EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000004918 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 3952 bases
Position: chrPPEB01003278.1:153529-157480
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000006054	MMR_HSR1	PF01926.23	4.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000007053	-	840	-	ENSGAGP00000006054	203 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000004918's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000004918's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000004918	-	100	37.931	ENSGAGG00000017207	RAB35	94	37.931
ENSGAGG00000004918	-	88	41.573	ENSGAGG00000005606	RAB2A	83	41.573
ENSGAGG00000004918	-	92	39.785	ENSGAGG00000006802	RAB1A	90	39.785
ENSGAGG00000004918	-	79	40.373	ENSGAGG00000015642	-	77	40.373
ENSGAGG00000004918	-	91	38.743	ENSGAGG00000022371	-	89	38.743
ENSGAGG00000004918	-	87	35.227	ENSGAGG00000011057	KRAS	96	35.326
ENSGAGG00000004918	-	92	40.838	ENSGAGG00000013139	RAB19	85	40.838
ENSGAGG00000004918	-	74	36.424	ENSGAGG00000017673	NRAS	83	36.478
ENSGAGG00000004918	-	78	32.500	ENSGAGG00000021838	RERG	79	32.500
ENSGAGG00000004918	-	78	43.558	ENSGAGG00000009488	RAB33A	72	43.558
ENSGAGG00000004918	-	76	38.994	ENSGAGG00000012234	RAB7A	76	38.994
ENSGAGG00000004918	-	90	40.659	ENSGAGG00000004474	RAB30	86	40.659
ENSGAGG00000004918	-	100	55.172	ENSGAGG00000008447	RAB39B	94	55.172
ENSGAGG00000004918	-	96	32.653	ENSGAGG00000025053	RRAS2	90	32.843
ENSGAGG00000004918	-	85	37.912	ENSGAGG00000012314	RAB9B	89	37.912
ENSGAGG00000004918	-	75	38.217	ENSGAGG00000017981	RAB9A	77	38.217
ENSGAGG00000004918	-	99	38.725	ENSGAGG00000021701	RAB6A	91	38.725
ENSGAGG00000004918	-	99	36.232	ENSGAGG00000012557	-	92	36.232
ENSGAGG00000004918	-	100	52.709	ENSGAGG00000004921	RAB42	97	52.709
ENSGAGG00000004918	-	76	30.769	ENSGAGG00000020094	MRAS	78	31.707
ENSGAGG00000004918	-	94	39.394	ENSGAGG00000014814	RAB11A	91	39.394
ENSGAGG00000004918	-	93	38.860	ENSGAGG00000002936	RAB33B	83	38.860
ENSGAGG00000004918	-	75	35.714	ENSGAGG00000012473	RAB34	66	35.714
ENSGAGG00000004918	-	94	35.263	ENSGAGG00000005319	RAB5A	87	35.263
ENSGAGG00000004918	-	80	40.244	ENSGAGG00000007278	RAB12	81	36.453
ENSGAGG00000004918	-	100	37.931	ENSGAGG00000004988	RAB14	93	37.931
ENSGAGG00000004918	-	79	34.969	ENSGAGG00000025340	RAB36	61	34.969
ENSGAGG00000004918	-	72	36.054	ENSGAGG00000012709	RAB23	64	36.129
ENSGAGG00000004918	-	91	36.957	ENSGAGG00000018569	RAB22A	92	36.957
ENSGAGG00000004918	-	82	42.771	ENSGAGG00000023956	RAB1B	82	42.771
ENSGAGG00000004918	-	66	34.815	ENSGAGG00000020394	RAB7B	84	34.815
ENSGAGG00000004918	-	88	39.888	ENSGAGG00000023041	RAB2B	82	39.888
ENSGAGG00000004918	-	74	36.424	ENSGAGG00000011790	-	84	36.478
ENSGAGG00000004918	-	57	31.897	ENSGAGG00000024318	ARL4D	57	31.897
ENSGAGG00000004918	-	99	33.168	ENSGAGG00000020703	RAB25	91	33.168
ENSGAGG00000004918	-	80	39.877	ENSGAGG00000020702	-	75	39.877
ENSGAGG00000004918	-	78	44.654	ENSGAGG00000000742	-	78	44.654
ENSGAGG00000004918	-	56	33.628	ENSGAGG00000016932	-	82	34.711
ENSGAGG00000004918	-	74	37.086	ENSGAGG00000019886	-	83	37.107

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000004918	-	99	58.768	ENSACIG00000016958	si:dkey-34d22.5	93	58.768	Amphilophus_citrinellus
