EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000004884 (Gene tree)
Gene ID: -
Gene Symbol: XRN2
Alias: -
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 88579 bases
Position: chrPPEB01000013.1:398712-487290
Accession: 12836
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000006012	XRN_N	PF03159.18	3.3e-102	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000007003	XRN2-201	4765	-	ENSGAGP00000006012	958 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000004884's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000004884's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000004884	XRN2	100	84.688	ENSG00000088930	XRN2	100	84.062	Homo_sapiens
ENSGAGG00000004884	XRN2	97	71.050	ENSAPOG00000009818	xrn2	100	70.092	Acanthochromis_polyacanthus
ENSGAGG00000004884	XRN2	100	85.104	ENSAMEG00000012581	XRN2	100	84.479	Ailuropoda_melanoleuca
ENSGAGG00000004884	XRN2	90	71.104	ENSACIG00000015047	xrn2	95	75.526	Amphilophus_citrinellus
ENSGAGG00000004884	XRN2	97	72.068	ENSAOCG00000023632	xrn2	100	70.892	Amphiprion_ocellaris
ENSGAGG00000004884	XRN2	97	71.792	ENSAPEG00000014871	xrn2	100	70.804	Amphiprion_percula
ENSGAGG00000004884	XRN2	95	73.060	ENSATEG00000001273	xrn2	98	72.450	Anabas_testudineus
ENSGAGG00000004884	XRN2	97	88.960	ENSAPLG00000013869	XRN2	99	88.639	Anas_platyrhynchos
ENSGAGG00000004884	XRN2	100	87.097	ENSACAG00000005565	XRN2	100	87.097	Anolis_carolinensis
ENSGAGG00000004884	XRN2	100	84.792	ENSANAG00000020126	XRN2	100	84.167	Aotus_nancymaae
ENSGAGG00000004884	XRN2	90	73.908	ENSACLG00000010522	xrn2	96	76.667	Astatotilapia_calliptera
ENSGAGG00000004884	XRN2	100	72.114	ENSAMXG00000018301	xrn2	100	71.910	Astyanax_mexicanus
ENSGAGG00000004884	XRN2	100	84.719	ENSBTAG00000011304	XRN2	100	84.200	Bos_taurus
ENSGAGG00000004884	XRN2	86	55.100	WBGene00006964	xrn-2	89	54.011	Caenorhabditis_elegans
ENSGAGG00000004884	XRN2	100	84.896	ENSCJAG00000005611	XRN2	100	84.271	Callithrix_jacchus
ENSGAGG00000004884	XRN2	100	85.417	ENSCAFG00000005185	XRN2	100	84.792	Canis_familiaris
ENSGAGG00000004884	XRN2	100	85.417	ENSCAFG00020027479	XRN2	100	84.792	Canis_lupus_dingo
ENSGAGG00000004884	XRN2	100	84.719	ENSCHIG00000006921	XRN2	100	84.200	Capra_hircus
ENSGAGG00000004884	XRN2	100	84.583	ENSTSYG00000008315	XRN2	100	83.958	Carlito_syrichta
ENSGAGG00000004884	XRN2	97	72.115	ENSCAPG00000010773	XRN2	99	69.658	Cavia_aperea
ENSGAGG00000004884	XRN2	100	84.792	ENSCPOG00000009407	XRN2	100	84.167	Cavia_porcellus
ENSGAGG00000004884	XRN2	100	84.896	ENSCATG00000040350	XRN2	100	84.271	Cercocebus_atys
ENSGAGG00000004884	XRN2	100	85.521	ENSCLAG00000013419	XRN2	100	85.104	Chinchilla_lanigera
