EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000004393 (Gene tree)
Gene ID: -
Gene Symbol: GAR1
Alias: NOLA1
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 5078 bases
Position: chrPPEB01003055.1:6105-11182
Accession: 14264
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000005411	Gar1	PF04410.14	8.9e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000006302	GAR1-201	683	-	ENSGAGP00000005411	196 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000004393's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000004393's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000004393	GAR1	55	90.654	ENSAMEG00000004605	GAR1	51	92.308	Ailuropoda_melanoleuca
ENSGAGG00000004393	GAR1	54	94.340	ENSAPLG00000010926	GAR1	59	94.340	Anas_platyrhynchos
ENSGAGG00000004393	GAR1	55	90.741	ENSBTAG00000000748	GAR1	50	93.269	Bos_taurus
ENSGAGG00000004393	GAR1	54	91.509	ENSCAFG00020015566	GAR1	54	93.269	Canis_lupus_dingo
ENSGAGG00000004393	GAR1	56	90.826	ENSCHIG00000016026	-	50	93.269	Capra_hircus
ENSGAGG00000004393	GAR1	50	85.714	ENSCHIG00000011049	-	68	78.571	Capra_hircus
ENSGAGG00000004393	GAR1	55	82.407	ENSTSYG00000026632	-	73	70.833	Carlito_syrichta
ENSGAGG00000004393	GAR1	56	90.826	ENSCATG00000021854	GAR1	53	93.269	Cercocebus_atys
ENSGAGG00000004393	GAR1	56	89.908	ENSCLAG00000005335	GAR1	66	96.226	Chinchilla_lanigera
ENSGAGG00000004393	GAR1	55	91.589	ENSCSAG00000003922	GAR1	53	93.269	Chlorocebus_sabaeus
ENSGAGG00000004393	GAR1	98	96.954	ENSCPBG00000004310	GAR1	99	96.954	Chrysemys_picta_bellii
ENSGAGG00000004393	GAR1	50	69.388	ENSCING00000005744	-	51	66.990	Ciona_intestinalis
ENSGAGG00000004393	GAR1	82	52.795	ENSCSAVG00000006355	-	50	68.000	Ciona_savignyi
ENSGAGG00000004393	GAR1	53	93.269	ENSCVAG00000002103	gar1	50	93.269	Cyprinodon_variegatus
ENSGAGG00000004393	GAR1	55	90.654	ENSDNOG00000037632	GAR1	53	92.308	Dasypus_novemcinctus
ENSGAGG00000004393	GAR1	62	90.164	ENSEASG00005004658	GAR1	57	83.065	Equus_asinus_asinus
ENSGAGG00000004393	GAR1	62	89.344	ENSECAG00000013624	GAR1	53	93.269	Equus_caballus
ENSGAGG00000004393	GAR1	62	89.256	ENSFCAG00000040791	-	59	82.258	Felis_catus
ENSGAGG00000004393	GAR1	84	82.203	ENSGMOG00000012419	gar1	73	78.049	Gadus_morhua
ENSGAGG00000004393	GAR1	56	72.477	ENSGGOG00000036205	-	52	74.038	Gorilla_gorilla
ENSGAGG00000004393	GAR1	61	91.597	ENSHGLG00000000493	GAR1	70	98.113	Heterocephalus_glaber_female
ENSGAGG00000004393	GAR1	55	90.741	ENSIPUG00000003194	gar1	60	82.540	Ictalurus_punctatus
ENSGAGG00000004393	GAR1	55	89.720	ENSSTOG00000005577	GAR1	69	96.226	Ictidomys_tridecemlineatus
ENSGAGG00000004393	GAR1	55	90.654	ENSJJAG00000010063	Gar1	58	82.171	Jaculus_jaculus
ENSGAGG00000004393	GAR1	53	91.346	ENSLBEG00000015647	gar1	64	78.125	Labrus_bergylta
ENSGAGG00000004393	GAR1	81	88.596	ENSLACG00000003306	GAR1	86	85.039	Latimeria_chalumnae
ENSGAGG00000004393	GAR1	55	77.570	ENSMFAG00000003572	-	51	78.846	Macaca_fascicularis
ENSGAGG00000004393	GAR1	54	94.286	ENSMAUG00000016788	Gar1	67	98.113	Mesocricetus_auratus
