EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000004940 (Gene tree)
Gene ID: -
Gene Symbol: TRNAU1AP
Alias: FLJ20503|SECP43|TRSPAP1
Full Name: tRNA selenocysteine 1 associated protein 1
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 12519 bases
Position: chrPPEB01003278.1:185602-198120
Accession: 30813
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000006081	RRM_1	PF00076.22	1.2e-24	1	2
ENSGAGP00000006081	RRM_1	PF00076.22	1.2e-24	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000007087	TRNAU1AP-201	1376	-	ENSGAGP00000006081	274 (aa)	-	UPI00042BDC1B

Gene Model

Click here to download ENSGAGG00000004940's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000004940's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000004940	TRNAU1AP	71	48.585	ENSGAGG00000022384	-	79	49.057

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000004940	TRNAU1AP	100	95.255	ENSG00000180098	TRNAU1AP	95	95.255	Homo_sapiens
ENSGAGG00000004940	TRNAU1AP	99	58.644	ENSAPOG00000007148	TRNAU1AP	98	56.610	Acanthochromis_polyacanthus
ENSGAGG00000004940	TRNAU1AP	100	94.161	ENSAMEG00000011367	TRNAU1AP	95	94.161	Ailuropoda_melanoleuca
ENSGAGG00000004940	TRNAU1AP	92	69.737	ENSACIG00000004161	trnau1apa	94	59.441	Amphilophus_citrinellus
ENSGAGG00000004940	TRNAU1AP	99	57.770	ENSAOCG00000008056	trnau1apa	94	58.362	Amphiprion_ocellaris
ENSGAGG00000004940	TRNAU1AP	99	57.770	ENSAPEG00000008868	trnau1apa	94	58.362	Amphiprion_percula
ENSGAGG00000004940	TRNAU1AP	99	57.191	ENSATEG00000012140	trnau1apa	95	55.518	Anabas_testudineus
ENSGAGG00000004940	TRNAU1AP	96	96.183	ENSAPLG00000002606	TRNAU1AP	96	96.183	Anas_platyrhynchos
ENSGAGG00000004940	TRNAU1AP	70	51.042	ENSACAG00000004205	-	73	51.042	Anolis_carolinensis
ENSGAGG00000004940	TRNAU1AP	99	79.927	ENSACAG00000003995	-	95	79.927	Anolis_carolinensis
ENSGAGG00000004940	TRNAU1AP	100	95.255	ENSANAG00000018976	TRNAU1AP	95	95.255	Aotus_nancymaae
ENSGAGG00000004940	TRNAU1AP	99	60.345	ENSACLG00000018515	trnau1apa	94	57.931	Astatotilapia_calliptera
ENSGAGG00000004940	TRNAU1AP	96	57.407	ENSAMXG00000013750	trnau1apa	87	56.929	Astyanax_mexicanus
ENSGAGG00000004940	TRNAU1AP	96	67.089	ENSAMXG00000029240	-	97	67.089	Astyanax_mexicanus
ENSGAGG00000004940	TRNAU1AP	100	94.891	ENSBTAG00000010393	TRNAU1AP	95	94.891	Bos_taurus
ENSGAGG00000004940	TRNAU1AP	100	95.255	ENSCJAG00000009717	TRNAU1AP	95	95.255	Callithrix_jacchus
ENSGAGG00000004940	TRNAU1AP	100	94.891	ENSCAFG00000011735	TRNAU1AP	95	94.891	Canis_familiaris
