109	zf-C2H2	PF00096.26	9.4e-21	1	3
ENSGAGP00000005109	zf-C2H2	PF00096.26	9.4e-21	2	3
ENSGAGP00000005109	zf-C2H2	PF00096.26	9.4e-21	3	3
ENSGAGP00000005109	zf-met	PF12874.7	4.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000005956	ZIC3-201	1401	-	ENSGAGP00000005109	466 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000004149's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000004149's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000004149	ZIC3	92	80.227	ENSG00000156925	ZIC3	94	80.227	Homo_sapiens
ENSGAGG00000004149	ZIC3	92	80.909	ENSANAG00000019614	ZIC3	94	80.909	Aotus_nancymaae
ENSGAGG00000004149	ZIC3	92	80.909	ENSCJAG00000013792	ZIC3	94	80.909	Callithrix_jacchus
ENSGAGG00000004149	ZIC3	92	81.321	ENSCAFG00000018979	ZIC3	94	81.321	Canis_familiaris
ENSGAGG00000004149	ZIC3	92	78.815	ENSTSYG00000003356	ZIC3	94	79.271	Carlito_syrichta
ENSGAGG00000004149	ZIC3	92	80.682	ENSCCAG00000025983	ZIC3	94	80.682	Cebus_capucinus
ENSGAGG00000004149	ZIC3	92	81.321	ENSCATG00000036569	ZIC3	96	84.783	Cercocebus_atys
ENSGAGG00000004149	ZIC3	92	81.093	ENSCLAG00000001934	ZIC3	94	81.093	Chinchilla_lanigera
ENSGAGG00000004149	ZIC3	84	90.819	ENSCPBG00000026115	ZIC3	95	90.819	Chrysemys_picta_bellii
ENSGAGG00000004149	ZIC3	92	81.321	ENSCANG00000017505	ZIC3	94	81.321	Colobus_angolensis_palliatus
ENSGAGG00000004149	ZIC3	92	80.089	ENSCGRG00001024527	Zic3	91	85.366	Cricetulus_griseus_chok1gshd
ENSGAGG00000004149	ZIC3	92	79.642	ENSDORG00000025481	Zic3	95	79.642	Dipodomys_ordii
ENSGAGG00000004149	ZIC3	92	81.549	ENSFCAG00000025684	ZIC3	94	81.549	Felis_catus
ENSGAGG00000004149	ZIC3	74	79.661	ENSFDAG00000014929	ZIC3	94	79.603	Fukomys_damarensis
ENSGAGG00000004149	ZIC3	92	80.638	ENSGGOG00000011914	ZIC3	94	80.638	Gorilla_gorilla
ENSGAGG00000004149	ZIC3	92	80.866	ENSHGLG00000006298	ZIC3	96	79.111	Heterocephalus_glaber_female
ENSGAGG00000004149	ZIC3	61	59.483	ENSHGLG00100002829	ZIC3	91	58.703	Heterocephalus_glaber_male
ENSGAGG00000004149	ZIC3	92	80.638	ENSJJAG00000022714	Zic3	95	79.642	Jaculus_jaculus
ENSGAGG00000004149	ZIC3	85	78.894	ENSLACG00000014597	ZIC3	92	75.116	Latimeria_chalumnae
ENSGAGG00000004149	ZIC3	82	77.608	ENSLAFG00000007048	ZIC3	95	77.608	Loxodonta_africana
ENSGAGG00000004149	ZIC3	92	81.321	ENSMFAG00000027018	ZIC3	94	81.321	Macaca_fascicularis
ENSGAGG00000004149	ZIC3	92	81.321	ENSMMUG00000002023	ZIC3	94	81.321	Macaca_mulatta
ENSGAGG00000004149	ZIC3	92	81.321	ENSMNEG00000040682	ZIC3	94	81.321	Macaca_nemestrina