ENSGAGG00000004918	-	99	60.096	ENSATEG00000010784	si:dkey-34d22.5	81	60.096	Anabas_testudineus
ENSGAGG00000004918	-	100	97.537	ENSCPBG00000011236	-	94	97.537	Chrysemys_picta_bellii
ENSGAGG00000004918	-	100	55.769	ENSCSEG00000019183	si:dkey-34d22.5	94	55.769	Cynoglossus_semilaevis
ENSGAGG00000004918	-	99	58.454	ENSCVAG00000017064	si:dkey-34d22.5	93	58.454	Cyprinodon_variegatus
ENSGAGG00000004918	-	87	42.614	ENSDARG00000100379	si:dkey-34d22.2	95	42.614	Danio_rerio
ENSGAGG00000004918	-	100	71.921	ENSFALG00000001373	-	94	71.921	Ficedula_albicollis
ENSGAGG00000004918	-	99	58.173	ENSFHEG00000012041	si:dkey-34d22.5	93	58.173	Fundulus_heteroclitus
ENSGAGG00000004918	-	100	70.098	ENSGALG00000000994	-	94	70.098	Gallus_gallus
ENSGAGG00000004918	-	100	57.212	ENSGAFG00000008183	si:dkey-34d22.5	94	57.212	Gambusia_affinis
ENSGAGG00000004918	-	99	59.113	ENSHCOG00000015692	si:dkey-34d22.5	94	59.113	Hippocampus_comes
ENSGAGG00000004918	-	99	59.716	ENSKMAG00000012778	si:dkey-34d22.5	93	59.716	Kryptolebias_marmoratus
ENSGAGG00000004918	-	99	58.654	ENSLBEG00000002926	si:dkey-34d22.5	94	58.654	Labrus_bergylta
ENSGAGG00000004918	-	100	58.128	ENSLACG00000012674	si:dkey-34d22.5	94	58.128	Latimeria_chalumnae
ENSGAGG00000004918	-	100	63.054	ENSLOCG00000003467	si:dkey-34d22.5	94	63.054	Lepisosteus_oculatus
ENSGAGG00000004918	-	100	59.512	ENSMMOG00000006846	si:dkey-34d22.5	93	59.512	Mola_mola
ENSGAGG00000004918	-	99	58.654	ENSMALG00000013152	si:dkey-34d22.5	94	58.654	Monopterus_albus
ENSGAGG00000004918	-	99	59.024	ENSORLG00000014099	si:dkey-34d22.5	94	59.024	Oryzias_latipes
ENSGAGG00000004918	-	99	58.537	ENSORLG00020020277	si:dkey-34d22.5	94	58.537	Oryzias_latipes_hni
ENSGAGG00000004918	-	99	59.024	ENSORLG00015000142	si:dkey-34d22.5	94	59.024	Oryzias_latipes_hsok
ENSGAGG00000004918	-	90	64.130	ENSOMEG00000017958	si:dkey-34d22.5	94	58.937	Oryzias_melastigma
ENSGAGG00000004918	-	100	57.820	ENSPKIG00000021209	si:dkey-34d22.5	94	57.820	Paramormyrops_kingsleyae
ENSGAGG00000004918	-	93	91.489	ENSPSIG00000006606	-	94	91.489	Pelodiscus_sinensis
ENSGAGG00000004918	-	90	65.761	ENSPMGG00000001298	-	94	60.386	Periophthalmus_magnuspinnatus
ENSGAGG00000004918	-	100	66.176	ENSPCIG00000022399	-	91	66.176	Phascolarctos_cinereus
ENSGAGG00000004918	-	100	57.212	ENSPFOG00000014499	si:dkey-34d22.5	94	57.212	Poecilia_formosa
ENSGAGG00000004918	-	100	57.212	ENSPLAG00000007773	si:dkey-34d22.5	94	57.212	Poecilia_latipinna
ENSGAGG00000004918	-	100	57.212	ENSPMEG00000012932	si:dkey-34d22.5	94	57.212	Poecilia_mexicana
ENSGAGG00000004918	-	100	63.054	ENSSHAG00000008520	-	91	63.054	Sarcophilus_harrisii
ENSGAGG00000004918	-	100	59.709	ENSSFOG00015012088	rab42	92	59.709	Scleropages_formosus
ENSGAGG00000004918	-	100	59.615	ENSSLDG00000002646	si:dkey-34d22.5	94	59.615	Seriola_lalandi_dorsalis
ENSGAGG00000004918	-	99	59.903	ENSSPAG00000012955	si:dkey-34d22.5	93	59.903	Stegastes_partitus
ENSGAGG00000004918	-	87	51.977	ENSXETG00000020622	rab39a	86	51.977	Xenopus_tropicalis
ENSGAGG00000004918	-	100	58.173	ENSXCOG00000008410	si:dkey-34d22.5	94	58.173	Xiphophorus_couchianus
ENSGAGG00000004918	-	100	58.173	ENSXMAG00000029317	si:dkey-34d22.5	94	58.173	Xiphophorus_maculatus