ENSGAGG00000004940	TRNAU1AP	100	94.891	ENSCAFG00020023584	TRNAU1AP	95	94.891	Canis_lupus_dingo
ENSGAGG00000004940	TRNAU1AP	100	94.891	ENSCHIG00000023215	TRNAU1AP	95	94.891	Capra_hircus
ENSGAGG00000004940	TRNAU1AP	100	94.891	ENSTSYG00000003506	TRNAU1AP	95	94.891	Carlito_syrichta
ENSGAGG00000004940	TRNAU1AP	100	94.526	ENSCPOG00000001925	TRNAU1AP	95	94.526	Cavia_porcellus
ENSGAGG00000004940	TRNAU1AP	100	95.255	ENSCCAG00000037506	TRNAU1AP	95	95.255	Cebus_capucinus
ENSGAGG00000004940	TRNAU1AP	100	94.891	ENSCATG00000044617	TRNAU1AP	95	94.891	Cercocebus_atys
ENSGAGG00000004940	TRNAU1AP	100	93.796	ENSCLAG00000008223	TRNAU1AP	95	93.796	Chinchilla_lanigera
ENSGAGG00000004940	TRNAU1AP	100	94.891	ENSCSAG00000001014	TRNAU1AP	95	94.891	Chlorocebus_sabaeus
ENSGAGG00000004940	TRNAU1AP	100	99.635	ENSCPBG00000000121	TRNAU1AP	100	99.635	Chrysemys_picta_bellii
ENSGAGG00000004940	TRNAU1AP	60	52.121	ENSCSAVG00000011781	-	87	52.121	Ciona_savignyi
ENSGAGG00000004940	TRNAU1AP	100	82.847	ENSCANG00000041949	TRNAU1AP	100	94.915	Colobus_angolensis_palliatus
ENSGAGG00000004940	TRNAU1AP	100	95.255	ENSCGRG00001004713	Trnau1ap	95	95.255	Cricetulus_griseus_chok1gshd
ENSGAGG00000004940	TRNAU1AP	100	95.255	ENSCGRG00000014532	Trnau1ap	95	95.255	Cricetulus_griseus_crigri
ENSGAGG00000004940	TRNAU1AP	98	56.401	ENSCSEG00000006663	trnau1apa	92	56.747	Cynoglossus_semilaevis
ENSGAGG00000004940	TRNAU1AP	96	59.489	ENSCVAG00000018069	trnau1apa	94	58.242	Cyprinodon_variegatus
ENSGAGG00000004940	TRNAU1AP	96	51.852	ENSDARG00000101323	trnau1apa	85	48.708	Danio_rerio
ENSGAGG00000004940	TRNAU1AP	66	77.222	ENSDNOG00000047959	-	87	81.548	Dasypus_novemcinctus
ENSGAGG00000004940	TRNAU1AP	100	94.891	ENSDNOG00000033009	TRNAU1AP	95	94.891	Dasypus_novemcinctus
ENSGAGG00000004940	TRNAU1AP	100	89.781	ENSDORG00000006349	Trnau1ap	94	95.872	Dipodomys_ordii
ENSGAGG00000004940	TRNAU1AP	89	91.020	ENSETEG00000012594	TRNAU1AP	100	91.020	Echinops_telfairi
ENSGAGG00000004940	TRNAU1AP	71	57.500	ENSEBUG00000006349	-	60	57.500	Eptatretus_burgeri
ENSGAGG00000004940	TRNAU1AP	100	95.255	ENSEASG00005010062	TRNAU1AP	95	95.255	Equus_asinus_asinus
ENSGAGG00000004940	TRNAU1AP	100	95.255	ENSECAG00000012980	TRNAU1AP	95	95.255	Equus_caballus
ENSGAGG00000004940	TRNAU1AP	97	61.649	ENSELUG00000017686	trnau1apa	94	60.870	Esox_lucius
ENSGAGG00000004940	TRNAU1AP	96	70.238	ENSELUG00000022790	-	94	50.370	Esox_lucius
ENSGAGG00000004940	TRNAU1AP	100	95.255	ENSFCAG00000013401	TRNAU1AP	95	95.255	Felis_catus
