EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000004181 (Gene tree)
Gene ID: -
Gene Symbol: RPUSD1
Alias: C16orf40|MGC19600|RLUCL
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 7810 bases
Position: chrPPEB01003768.1:2828-10637
Accession: 14173
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000005139	PseudoU_synth_2	PF00849.22	4.4e-25	1	1
ENSGAGP00000005140	PseudoU_synth_2	PF00849.22	4.4e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000005992	RPUSD1-201	1810	-	ENSGAGP00000005139	303 (aa)	-	-
ENSGAGT00000005993	RPUSD1-202	2142	-	ENSGAGP00000005140	303 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000004181's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000004181's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000004181	RPUSD1	99	65.372	ENSG00000007376	RPUSD1	92	85.393	Homo_sapiens
ENSGAGG00000004181	RPUSD1	99	61.513	ENSAPOG00000022221	rpusd1	98	61.184	Acanthochromis_polyacanthus
ENSGAGG00000004181	RPUSD1	99	66.447	ENSAMEG00000007461	RPUSD1	99	66.447	Ailuropoda_melanoleuca
ENSGAGG00000004181	RPUSD1	99	58.442	ENSACIG00000015863	rpusd1	98	60.784	Amphilophus_citrinellus
ENSGAGG00000004181	RPUSD1	99	60.855	ENSAOCG00000021975	rpusd1	95	60.855	Amphiprion_ocellaris
ENSGAGG00000004181	RPUSD1	99	61.184	ENSAPEG00000001316	rpusd1	95	61.184	Amphiprion_percula
ENSGAGG00000004181	RPUSD1	99	61.513	ENSATEG00000002984	rpusd1	98	61.842	Anabas_testudineus
ENSGAGG00000004181	RPUSD1	78	78.992	ENSAPLG00000012316	RPUSD1	98	78.992	Anas_platyrhynchos
ENSGAGG00000004181	RPUSD1	99	78.073	ENSACAG00000008953	RPUSD1	99	78.073	Anolis_carolinensis
ENSGAGG00000004181	RPUSD1	99	64.286	ENSANAG00000024709	RPUSD1	99	64.286	Aotus_nancymaae
ENSGAGG00000004181	RPUSD1	99	61.111	ENSACLG00000013692	rpusd1	98	61.111	Astatotilapia_calliptera
ENSGAGG00000004181	RPUSD1	99	60.596	ENSAMXG00000019802	rpusd1	99	60.596	Astyanax_mexicanus
ENSGAGG00000004181	RPUSD1	99	66.118	ENSBTAG00000000179	RPUSD1	99	66.343	Bos_taurus
ENSGAGG00000004181	RPUSD1	99	63.782	ENSCJAG00000012253	RPUSD1	99	63.636	Callithrix_jacchus
ENSGAGG00000004181	RPUSD1	99	65.132	ENSCAFG00000019614	RPUSD1	99	65.789	Canis_familiaris
ENSGAGG00000004181	RPUSD1	99	65.132	ENSCAFG00020008891	RPUSD1	99	65.789	Canis_lupus_dingo
ENSGAGG00000004181	RPUSD1	99	66.118	ENSCHIG00000012872	RPUSD1	99	66.343	Capra_hircus
ENSGAGG00000004181	RPUSD1	99	65.461	ENSTSYG00000036934	RPUSD1	92	75.000	Carlito_syrichta
ENSGAGG00000004181	RPUSD1	99	64.590	ENSCAPG00000014219	RPUSD1	99	64.590	Cavia_aperea
ENSGAGG00000004181	RPUSD1	99	64.590	ENSCPOG00000034604	RPUSD1	99	64.590	Cavia_porcellus