ENSGAGG00000004884	XRN2	100	84.896	ENSCSAG00000011094	XRN2	100	84.271	Chlorocebus_sabaeus
ENSGAGG00000004884	XRN2	68	94.624	ENSCHOG00000013404	XRN2	70	94.624	Choloepus_hoffmanni
ENSGAGG00000004884	XRN2	100	98.747	ENSCPBG00000023533	XRN2	100	98.747	Chrysemys_picta_bellii
ENSGAGG00000004884	XRN2	85	60.932	ENSCING00000022336	-	100	61.649	Ciona_intestinalis
ENSGAGG00000004884	XRN2	89	58.343	ENSCSAVG00000011217	-	100	62.500	Ciona_savignyi
ENSGAGG00000004884	XRN2	100	84.896	ENSCANG00000040240	XRN2	100	84.271	Colobus_angolensis_palliatus
ENSGAGG00000004884	XRN2	98	84.081	ENSCGRG00001010676	Xrn2	99	84.509	Cricetulus_griseus_chok1gshd
ENSGAGG00000004884	XRN2	97	83.031	ENSCGRG00000006378	Xrn2	99	83.031	Cricetulus_griseus_crigri
ENSGAGG00000004884	XRN2	53	74.074	ENSCSEG00000005628	xrn2	100	73.828	Cynoglossus_semilaevis
ENSGAGG00000004884	XRN2	89	72.101	ENSCVAG00000018999	xrn2	98	77.524	Cyprinodon_variegatus
ENSGAGG00000004884	XRN2	100	70.654	ENSDARG00000101900	xrn2	96	79.159	Danio_rerio
ENSGAGG00000004884	XRN2	100	85.208	ENSDNOG00000001895	XRN2	100	84.583	Dasypus_novemcinctus
ENSGAGG00000004884	XRN2	100	83.750	ENSDORG00000005434	Xrn2	100	83.125	Dipodomys_ordii
ENSGAGG00000004884	XRN2	86	56.182	FBgn0031868	Rat1	91	54.756	Drosophila_melanogaster
ENSGAGG00000004884	XRN2	100	75.000	ENSETEG00000001740	XRN2	93	87.835	Echinops_telfairi
ENSGAGG00000004884	XRN2	84	71.308	ENSEBUG00000016136	xrn2	99	72.173	Eptatretus_burgeri
ENSGAGG00000004884	XRN2	100	84.583	ENSEASG00005002484	XRN2	100	83.958	Equus_asinus_asinus
ENSGAGG00000004884	XRN2	94	92.000	ENSECAG00000018988	XRN2	95	92.000	Equus_caballus
ENSGAGG00000004884	XRN2	80	92.000	ENSEEUG00000009265	XRN2	76	92.000	Erinaceus_europaeus
ENSGAGG00000004884	XRN2	100	70.010	ENSELUG00000000552	xrn2	100	71.385	Esox_lucius
ENSGAGG00000004884	XRN2	100	85.208	ENSFCAG00000007970	XRN2	100	84.583	Felis_catus
ENSGAGG00000004884	XRN2	100	88.425	ENSFALG00000004508	XRN2	100	88.425	Ficedula_albicollis
ENSGAGG00000004884	XRN2	100	85.000	ENSFDAG00000016311	XRN2	100	84.375	Fukomys_damarensis
ENSGAGG00000004884	XRN2	53	70.992	ENSFHEG00000013039	xrn2	98	70.992	Fundulus_heteroclitus
ENSGAGG00000004884	XRN2	86	74.545	ENSGMOG00000013436	xrn2	100	74.545	Gadus_morhua
ENSGAGG00000004884	XRN2	100	88.738	ENSGALG00000008372	XRN2	100	88.425	Gallus_gallus
ENSGAGG00000004884	XRN2	89	74.797	ENSGAFG00000014284	xrn2	98	74.797	Gambusia_affinis
ENSGAGG00000004884	XRN2	87	75.030	ENSGACG00000011870	xrn2	96	78.378	Gasterosteus_aculeatus
ENSGAGG00000004884	XRN2	100	84.896	ENSGGOG00000013738	XRN2	100	84.271	Gorilla_gorilla
