EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000004371 (Gene tree)
Gene ID: -
Gene Symbol: RBBP6
Alias: P2P-R|PACT|SNAMA
Full Name: RB binding protein 6%2C ubiquitin ligase
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 49362 bases
Position: chrPPEB01002337.1:34506-83867
Accession: 9889
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000005423	zf-CCHC_2	PF13696.6	3.4e-09	1	1
ENSGAGP00000005420	zf-CCHC_2	PF13696.6	3.5e-09	1	1
ENSGAGP00000005416	zf-CCHC_2	PF13696.6	3.7e-09	1	1
ENSGAGP00000005409	zf-CCHC_2	PF13696.6	3.8e-09	1	1
ENSGAGP00000005386	zf-CCHC_2	PF13696.6	3.9e-09	1	1
ENSGAGP00000005394	zf-CCHC_2	PF13696.6	3.9e-09	1	1
ENSGAGP00000005399	zf-CCHC_2	PF13696.6	3.9e-09	1	1
ENSGAGP00000005408	zf-CCHC_2	PF13696.6	3.9e-09	1	1
ENSGAGP00000005416	zf-CCHC	PF00098.23	7.8e-05	1	1
ENSGAGP00000005423	zf-CCHC	PF00098.23	8.5e-05	1	1
ENSGAGP00000005409	zf-CCHC	PF00098.23	8.6e-05	1	1
ENSGAGP00000005386	zf-CCHC	PF00098.23	8.7e-05	1	1
ENSGAGP00000005394	zf-CCHC	PF00098.23	8.7e-05	1	1
ENSGAGP00000005399	zf-CCHC	PF00098.23	8.7e-05	1	1
ENSGAGP00000005408	zf-CCHC	PF00098.23	8.7e-05	1	1
ENSGAGP00000005420	zf-CCHC	PF00098.23	8.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000006271	RBBP6-201	5865	-	ENSGAGP00000005386	1775 (aa)	-	-
ENSGAGT00000006300	RBBP6-205	5826	-	ENSGAGP00000005409	1762 (aa)	-	-
ENSGAGT00000006296	RBBP6-204	5865	-	ENSGAGP00000005408	1775 (aa)	-	-
ENSGAGT00000006314	RBBP6-208	5367	-	ENSGAGP00000005423	1629 (aa)	-	-
ENSGAGT00000006285	RBBP6-203	5865	-	ENSGAGP00000005399	1775 (aa)	-	-
ENSGAGT00000006311	RBBP6-207	5477	-	ENSGAGP00000005420	1634 (aa)	-	-
ENSGAGT00000006307	RBBP6-206	5499	-	ENSGAGP00000005416	1653 (aa)	-	-
ENSGAGT00000006279	RBBP6-202	5865	-	ENSGAGP00000005394	1775 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000004371's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000004371's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000004371	RBBP6	95	80.189	ENSG00000122257	RBBP6	100	96.333	Homo_sapiens
ENSGAGG00000004371	RBBP6	94	81.853	ENSAMEG00000009312	RBBP6	88	81.154	Ailuropoda_melanoleuca
ENSGAGG00000004371	RBBP6	90	80.019	ENSAPLG00000009569	RBBP6	95	81.197	Anas_platyrhynchos
ENSGAGG00000004371	RBBP6	52	71.805	ENSACAG00000011794	RBBP6	100	72.816	Anolis_carolinensis
ENSGAGG00000004371	RBBP6	95	80.843	ENSANAG00000037384	RBBP6	96	83.683	Aotus_nancymaae
ENSGAGG00000004371	RBBP6	94	81.609	ENSBTAG00000009441	RBBP6	89	81.190	Bos_taurus
ENSGAGG00000004371	RBBP6	95	77.969	ENSCJAG00000020661	RBBP6	96	83.683	Callithrix_jacchus
ENSGAGG00000004371	RBBP6	96	81.226	ENSCAFG00000017566	RBBP6	92	80.725	Canis_familiaris
ENSGAGG00000004371	RBBP6	100	81.382	ENSCHIG00000013732	RBBP6	96	81.382	Capra_hircus
ENSGAGG00000004371	RBBP6	94	80.189	ENSTSYG00000000822	RBBP6	96	86.946	Carlito_syrichta
ENSGAGG00000004371	RBBP6	93	68.018	ENSCAPG00000012399	RBBP6	94	67.884	Cavia_aperea
ENSGAGG00000004371	RBBP6	93	75.432	ENSCPOG00000040025	RBBP6	89	76.008	Cavia_porcellus
ENSGAGG00000004371	RBBP6	95	80.843	ENSCCAG00000023229	RBBP6	96	87.179	Cebus_capucinus
