EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000004839 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 1314 bases
Position: chrPPEB01020768.1:182-1495
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000005952	RRM_1	PF00076.22	1.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000006939	-	300	-	ENSGAGP00000005952	100 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000004839's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000004839's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000004839	-	81	100.000	ENSGAGG00000002259	-	93	100.000
ENSGAGG00000004839	-	100	93.000	ENSGAGG00000002268	-	99	93.000
ENSGAGG00000004839	-	68	98.529	ENSGAGG00000010376	-	86	98.529
ENSGAGG00000004839	-	100	85.294	ENSGAGG00000001685	-	94	85.294
ENSGAGG00000004839	-	75	92.000	ENSGAGG00000002984	-	95	92.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000004839	-	83	61.905	ENSG00000198000	NOL8	83	61.905	Homo_sapiens
ENSGAGG00000004839	-	84	50.588	ENSAPOG00000008905	-	69	50.588	Acanthochromis_polyacanthus
ENSGAGG00000004839	-	68	58.824	ENSAOCG00000003570	-	75	58.824	Amphiprion_ocellaris
ENSGAGG00000004839	-	68	58.824	ENSAPEG00000004400	-	75	58.824	Amphiprion_percula
ENSGAGG00000004839	-	83	61.905	ENSANAG00000033271	NOL8	67	61.905	Aotus_nancymaae
ENSGAGG00000004839	-	82	54.217	ENSAMXG00000029217	-	79	54.217	Astyanax_mexicanus
ENSGAGG00000004839	-	83	60.714	ENSCJAG00000039875	NOL8	66	60.714	Callithrix_jacchus
ENSGAGG00000004839	-	83	57.143	ENSCPOG00000031767	-	89	57.143	Cavia_porcellus
ENSGAGG00000004839	-	83	55.422	ENSCCAG00000026399	NOL8	73	66.667	Cebus_capucinus
ENSGAGG00000004839	-	90	55.435	ENSCATG00000038353	-	74	58.140	Cercocebus_atys
ENSGAGG00000004839	-	90	58.242	ENSCGRG00001016459	-	97	58.242	Cricetulus_griseus_chok1gshd
ENSGAGG00000004839	-	90	58.242	ENSCGRG00000016885	-	97	58.242	Cricetulus_griseus_crigri
ENSGAGG00000004839	-	84	45.882	ENSCSEG00000012803	-	90	45.882	Cynoglossus_semilaevis
ENSGAGG00000004839	-	84	49.412	ENSCVAG00000009871	-	88	49.412	Cyprinodon_variegatus
ENSGAGG00000004839	-	83	55.952	ENSDORG00000025458	-	89	55.952	Dipodomys_ordii
ENSGAGG00000004839	-	90	54.945	ENSEASG00005013182	NOL8	65	58.333	Equus_asinus_asinus
ENSGAGG00000004839	-	90	53.846	ENSFCAG00000000818	NOL8	71	53.846	Felis_catus
ENSGAGG00000004839	-	90	52.747	ENSFDAG00000016216	-	97	52.747	Fukomys_damarensis
ENSGAGG00000004839	-	87	52.273	ENSFHEG00000017935	-	91	52.273	Fundulus_heteroclitus
ENSGAGG00000004839	-	84	52.941	ENSGAFG00000001708	-	77	52.941	Gambusia_affinis
ENSGAGG00000004839	-	81	53.659	ENSGGOG00000023838	-	81	53.659	Gorilla_gorilla
ENSGAGG00000004839	-	90	53.846	ENSHGLG00000010060	-	89	57.143	Heterocephalus_glaber_female
ENSGAGG00000004839	-	81	57.317	ENSHGLG00000001400	-	50	57.317	Heterocephalus_glaber_female
ENSGAGG00000004839	-	83	57.143	ENSHGLG00100012858	-	89	57.143	Heterocephalus_glaber_male
ENSGAGG00000004839	-	83	57.143	ENSHGLG00100002570	-	63	57.143	Heterocephalus_glaber_male
ENSGAGG00000004839	-	81	57.317	ENSHGLG00100012643	-	50	57.317	Heterocephalus_glaber_male
ENSGAGG00000004839	-	68	57.353	ENSHCOG00000012856	nol8	57	57.353	Hippocampus_comes
ENSGAGG00000004839	-	83	59.524	ENSJJAG00000011518	-	65	59.524	Jaculus_jaculus