ENSGAGG00000004884	XRN2	54	75.143	ENSHBUG00000005077	xrn2	96	76.667	Haplochromis_burtoni
ENSGAGG00000004884	XRN2	100	84.062	ENSHGLG00000014831	XRN2	100	83.333	Heterocephalus_glaber_female
ENSGAGG00000004884	XRN2	100	84.062	ENSHGLG00100013130	XRN2	100	83.333	Heterocephalus_glaber_male
ENSGAGG00000004884	XRN2	99	68.012	ENSHCOG00000011994	xrn2	94	73.086	Hippocampus_comes
ENSGAGG00000004884	XRN2	100	71.443	ENSIPUG00000006639	xrn2	100	71.443	Ictalurus_punctatus
ENSGAGG00000004884	XRN2	100	85.208	ENSSTOG00000000589	XRN2	100	84.583	Ictidomys_tridecemlineatus
ENSGAGG00000004884	XRN2	100	84.688	ENSJJAG00000022128	Xrn2	100	84.062	Jaculus_jaculus
ENSGAGG00000004884	XRN2	53	80.739	ENSLBEG00000010041	xrn2	100	80.271	Labrus_bergylta
ENSGAGG00000004884	XRN2	94	78.170	ENSLACG00000008307	XRN2	98	81.751	Latimeria_chalumnae
ENSGAGG00000004884	XRN2	99	74.610	ENSLOCG00000016874	xrn2	100	74.375	Lepisosteus_oculatus
ENSGAGG00000004884	XRN2	100	84.792	ENSLAFG00000014624	XRN2	100	84.167	Loxodonta_africana
ENSGAGG00000004884	XRN2	100	84.896	ENSMFAG00000038122	XRN2	100	84.271	Macaca_fascicularis
ENSGAGG00000004884	XRN2	100	84.896	ENSMMUG00000011405	XRN2	100	84.271	Macaca_mulatta
ENSGAGG00000004884	XRN2	100	85.000	ENSMNEG00000040626	XRN2	100	84.375	Macaca_nemestrina
ENSGAGG00000004884	XRN2	100	84.896	ENSMLEG00000041897	XRN2	100	84.271	Mandrillus_leucophaeus
ENSGAGG00000004884	XRN2	95	73.210	ENSMAMG00000008633	xrn2	95	72.845	Mastacembelus_armatus
ENSGAGG00000004884	XRN2	90	75.747	ENSMZEG00005022362	xrn2	97	75.922	Maylandia_zebra
ENSGAGG00000004884	XRN2	99	87.047	ENSMGAG00000003196	XRN2	98	88.123	Meleagris_gallopavo
ENSGAGG00000004884	XRN2	100	84.792	ENSMAUG00000021842	Xrn2	100	84.167	Mesocricetus_auratus
ENSGAGG00000004884	XRN2	100	84.583	ENSMICG00000008126	XRN2	100	83.958	Microcebus_murinus
ENSGAGG00000004884	XRN2	100	83.750	ENSMOCG00000012588	Xrn2	100	83.750	Microtus_ochrogaster
ENSGAGG00000004884	XRN2	89	74.914	ENSMMOG00000017576	xrn2	96	75.947	Mola_mola
ENSGAGG00000004884	XRN2	100	86.221	ENSMODG00000006163	XRN2	100	86.013	Monodelphis_domestica
ENSGAGG00000004884	XRN2	91	73.453	ENSMALG00000011355	xrn2	99	73.453	Monopterus_albus
ENSGAGG00000004884	XRN2	100	84.062	MGP_CAROLIEiJ_G0024400	Xrn2	100	83.646	Mus_caroli
ENSGAGG00000004884	XRN2	100	84.271	ENSMUSG00000027433	Xrn2	100	83.854	Mus_musculus
ENSGAGG00000004884	XRN2	100	84.062	MGP_PahariEiJ_G0025843	Xrn2	100	83.646	Mus_pahari
ENSGAGG00000004884	XRN2	100	84.271	MGP_SPRETEiJ_G0025318	Xrn2	94	90.179	Mus_spretus
ENSGAGG00000004884	XRN2	100	83.623	ENSMPUG00000001198	XRN2	93	83.009	Mustela_putorius_furo