ENSGAGG00000004149	ZIC3	92	81.321	ENSMLEG00000004378	ZIC3	94	81.321	Mandrillus_leucophaeus
ENSGAGG00000004149	ZIC3	92	80.089	ENSMAUG00000009402	Zic3	95	80.089	Mesocricetus_auratus
ENSGAGG00000004149	ZIC3	92	80.682	ENSMICG00000042529	ZIC3	94	80.682	Microcebus_murinus
ENSGAGG00000004149	ZIC3	92	80.269	ENSMOCG00000020544	Zic3	91	85.575	Microtus_ochrogaster
ENSGAGG00000004149	ZIC3	92	79.866	MGP_CAROLIEiJ_G0033101	Zic3	95	79.866	Mus_caroli
ENSGAGG00000004149	ZIC3	92	79.866	ENSMUSG00000067860	Zic3	95	79.866	Mus_musculus
ENSGAGG00000004149	ZIC3	92	79.866	MGP_PahariEiJ_G0031644	Zic3	95	79.866	Mus_pahari
ENSGAGG00000004149	ZIC3	92	79.866	MGP_SPRETEiJ_G0034256	Zic3	95	79.866	Mus_spretus
ENSGAGG00000004149	ZIC3	92	80.638	ENSNGAG00000023346	Zic3	95	79.642	Nannospalax_galili
ENSGAGG00000004149	ZIC3	71	84.190	ENSNLEG00000003005	-	92	84.190	Nomascus_leucogenys
ENSGAGG00000004149	ZIC3	92	81.093	ENSODEG00000005556	ZIC3	94	81.093	Octodon_degus
ENSGAGG00000004149	ZIC3	92	80.638	ENSPPAG00000030013	ZIC3	94	80.638	Pan_paniscus
ENSGAGG00000004149	ZIC3	92	81.136	ENSPPRG00000010839	ZIC3	94	81.136	Panthera_pardus
ENSGAGG00000004149	ZIC3	92	80.638	ENSPTRG00000043849	ZIC3	94	80.638	Pan_troglodytes
ENSGAGG00000004149	ZIC3	92	81.321	ENSPANG00000011357	ZIC3	94	81.321	Papio_anubis
ENSGAGG00000004149	ZIC3	93	74.023	ENSPKIG00000017705	zic3	89	76.382	Paramormyrops_kingsleyae
ENSGAGG00000004149	ZIC3	56	87.313	ENSPSIG00000011896	ZIC3	91	87.313	Pelodiscus_sinensis
ENSGAGG00000004149	ZIC3	92	80.089	ENSPEMG00000022168	Zic3	95	80.089	Peromyscus_maniculatus_bairdii
ENSGAGG00000004149	ZIC3	92	80.866	ENSPCOG00000021557	ZIC3	94	80.866	Propithecus_coquereli
ENSGAGG00000004149	ZIC3	92	79.418	ENSRNOG00000000861	Zic3	93	84.634	Rattus_norvegicus
ENSGAGG00000004149	ZIC3	92	81.321	ENSRBIG00000030660	ZIC3	94	81.321	Rhinopithecus_bieti
ENSGAGG00000004149	ZIC3	92	81.321	ENSRROG00000028410	ZIC3	94	81.321	Rhinopithecus_roxellana
ENSGAGG00000004149	ZIC3	92	80.682	ENSSBOG00000024684	ZIC3	94	80.682	Saimiri_boliviensis_boliviensis
ENSGAGG00000004149	ZIC3	92	75.174	ENSSFOG00015011731	zic3	92	73.427	Scleropages_formosus
ENSGAGG00000004149	ZIC3	92	69.070	ENSSFOG00015008079	zic3	92	68.837	Scleropages_formosus
ENSGAGG00000004149	ZIC3	77	83.696	ENSTGUG00000002155	ZIC3	95	83.696	Taeniopygia_guttata
ENSGAGG00000004149	ZIC3	92	80.313	ENSVVUG00000021378	ZIC3	98	84.652	Vulpes_vulpes
ENSGAGG00000004149	ZIC3	92	77.262	ENSXETG00000024458	zic3	92	77.030	Xenopus_tropicalis