ENSGAGG00000004181	RPUSD1	99	64.610	ENSCCAG00000034385	RPUSD1	99	64.610	Cebus_capucinus
ENSGAGG00000004181	RPUSD1	99	65.372	ENSCATG00000042983	RPUSD1	79	85.437	Cercocebus_atys
ENSGAGG00000004181	RPUSD1	99	62.903	ENSCLAG00000013966	RPUSD1	99	63.844	Chinchilla_lanigera
ENSGAGG00000004181	RPUSD1	99	65.049	ENSCSAG00000012121	RPUSD1	99	65.049	Chlorocebus_sabaeus
ENSGAGG00000004181	RPUSD1	100	97.030	ENSCPBG00000021101	RPUSD1	100	97.030	Chrysemys_picta_bellii
ENSGAGG00000004181	RPUSD1	83	72.549	ENSCANG00000028576	RPUSD1	92	76.667	Colobus_angolensis_palliatus
ENSGAGG00000004181	RPUSD1	99	66.776	ENSCGRG00001014253	Rpusd1	99	66.776	Cricetulus_griseus_chok1gshd
ENSGAGG00000004181	RPUSD1	99	66.776	ENSCGRG00000017995	Rpusd1	99	66.776	Cricetulus_griseus_crigri
ENSGAGG00000004181	RPUSD1	99	61.258	ENSCSEG00000018512	rpusd1	99	61.258	Cynoglossus_semilaevis
ENSGAGG00000004181	RPUSD1	99	62.252	ENSCVAG00000022746	rpusd1	98	62.252	Cyprinodon_variegatus
ENSGAGG00000004181	RPUSD1	99	65.894	ENSDARG00000060192	rpusd1	99	65.894	Danio_rerio
ENSGAGG00000004181	RPUSD1	99	64.803	ENSDNOG00000003721	RPUSD1	99	64.803	Dasypus_novemcinctus
ENSGAGG00000004181	RPUSD1	99	64.803	ENSDORG00000026656	Rpusd1	99	65.461	Dipodomys_ordii
ENSGAGG00000004181	RPUSD1	99	46.708	ENSEBUG00000008767	rpusd1	93	46.708	Eptatretus_burgeri
ENSGAGG00000004181	RPUSD1	99	62.187	ENSEASG00005018421	RPUSD1	75	64.744	Equus_asinus_asinus
ENSGAGG00000004181	RPUSD1	99	59.539	ENSELUG00000014307	rpusd1	88	60.458	Esox_lucius
ENSGAGG00000004181	RPUSD1	99	65.461	ENSFCAG00000010359	RPUSD1	99	65.461	Felis_catus
ENSGAGG00000004181	RPUSD1	99	81.788	ENSFALG00000003211	RPUSD1	99	81.788	Ficedula_albicollis
ENSGAGG00000004181	RPUSD1	99	63.518	ENSFDAG00000013398	RPUSD1	99	63.518	Fukomys_damarensis
ENSGAGG00000004181	RPUSD1	99	60.927	ENSFHEG00000004736	rpusd1	98	61.639	Fundulus_heteroclitus
ENSGAGG00000004181	RPUSD1	99	59.736	ENSGMOG00000010756	rpusd1	98	60.396	Gadus_morhua
ENSGAGG00000004181	RPUSD1	99	82.450	ENSGALG00000005315	RPUSD1	99	82.450	Gallus_gallus
ENSGAGG00000004181	RPUSD1	99	61.589	ENSGAFG00000009886	rpusd1	98	61.589	Gambusia_affinis
ENSGAGG00000004181	RPUSD1	98	60.000	ENSGACG00000014276	rpusd1	98	60.855	Gasterosteus_aculeatus
ENSGAGG00000004181	RPUSD1	99	65.696	ENSGGOG00000013997	RPUSD1	99	65.696	Gorilla_gorilla
ENSGAGG00000004181	RPUSD1	99	61.438	ENSHBUG00000023728	rpusd1	98	61.438	Haplochromis_burtoni
ENSGAGG00000004181	RPUSD1	99	63.487	ENSHGLG00000002595	RPUSD1	99	63.844	Heterocephalus_glaber_female
ENSGAGG00000004181	RPUSD1	99	63.487	ENSHGLG00100014303	RPUSD1	99	63.844	Heterocephalus_glaber_male