ENSGAGG00000004371	RBBP6	95	80.000	ENSCATG00000033601	RBBP6	96	87.179	Cercocebus_atys
ENSGAGG00000004371	RBBP6	94	80.651	ENSCLAG00000009872	RBBP6	89	79.846	Chinchilla_lanigera
ENSGAGG00000004371	RBBP6	95	80.189	ENSCSAG00000006609	RBBP6	89	80.806	Chlorocebus_sabaeus
ENSGAGG00000004371	RBBP6	64	85.047	ENSCHOG00000000278	RBBP6	62	85.047	Choloepus_hoffmanni
ENSGAGG00000004371	RBBP6	100	98.043	ENSCPBG00000001818	RBBP6	100	98.043	Chrysemys_picta_bellii
ENSGAGG00000004371	RBBP6	95	80.189	ENSCANG00000039613	RBBP6	96	87.179	Colobus_angolensis_palliatus
ENSGAGG00000004371	RBBP6	94	80.460	ENSCGRG00001017193	Rbbp6	88	80.230	Cricetulus_griseus_chok1gshd
ENSGAGG00000004371	RBBP6	94	80.460	ENSCGRG00000011887	Rbbp6	88	80.230	Cricetulus_griseus_crigri
ENSGAGG00000004371	RBBP6	100	80.907	ENSDNOG00000048802	RBBP6	95	81.382	Dasypus_novemcinctus
ENSGAGG00000004371	RBBP6	95	77.083	ENSDORG00000010285	Rbbp6	90	77.885	Dipodomys_ordii
ENSGAGG00000004371	RBBP6	90	77.204	ENSEEUG00000001683	RBBP6	87	77.419	Erinaceus_europaeus
ENSGAGG00000004371	RBBP6	94	81.766	ENSFCAG00000043694	RBBP6	96	88.318	Felis_catus
ENSGAGG00000004371	RBBP6	92	78.679	ENSFALG00000003750	RBBP6	95	78.870	Ficedula_albicollis
ENSGAGG00000004371	RBBP6	93	77.950	ENSFDAG00000013132	RBBP6	89	77.927	Fukomys_damarensis
ENSGAGG00000004371	RBBP6	98	82.309	ENSGALG00000006043	RBBP6	86	82.619	Gallus_gallus
ENSGAGG00000004371	RBBP6	95	80.000	ENSGGOG00000007137	RBBP6	96	87.179	Gorilla_gorilla
ENSGAGG00000004371	RBBP6	94	78.143	ENSHGLG00000008327	RBBP6	89	78.337	Heterocephalus_glaber_female
ENSGAGG00000004371	RBBP6	93	80.843	ENSSTOG00000016006	RBBP6	89	80.614	Ictidomys_tridecemlineatus
ENSGAGG00000004371	RBBP6	94	78.327	ENSJJAG00000014549	Rbbp6	89	79.151	Jaculus_jaculus
ENSGAGG00000004371	RBBP6	99	71.719	ENSLACG00000012333	RBBP6	90	71.563	Latimeria_chalumnae
ENSGAGG00000004371	RBBP6	98	66.789	ENSLOCG00000005487	RBBP6	87	66.603	Lepisosteus_oculatus
ENSGAGG00000004371	RBBP6	94	79.962	ENSLAFG00000009528	RBBP6	89	80.998	Loxodonta_africana
ENSGAGG00000004371	RBBP6	95	80.189	ENSMFAG00000038627	RBBP6	96	87.413	Macaca_fascicularis
ENSGAGG00000004371	RBBP6	95	80.189	ENSMMUG00000015908	RBBP6	96	87.413	Macaca_mulatta
ENSGAGG00000004371	RBBP6	95	80.000	ENSMNEG00000033630	RBBP6	96	87.413	Macaca_nemestrina
ENSGAGG00000004371	RBBP6	95	80.189	ENSMLEG00000030073	RBBP6	96	87.413	Mandrillus_leucophaeus
ENSGAGG00000004371	RBBP6	93	79.765	ENSMGAG00000006423	RBBP6	94	80.291	Meleagris_gallopavo
ENSGAGG00000004371	RBBP6	94	80.189	ENSMICG00000008059	RBBP6	89	87.179	Microcebus_murinus
ENSGAGG00000004371	RBBP6	92	78.202	ENSMODG00000016318	-	92	78.202	Monodelphis_domestica
ENSGAGG00000004371	RBBP6	72	75.477	MGP_CAROLIEiJ_G0030424	-	96	74.394	Mus_caroli
ENSGAGG00000004371	RBBP6	94	79.924	ENSMUSG00000030779	Rbbp6	98	71.995	Mus_musculus
ENSGAGG00000004371	RBBP6	93	79.541	MGP_PahariEiJ_G0013634	Rbbp6	94	72.973	Mus_pahari
ENSGAGG00000004371	RBBP6	94	80.077	MGP_SPRETEiJ_G0031538	Rbbp6	88	79.885	Mus_spretus