ENSGAGG00000004884	XRN2	100	85.104	ENSMLUG00000001536	XRN2	100	84.479	Myotis_lucifugus
ENSGAGG00000004884	XRN2	100	85.208	ENSNGAG00000018138	Xrn2	100	84.583	Nannospalax_galili
ENSGAGG00000004884	XRN2	90	76.240	ENSNBRG00000008062	xrn2	97	76.240	Neolamprologus_brichardi
ENSGAGG00000004884	XRN2	100	84.792	ENSNLEG00000009991	XRN2	100	84.167	Nomascus_leucogenys
ENSGAGG00000004884	XRN2	66	95.556	ENSMEUG00000008622	-	67	95.556	Notamacropus_eugenii
ENSGAGG00000004884	XRN2	75	76.963	ENSOPRG00000001397	-	77	76.963	Ochotona_princeps
ENSGAGG00000004884	XRN2	100	85.417	ENSODEG00000010745	-	100	85.000	Octodon_degus
ENSGAGG00000004884	XRN2	98	77.268	ENSODEG00000000860	-	98	77.047	Octodon_degus
ENSGAGG00000004884	XRN2	100	71.753	ENSONIG00000018720	xrn2	100	71.546	Oreochromis_niloticus
ENSGAGG00000004884	XRN2	100	86.639	ENSOANG00000015673	XRN2	100	86.430	Ornithorhynchus_anatinus
ENSGAGG00000004884	XRN2	100	85.000	ENSOCUG00000013468	XRN2	100	84.375	Oryctolagus_cuniculus
ENSGAGG00000004884	XRN2	98	71.162	ENSORLG00000017213	xrn2	97	75.230	Oryzias_latipes
ENSGAGG00000004884	XRN2	98	71.001	ENSORLG00020001824	xrn2	99	70.795	Oryzias_latipes_hni
ENSGAGG00000004884	XRN2	98	70.864	ENSORLG00015019747	xrn2	99	70.656	Oryzias_latipes_hsok
ENSGAGG00000004884	XRN2	100	70.040	ENSOMEG00000019820	xrn2	100	70.517	Oryzias_melastigma
ENSGAGG00000004884	XRN2	100	83.646	ENSOGAG00000001068	XRN2	100	83.125	Otolemur_garnettii
ENSGAGG00000004884	XRN2	97	84.418	ENSOARG00000004443	XRN2	100	83.885	Ovis_aries
ENSGAGG00000004884	XRN2	100	84.896	ENSPPAG00000033549	XRN2	100	84.271	Pan_paniscus
ENSGAGG00000004884	XRN2	100	85.208	ENSPPRG00000008732	XRN2	100	84.583	Panthera_pardus
ENSGAGG00000004884	XRN2	97	85.027	ENSPTIG00000015683	XRN2	97	84.385	Panthera_tigris_altaica
ENSGAGG00000004884	XRN2	100	84.896	ENSPTRG00000013308	XRN2	100	84.271	Pan_troglodytes
ENSGAGG00000004884	XRN2	100	84.896	ENSPANG00000018088	XRN2	100	84.271	Papio_anubis
ENSGAGG00000004884	XRN2	100	72.551	ENSPKIG00000016889	xrn2	100	72.857	Paramormyrops_kingsleyae
ENSGAGG00000004884	XRN2	80	96.094	ENSPSIG00000014666	XRN2	100	96.094	Pelodiscus_sinensis
ENSGAGG00000004884	XRN2	100	83.854	ENSPEMG00000000111	Xrn2	100	83.229	Peromyscus_maniculatus_bairdii
ENSGAGG00000004884	XRN2	100	69.846	ENSPFOG00000004182	xrn2	97	71.610	Poecilia_formosa
ENSGAGG00000004884	XRN2	89	75.145	ENSPLAG00000007351	xrn2	96	75.145	Poecilia_latipinna
ENSGAGG00000004884	XRN2	94	68.838	ENSPMEG00000011798	xrn2	96	70.516	Poecilia_mexicana
ENSGAGG00000004884	XRN2	90	74.885	ENSPREG00000012452	xrn2	100	72.788	Poecilia_reticulata
ENSGAGG00000004884	XRN2	100	84.479	ENSPPYG00000010755	XRN2	100	83.854	Pongo_abelii