ENSGAGG00000004181	RPUSD1	99	61.130	ENSHCOG00000002390	rpusd1	99	61.130	Hippocampus_comes
ENSGAGG00000004181	RPUSD1	100	64.356	ENSIPUG00000001570	rpusd1	99	64.356	Ictalurus_punctatus
ENSGAGG00000004181	RPUSD1	99	65.246	ENSSTOG00000004276	RPUSD1	99	65.246	Ictidomys_tridecemlineatus
ENSGAGG00000004181	RPUSD1	99	65.132	ENSJJAG00000015696	Rpusd1	99	65.902	Jaculus_jaculus
ENSGAGG00000004181	RPUSD1	99	61.333	ENSKMAG00000017287	rpusd1	98	61.333	Kryptolebias_marmoratus
ENSGAGG00000004181	RPUSD1	99	61.564	ENSLBEG00000013354	RPUSD1	98	62.623	Labrus_bergylta
ENSGAGG00000004181	RPUSD1	99	61.564	ENSLBEG00000022502	rpusd1	98	62.623	Labrus_bergylta
ENSGAGG00000004181	RPUSD1	99	76.159	ENSLACG00000008869	RPUSD1	99	76.159	Latimeria_chalumnae
ENSGAGG00000004181	RPUSD1	71	79.439	ENSLOCG00000005682	rpusd1	99	79.439	Lepisosteus_oculatus
ENSGAGG00000004181	RPUSD1	99	63.754	ENSLAFG00000002115	RPUSD1	99	63.754	Loxodonta_africana
ENSGAGG00000004181	RPUSD1	99	65.372	ENSMFAG00000003961	RPUSD1	79	85.437	Macaca_fascicularis
ENSGAGG00000004181	RPUSD1	99	65.372	ENSMMUG00000000842	RPUSD1	79	85.437	Macaca_mulatta
ENSGAGG00000004181	RPUSD1	99	65.372	ENSMNEG00000042712	RPUSD1	79	85.437	Macaca_nemestrina
ENSGAGG00000004181	RPUSD1	99	65.372	ENSMLEG00000030591	RPUSD1	79	85.437	Mandrillus_leucophaeus
ENSGAGG00000004181	RPUSD1	99	60.000	ENSMAMG00000004735	rpusd1	98	61.311	Mastacembelus_armatus
ENSGAGG00000004181	RPUSD1	99	61.111	ENSMZEG00005003214	rpusd1	98	61.111	Maylandia_zebra
ENSGAGG00000004181	RPUSD1	98	80.537	ENSMGAG00000005447	RPUSD1	99	80.537	Meleagris_gallopavo
ENSGAGG00000004181	RPUSD1	83	67.843	ENSMAUG00000019998	Rpusd1	97	67.843	Mesocricetus_auratus
ENSGAGG00000004181	RPUSD1	99	65.789	ENSMICG00000017561	RPUSD1	99	65.789	Microcebus_murinus
ENSGAGG00000004181	RPUSD1	99	66.118	ENSMOCG00000014082	Rpusd1	99	66.447	Microtus_ochrogaster
ENSGAGG00000004181	RPUSD1	99	58.361	ENSMMOG00000012569	rpusd1	99	59.672	Mola_mola
ENSGAGG00000004181	RPUSD1	99	73.841	ENSMODG00000016882	RPUSD1	98	73.841	Monodelphis_domestica
ENSGAGG00000004181	RPUSD1	99	61.639	ENSMALG00000017818	rpusd1	98	61.639	Monopterus_albus
ENSGAGG00000004181	RPUSD1	99	65.789	MGP_CAROLIEiJ_G0021244	Rpusd1	99	65.902	Mus_caroli
ENSGAGG00000004181	RPUSD1	99	66.118	ENSMUSG00000041199	Rpusd1	99	66.118	Mus_musculus
ENSGAGG00000004181	RPUSD1	99	65.461	MGP_PahariEiJ_G0023562	Rpusd1	99	65.902	Mus_pahari
ENSGAGG00000004181	RPUSD1	99	66.118	MGP_SPRETEiJ_G0022155	Rpusd1	99	66.118	Mus_spretus
ENSGAGG00000004181	RPUSD1	99	62.171	ENSMPUG00000015897	RPUSD1	99	62.829	Mustela_putorius_furo
ENSGAGG00000004181	RPUSD1	99	64.103	ENSMLUG00000001089	RPUSD1	99	64.630	Myotis_lucifugus