ENSGAGG00000004393	GAR1	56	90.000	ENSMICG00000003326	GAR1	56	85.950	Microcebus_murinus
ENSGAGG00000004393	GAR1	54	93.333	ENSMOCG00000001340	Gar1	67	98.113	Microtus_ochrogaster
ENSGAGG00000004393	GAR1	72	76.761	ENSMMOG00000004156	gar1	51	92.308	Mola_mola
ENSGAGG00000004393	GAR1	54	89.623	ENSMODG00000005897	GAR1	66	74.051	Monodelphis_domestica
ENSGAGG00000004393	GAR1	54	93.333	MGP_CAROLIEiJ_G0025627	Gar1	67	98.113	Mus_caroli
ENSGAGG00000004393	GAR1	56	90.826	ENSMUSG00000028010	Gar1	67	98.113	Mus_musculus
ENSGAGG00000004393	GAR1	56	90.826	MGP_PahariEiJ_G0027076	Gar1	67	98.113	Mus_pahari
ENSGAGG00000004393	GAR1	56	90.826	MGP_SPRETEiJ_G0026580	Gar1	67	98.113	Mus_spretus
ENSGAGG00000004393	GAR1	62	89.256	ENSMPUG00000008615	GAR1	59	82.258	Mustela_putorius_furo
ENSGAGG00000004393	GAR1	56	90.826	ENSNGAG00000008268	Gar1	69	96.226	Nannospalax_galili
ENSGAGG00000004393	GAR1	70	67.153	ENSNLEG00000034282	-	52	76.923	Nomascus_leucogenys
ENSGAGG00000004393	GAR1	54	91.429	ENSODEG00000011083	GAR1	54	92.308	Octodon_degus
ENSGAGG00000004393	GAR1	55	92.523	ENSOCUG00000003901	GAR1	56	87.500	Oryctolagus_cuniculus
ENSGAGG00000004393	GAR1	55	91.589	ENSPPAG00000014081	GAR1	52	93.269	Pan_paniscus
ENSGAGG00000004393	GAR1	62	89.256	ENSPPRG00000023697	GAR1	59	82.258	Panthera_pardus
ENSGAGG00000004393	GAR1	62	89.256	ENSPTIG00000021565	GAR1	59	82.258	Panthera_tigris_altaica
ENSGAGG00000004393	GAR1	56	90.826	ENSPTRG00000016364	GAR1	53	93.269	Pan_troglodytes
ENSGAGG00000004393	GAR1	54	94.286	ENSPEMG00000015838	Gar1	67	98.113	Peromyscus_maniculatus_bairdii
ENSGAGG00000004393	GAR1	54	89.623	ENSPCIG00000018912	GAR1	50	85.593	Phascolarctos_cinereus
ENSGAGG00000004393	GAR1	53	93.269	ENSPMEG00000009320	gar1	50	93.269	Poecilia_mexicana
ENSGAGG00000004393	GAR1	79	79.339	ENSPCAG00000015897	GAR1	78	76.860	Procavia_capensis
ENSGAGG00000004393	GAR1	55	91.589	ENSPCOG00000027049	GAR1	53	93.269	Propithecus_coquereli
ENSGAGG00000004393	GAR1	55	93.458	ENSRNOG00000061146	Gar1	61	95.192	Rattus_norvegicus
ENSGAGG00000004393	GAR1	53	93.269	ENSRBIG00000019547	GAR1	53	93.269	Rhinopithecus_bieti
ENSGAGG00000004393	GAR1	57	74.107	ENSRBIG00000042411	-	50	75.962	Rhinopithecus_bieti
ENSGAGG00000004393	GAR1	56	90.826	ENSRROG00000028454	GAR1	53	93.269	Rhinopithecus_roxellana
ENSGAGG00000004393	GAR1	65	90.076	ENSSPUG00000008707	GAR1	73	87.786	Sphenodon_punctatus
ENSGAGG00000004393	GAR1	62	89.344	ENSSSCG00000009137	GAR1	61	82.258	Sus_scrofa
ENSGAGG00000004393	GAR1	50	93.878	ENSTGUG00000004185	GAR1	67	93.878	Taeniopygia_guttata
ENSGAGG00000004393	GAR1	53	90.385	ENSTRUG00000020580	gar1	50	90.385	Takifugu_rubripes
ENSGAGG00000004393	GAR1	53	93.204	ENSTNIG00000013023	gar1	59	93.269	Tetraodon_nigroviridis
ENSGAGG00000004393	GAR1	54	91.509	ENSUAMG00000005652	GAR1	54	93.269	Ursus_americanus
ENSGAGG00000004393	GAR1	62	89.256	ENSUMAG00000000776	GAR1	60	82.258	Ursus_maritimus
ENSGAGG00000004393	GAR1	80	89.256	ENSVPAG00000009844	GAR1	72	82.258	Vicugna_pacos
ENSGAGG00000004393	GAR1	62	89.256	ENSVVUG00000017612	GAR1	64	82.258	Vulpes_vulpes