ENSGAGG00000004884	XRN2	100	80.353	ENSPCAG00000011191	XRN2	100	79.730	Procavia_capensis
ENSGAGG00000004884	XRN2	100	77.292	ENSPCOG00000016468	XRN2	100	76.042	Propithecus_coquereli
ENSGAGG00000004884	XRN2	93	75.964	ENSPVAG00000004596	XRN2	93	74.777	Pteropus_vampyrus
ENSGAGG00000004884	XRN2	90	73.908	ENSPNYG00000001765	xrn2	97	74.078	Pundamilia_nyererei
ENSGAGG00000004884	XRN2	100	71.894	ENSPNAG00000010956	xrn2	99	71.865	Pygocentrus_nattereri
ENSGAGG00000004884	XRN2	100	83.958	ENSRNOG00000011785	Xrn2	100	83.958	Rattus_norvegicus
ENSGAGG00000004884	XRN2	86	87.576	ENSRBIG00000036193	XRN2	100	87.333	Rhinopithecus_bieti
ENSGAGG00000004884	XRN2	100	84.896	ENSRROG00000044400	XRN2	90	84.271	Rhinopithecus_roxellana
ENSGAGG00000004884	XRN2	64	55.000	YOR048C	RAT1	57	55.000	Saccharomyces_cerevisiae
ENSGAGG00000004884	XRN2	100	84.896	ENSSBOG00000021014	XRN2	100	84.271	Saimiri_boliviensis_boliviensis
ENSGAGG00000004884	XRN2	100	73.231	ENSSFOG00015001091	xrn2	100	73.026	Scleropages_formosus
ENSGAGG00000004884	XRN2	89	75.349	ENSSMAG00000007834	xrn2	97	71.055	Scophthalmus_maximus
ENSGAGG00000004884	XRN2	96	69.593	ENSSDUG00000012802	xrn2	99	72.976	Seriola_dumerili
ENSGAGG00000004884	XRN2	92	74.266	ENSSLDG00000021273	xrn2	99	74.266	Seriola_lalandi_dorsalis
ENSGAGG00000004884	XRN2	77	92.000	ENSSARG00000005859	-	69	92.000	Sorex_araneus
ENSGAGG00000004884	XRN2	98	87.220	ENSSPUG00000005485	XRN2	96	87.220	Sphenodon_punctatus
ENSGAGG00000004884	XRN2	100	71.093	ENSSPAG00000016027	xrn2	99	71.181	Stegastes_partitus
ENSGAGG00000004884	XRN2	100	84.375	ENSSSCG00000007109	XRN2	100	83.750	Sus_scrofa
ENSGAGG00000004884	XRN2	100	86.785	ENSTGUG00000007535	XRN2	100	86.785	Taeniopygia_guttata
ENSGAGG00000004884	XRN2	100	68.718	ENSTRUG00000015489	xrn2	93	71.892	Takifugu_rubripes
ENSGAGG00000004884	XRN2	100	69.561	ENSTNIG00000010712	xrn2	98	70.539	Tetraodon_nigroviridis
ENSGAGG00000004884	XRN2	100	83.750	ENSTBEG00000004119	XRN2	100	83.750	Tupaia_belangeri
ENSGAGG00000004884	XRN2	93	89.048	ENSTTRG00000009087	XRN2	93	88.689	Tursiops_truncatus
ENSGAGG00000004884	XRN2	100	85.208	ENSUAMG00000024634	XRN2	100	84.583	Ursus_americanus
ENSGAGG00000004884	XRN2	97	84.813	ENSUMAG00000004012	XRN2	95	84.171	Ursus_maritimus
ENSGAGG00000004884	XRN2	89	78.480	ENSVPAG00000010694	XRN2	84	90.939	Vicugna_pacos
ENSGAGG00000004884	XRN2	100	85.417	ENSVVUG00000012178	XRN2	100	84.792	Vulpes_vulpes
ENSGAGG00000004884	XRN2	100	76.891	ENSXETG00000023501	xrn2	100	77.409	Xenopus_tropicalis
ENSGAGG00000004884	XRN2	100	69.128	ENSXMAG00000000242	xrn2	92	79.562	Xiphophorus_maculatus