ENSGAGG00000004181	RPUSD1	99	64.803	ENSNGAG00000003595	Rpusd1	99	64.918	Nannospalax_galili
ENSGAGG00000004181	RPUSD1	99	62.000	ENSNBRG00000006457	rpusd1	98	62.252	Neolamprologus_brichardi
ENSGAGG00000004181	RPUSD1	54	52.632	ENSNLEG00000008424	-	98	52.632	Nomascus_leucogenys
ENSGAGG00000004181	RPUSD1	99	73.841	ENSMEUG00000016049	RPUSD1	99	73.841	Notamacropus_eugenii
ENSGAGG00000004181	RPUSD1	99	58.882	ENSOPRG00000008340	RPUSD1	99	58.882	Ochotona_princeps
ENSGAGG00000004181	RPUSD1	99	64.821	ENSODEG00000016945	RPUSD1	99	64.821	Octodon_degus
ENSGAGG00000004181	RPUSD1	99	60.984	ENSONIG00000015672	rpusd1	99	60.984	Oreochromis_niloticus
ENSGAGG00000004181	RPUSD1	99	60.465	ENSORLG00000013009	rpusd1	98	60.465	Oryzias_latipes
ENSGAGG00000004181	RPUSD1	99	60.596	ENSORLG00020010382	rpusd1	98	60.596	Oryzias_latipes_hni
ENSGAGG00000004181	RPUSD1	99	60.133	ENSORLG00015021354	rpusd1	98	60.133	Oryzias_latipes_hsok
ENSGAGG00000004181	RPUSD1	99	61.667	ENSOMEG00000021426	rpusd1	98	61.667	Oryzias_melastigma
ENSGAGG00000004181	RPUSD1	99	63.924	ENSOGAG00000003795	RPUSD1	99	66.019	Otolemur_garnettii
ENSGAGG00000004181	RPUSD1	99	66.447	ENSOARG00000014254	RPUSD1	99	66.667	Ovis_aries
ENSGAGG00000004181	RPUSD1	99	65.049	ENSPPAG00000034797	RPUSD1	79	85.437	Pan_paniscus
ENSGAGG00000004181	RPUSD1	99	65.574	ENSPPRG00000012389	RPUSD1	99	65.574	Panthera_pardus
ENSGAGG00000004181	RPUSD1	99	65.246	ENSPTIG00000008545	RPUSD1	78	81.553	Panthera_tigris_altaica
ENSGAGG00000004181	RPUSD1	99	65.049	ENSPTRG00000007565	RPUSD1	79	85.437	Pan_troglodytes
ENSGAGG00000004181	RPUSD1	99	65.049	ENSPANG00000024401	RPUSD1	79	85.437	Papio_anubis
ENSGAGG00000004181	RPUSD1	99	66.556	ENSPKIG00000018890	rpusd1	90	66.556	Paramormyrops_kingsleyae
ENSGAGG00000004181	RPUSD1	99	91.060	ENSPSIG00000013945	RPUSD1	99	91.060	Pelodiscus_sinensis
ENSGAGG00000004181	RPUSD1	99	61.258	ENSPMGG00000014950	rpusd1	98	61.921	Periophthalmus_magnuspinnatus
ENSGAGG00000004181	RPUSD1	99	65.789	ENSPEMG00000000497	Rpusd1	99	65.064	Peromyscus_maniculatus_bairdii
ENSGAGG00000004181	RPUSD1	99	50.482	ENSPMAG00000001563	rpusd1	99	51.447	Petromyzon_marinus
ENSGAGG00000004181	RPUSD1	99	74.834	ENSPCIG00000021216	-	93	74.834	Phascolarctos_cinereus
ENSGAGG00000004181	RPUSD1	99	63.123	ENSPFOG00000007946	rpusd1	98	63.123	Poecilia_formosa
ENSGAGG00000004181	RPUSD1	99	63.123	ENSPLAG00000011925	rpusd1	98	63.123	Poecilia_latipinna
ENSGAGG00000004181	RPUSD1	99	62.458	ENSPMEG00000002910	rpusd1	98	62.458	Poecilia_mexicana
ENSGAGG00000004181	RPUSD1	99	61.921	ENSPREG00000019851	rpusd1	98	61.921	Poecilia_reticulata