ENSGAGG00000004839	-	83	61.905	ENSMFAG00000034500	NOL8	83	61.905	Macaca_fascicularis
ENSGAGG00000004839	-	90	56.522	ENSMFAG00000031716	-	78	56.522	Macaca_fascicularis
ENSGAGG00000004839	-	83	61.905	ENSMMUG00000004629	NOL8	65	61.905	Macaca_mulatta
ENSGAGG00000004839	-	90	56.522	ENSMNEG00000005430	-	73	59.302	Macaca_nemestrina
ENSGAGG00000004839	-	83	61.905	ENSMNEG00000036927	NOL8	83	61.905	Macaca_nemestrina
ENSGAGG00000004839	-	91	56.044	ENSMLEG00000035584	-	79	56.044	Mandrillus_leucophaeus
ENSGAGG00000004839	-	83	60.714	ENSMLEG00000037641	NOL8	83	60.714	Mandrillus_leucophaeus
ENSGAGG00000004839	-	90	47.253	ENSMAMG00000000989	-	97	47.253	Mastacembelus_armatus
ENSGAGG00000004839	-	90	57.143	ENSMAUG00000008173	-	97	57.143	Mesocricetus_auratus
ENSGAGG00000004839	-	90	54.945	ENSMOCG00000008757	-	97	54.945	Microtus_ochrogaster
ENSGAGG00000004839	-	86	48.276	ENSMMOG00000013534	-	86	48.276	Mola_mola
ENSGAGG00000004839	-	84	48.235	ENSMALG00000022669	-	88	48.235	Monopterus_albus
ENSGAGG00000004839	-	90	56.044	ENSMUSG00000021392	Nol8	98	56.044	Mus_musculus
ENSGAGG00000004839	-	83	53.571	ENSNGAG00000021592	-	89	53.571	Nannospalax_galili
ENSGAGG00000004839	-	84	51.765	ENSNBRG00000012679	-	65	51.765	Neolamprologus_brichardi
ENSGAGG00000004839	-	90	59.341	ENSNLEG00000016357	NOL8	90	59.341	Nomascus_leucogenys
ENSGAGG00000004839	-	84	55.294	ENSNLEG00000028854	-	77	55.294	Nomascus_leucogenys
ENSGAGG00000004839	-	83	60.714	ENSPPAG00000002204	NOL8	83	60.714	Pan_paniscus
ENSGAGG00000004839	-	90	53.846	ENSPPRG00000008693	NOL8	71	53.846	Panthera_pardus
ENSGAGG00000004839	-	90	53.846	ENSPTIG00000015402	NOL8	71	53.846	Panthera_tigris_altaica
ENSGAGG00000004839	-	83	61.905	ENSPTRG00000021109	NOL8	83	61.905	Pan_troglodytes
ENSGAGG00000004839	-	83	61.905	ENSPANG00000024725	NOL8	83	61.905	Papio_anubis
ENSGAGG00000004839	-	84	60.465	ENSPANG00000031553	-	54	63.077	Papio_anubis
ENSGAGG00000004839	-	88	57.778	ENSPANG00000033194	-	83	57.778	Papio_anubis
ENSGAGG00000004839	-	68	57.353	ENSPMGG00000014670	-	53	57.353	Periophthalmus_magnuspinnatus
ENSGAGG00000004839	-	90	56.044	ENSPEMG00000012756	Nol8	89	59.524	Peromyscus_maniculatus_bairdii
ENSGAGG00000004839	-	84	55.294	ENSPLAG00000008235	-	91	55.294	Poecilia_latipinna
ENSGAGG00000004839	-	84	55.294	ENSPMEG00000006567	-	91	55.294	Poecilia_mexicana
ENSGAGG00000004839	-	84	54.118	ENSPREG00000010175	-	88	54.118	Poecilia_reticulata
ENSGAGG00000004839	-	86	49.425	ENSPNYG00000002021	-	81	49.425	Pundamilia_nyererei
ENSGAGG00000004839	-	90	55.435	ENSRBIG00000011855	-	81	55.435	Rhinopithecus_bieti
ENSGAGG00000004839	-	88	59.551	ENSRROG00000043673	NOL8	82	62.651	Rhinopithecus_roxellana
ENSGAGG00000004839	-	90	53.261	ENSRROG00000033368	-	81	53.261	Rhinopithecus_roxellana
ENSGAGG00000004839	-	83	60.714	ENSSBOG00000024228	NOL8	83	60.714	Saimiri_boliviensis_boliviensis
ENSGAGG00000004839	-	73	58.904	ENSSMAG00000004064	-	77	58.904	Scophthalmus_maximus
ENSGAGG00000004839	-	84	48.235	ENSSLDG00000007021	-	89	48.235	Seriola_lalandi_dorsalis
ENSGAGG00000004839	-	85	53.488	ENSTRUG00000009278	nol8	76	53.488	Takifugu_rubripes
ENSGAGG00000004839	-	84	51.765	ENSXMAG00000027913	-	77	51.765	Xiphophorus_maculatus