ENSGAGG00000004371	RBBP6	94	81.226	ENSMPUG00000012318	RBBP6	89	80.534	Mustela_putorius_furo
ENSGAGG00000004371	RBBP6	94	79.121	ENSMLUG00000010601	-	91	78.755	Myotis_lucifugus
ENSGAGG00000004371	RBBP6	93	77.736	ENSNGAG00000002381	Rbbp6	90	77.927	Nannospalax_galili
ENSGAGG00000004371	RBBP6	93	79.271	ENSNLEG00000011896	RBBP6	96	87.179	Nomascus_leucogenys
ENSGAGG00000004371	RBBP6	82	82.275	ENSMEUG00000014491	RBBP6	81	82.275	Notamacropus_eugenii
ENSGAGG00000004371	RBBP6	58	86.700	ENSOPRG00000016272	RBBP6	57	85.961	Ochotona_princeps
ENSGAGG00000004371	RBBP6	93	77.927	ENSODEG00000012319	RBBP6	89	77.543	Octodon_degus
ENSGAGG00000004371	RBBP6	95	77.305	ENSOANG00000007673	RBBP6	92	77.808	Ornithorhynchus_anatinus
ENSGAGG00000004371	RBBP6	98	77.477	ENSOCUG00000004346	RBBP6	94	80.998	Oryctolagus_cuniculus
ENSGAGG00000004371	RBBP6	94	79.773	ENSOGAG00000026986	RBBP6	89	80.614	Otolemur_garnettii
ENSGAGG00000004371	RBBP6	94	80.566	ENSOARG00000017741	RBBP6	90	80.566	Ovis_aries
ENSGAGG00000004371	RBBP6	95	79.310	ENSPPAG00000023595	RBBP6	90	79.079	Pan_paniscus
ENSGAGG00000004371	RBBP6	94	81.766	ENSPPRG00000004074	RBBP6	96	88.318	Panthera_pardus
ENSGAGG00000004371	RBBP6	94	81.766	ENSPTIG00000010342	RBBP6	96	88.318	Panthera_tigris_altaica
ENSGAGG00000004371	RBBP6	95	80.189	ENSPTRG00000007897	RBBP6	96	87.413	Pan_troglodytes
ENSGAGG00000004371	RBBP6	95	80.377	ENSPANG00000019625	RBBP6	96	87.646	Papio_anubis
ENSGAGG00000004371	RBBP6	70	64.794	ENSPKIG00000018682	RBBP6	87	65.854	Paramormyrops_kingsleyae
ENSGAGG00000004371	RBBP6	97	95.175	ENSPSIG00000004108	RBBP6	99	93.430	Pelodiscus_sinensis
ENSGAGG00000004371	RBBP6	94	83.779	ENSPCIG00000014000	RBBP6	90	83.397	Phascolarctos_cinereus
ENSGAGG00000004371	RBBP6	90	81.034	ENSPPYG00000007201	RBBP6	83	80.806	Pongo_abelii
ENSGAGG00000004371	RBBP6	94	80.000	ENSPCOG00000021939	RBBP6	89	87.179	Propithecus_coquereli
ENSGAGG00000004371	RBBP6	83	76.792	ENSPVAG00000001110	RBBP6	77	76.775	Pteropus_vampyrus
ENSGAGG00000004371	RBBP6	94	80.306	ENSRNOG00000012806	Rbbp6	88	80.077	Rattus_norvegicus
ENSGAGG00000004371	RBBP6	90	78.269	ENSRBIG00000004517	RBBP6	97	82.227	Rhinopithecus_bieti
ENSGAGG00000004371	RBBP6	95	80.000	ENSRROG00000032092	RBBP6	96	87.413	Rhinopithecus_roxellana
ENSGAGG00000004371	RBBP6	95	78.302	ENSSBOG00000021666	RBBP6	96	83.683	Saimiri_boliviensis_boliviensis
ENSGAGG00000004371	RBBP6	93	82.409	ENSSHAG00000004727	-	89	82.409	Sarcophilus_harrisii
ENSGAGG00000004371	RBBP6	94	79.665	ENSSARG00000004977	RBBP6	93	79.187	Sorex_araneus
ENSGAGG00000004371	RBBP6	94	81.958	ENSSSCG00000007830	RBBP6	89	81.574	Sus_scrofa
ENSGAGG00000004371	RBBP6	94	78.241	ENSTGUG00000006185	RBBP6	94	77.549	Taeniopygia_guttata
ENSGAGG00000004371	RBBP6	94	76.749	ENSTTRG00000002696	RBBP6	89	77.885	Tursiops_truncatus
ENSGAGG00000004371	RBBP6	94	78.927	ENSUMAG00000008537	RBBP6	88	78.053	Ursus_maritimus
ENSGAGG00000004371	RBBP6	63	81.287	ENSVPAG00000006458	RBBP6	79	77.067	Vicugna_pacos
ENSGAGG00000004371	RBBP6	94	81.226	ENSVVUG00000005484	RBBP6	89	80.725	Vulpes_vulpes