ENSGAGG00000004181	RPUSD1	99	50.820	ENSPCAG00000002258	RPUSD1	99	50.820	Procavia_capensis
ENSGAGG00000004181	RPUSD1	99	64.610	ENSPCOG00000022582	RPUSD1	99	64.610	Propithecus_coquereli
ENSGAGG00000004181	RPUSD1	99	61.635	ENSPVAG00000013104	RPUSD1	99	63.312	Pteropus_vampyrus
ENSGAGG00000004181	RPUSD1	99	61.438	ENSPNYG00000024076	rpusd1	98	61.667	Pundamilia_nyererei
ENSGAGG00000004181	RPUSD1	99	58.940	ENSPNAG00000013806	rpusd1	99	58.940	Pygocentrus_nattereri
ENSGAGG00000004181	RPUSD1	99	66.118	ENSRNOG00000023639	Rpusd1	99	66.447	Rattus_norvegicus
ENSGAGG00000004181	RPUSD1	99	65.049	ENSRBIG00000030238	RPUSD1	79	85.437	Rhinopithecus_bieti
ENSGAGG00000004181	RPUSD1	99	65.049	ENSRROG00000036663	RPUSD1	79	85.437	Rhinopithecus_roxellana
ENSGAGG00000004181	RPUSD1	99	64.474	ENSSBOG00000033063	RPUSD1	99	64.474	Saimiri_boliviensis_boliviensis
ENSGAGG00000004181	RPUSD1	99	74.172	ENSSHAG00000013500	RPUSD1	99	74.172	Sarcophilus_harrisii
ENSGAGG00000004181	RPUSD1	99	66.887	ENSSFOG00015014394	rpusd1	99	66.887	Scleropages_formosus
ENSGAGG00000004181	RPUSD1	99	59.935	ENSSMAG00000008045	rpusd1	91	61.184	Scophthalmus_maximus
ENSGAGG00000004181	RPUSD1	87	68.182	ENSSDUG00000001829	rpusd1	95	62.829	Seriola_dumerili
ENSGAGG00000004181	RPUSD1	87	68.182	ENSSLDG00000020853	rpusd1	95	62.829	Seriola_lalandi_dorsalis
ENSGAGG00000004181	RPUSD1	54	77.246	ENSSARG00000011187	-	100	77.246	Sorex_araneus
ENSGAGG00000004181	RPUSD1	63	75.916	ENSSPUG00000005119	-	99	75.916	Sphenodon_punctatus
ENSGAGG00000004181	RPUSD1	99	61.513	ENSSPAG00000012708	rpusd1	98	61.438	Stegastes_partitus
ENSGAGG00000004181	RPUSD1	99	64.610	ENSSSCG00000008000	RPUSD1	98	72.835	Sus_scrofa
ENSGAGG00000004181	RPUSD1	83	89.328	ENSTGUG00000015375	RPUSD1	100	89.328	Taeniopygia_guttata
ENSGAGG00000004181	RPUSD1	99	61.688	ENSTRUG00000003041	rpusd1	98	61.688	Takifugu_rubripes
ENSGAGG00000004181	RPUSD1	99	57.000	ENSTNIG00000002660	rpusd1	99	57.000	Tetraodon_nigroviridis
ENSGAGG00000004181	RPUSD1	99	65.909	ENSTTRG00000010167	RPUSD1	99	66.019	Tursiops_truncatus
ENSGAGG00000004181	RPUSD1	99	65.461	ENSUAMG00000012736	RPUSD1	99	65.461	Ursus_americanus
ENSGAGG00000004181	RPUSD1	99	65.574	ENSUMAG00000021174	RPUSD1	92	72.835	Ursus_maritimus
ENSGAGG00000004181	RPUSD1	99	66.447	ENSVVUG00000012357	RPUSD1	99	66.447	Vulpes_vulpes
ENSGAGG00000004181	RPUSD1	99	71.192	ENSXETG00000007184	rpusd1	99	71.192	Xenopus_tropicalis
ENSGAGG00000004181	RPUSD1	99	60.927	ENSXCOG00000017930	rpusd1	98	60.927	Xiphophorus_couchianus
ENSGAGG00000004181	RPUSD1	99	60.065	ENSXMAG00000024084	rpusd1	98	60.065	Xiphophorus_maculatus