ENSGAGG00000004940	TRNAU1AP	100	96.350	ENSFALG00000001371	TRNAU1AP	100	96.350	Ficedula_albicollis
ENSGAGG00000004940	TRNAU1AP	100	94.161	ENSFDAG00000018599	TRNAU1AP	95	94.161	Fukomys_damarensis
ENSGAGG00000004940	TRNAU1AP	79	59.916	ENSFHEG00000018232	trnau1apa	86	56.574	Fundulus_heteroclitus
ENSGAGG00000004940	TRNAU1AP	96	55.109	ENSGMOG00000016508	trnau1apa	89	54.779	Gadus_morhua
ENSGAGG00000004940	TRNAU1AP	71	43.396	ENSGALG00000012721	C2H6orf52	95	44.402	Gallus_gallus
ENSGAGG00000004940	TRNAU1AP	100	95.620	ENSGALG00000001310	-	95	95.620	Gallus_gallus
ENSGAGG00000004940	TRNAU1AP	78	57.826	ENSGAFG00000004928	trnau1apa	91	55.417	Gambusia_affinis
ENSGAGG00000004940	TRNAU1AP	98	58.571	ENSGACG00000001443	trnau1apa	92	58.007	Gasterosteus_aculeatus
ENSGAGG00000004940	TRNAU1AP	100	95.255	ENSGGOG00000003511	TRNAU1AP	95	95.255	Gorilla_gorilla
ENSGAGG00000004940	TRNAU1AP	99	59.322	ENSHBUG00000002510	trnau1apa	94	56.949	Haplochromis_burtoni
ENSGAGG00000004940	TRNAU1AP	100	93.796	ENSHGLG00000010380	TRNAU1AP	95	93.796	Heterocephalus_glaber_female
ENSGAGG00000004940	TRNAU1AP	99	93.727	ENSHGLG00100012699	TRNAU1AP	95	94.074	Heterocephalus_glaber_male
ENSGAGG00000004940	TRNAU1AP	100	56.552	ENSHCOG00000014770	trnau1apa	94	55.517	Hippocampus_comes
ENSGAGG00000004940	TRNAU1AP	100	95.255	ENSSTOG00000000079	TRNAU1AP	95	95.255	Ictidomys_tridecemlineatus
ENSGAGG00000004940	TRNAU1AP	100	95.620	ENSJJAG00000010128	Trnau1ap	95	95.620	Jaculus_jaculus
ENSGAGG00000004940	TRNAU1AP	96	60.000	ENSKMAG00000001230	trnau1apa	90	57.401	Kryptolebias_marmoratus
ENSGAGG00000004940	TRNAU1AP	96	60.284	ENSLBEG00000011683	trnau1apa	90	59.364	Labrus_bergylta
ENSGAGG00000004940	TRNAU1AP	100	72.628	ENSLACG00000005541	TRNAU1AP	95	72.628	Latimeria_chalumnae
ENSGAGG00000004940	TRNAU1AP	99	72.727	ENSLOCG00000004041	trnau1apa	95	71.168	Lepisosteus_oculatus
ENSGAGG00000004940	TRNAU1AP	100	95.255	ENSLAFG00000007628	TRNAU1AP	95	95.255	Loxodonta_africana
ENSGAGG00000004940	TRNAU1AP	100	94.891	ENSMFAG00000043751	TRNAU1AP	95	94.891	Macaca_fascicularis
ENSGAGG00000004940	TRNAU1AP	100	94.891	ENSMMUG00000006561	TRNAU1AP	95	94.891	Macaca_mulatta
ENSGAGG00000004940	TRNAU1AP	100	94.891	ENSMNEG00000044201	TRNAU1AP	95	94.891	Macaca_nemestrina
ENSGAGG00000004940	TRNAU1AP	100	94.891	ENSMLEG00000015649	TRNAU1AP	95	94.891	Mandrillus_leucophaeus
ENSGAGG00000004940	TRNAU1AP	99	58.099	ENSMAMG00000001247	trnau1apa	94	58.484	Mastacembelus_armatus
ENSGAGG00000004940	TRNAU1AP	99	60.345	ENSMZEG00005017722	trnau1apa	94	57.931	Maylandia_zebra
ENSGAGG00000004940	TRNAU1AP	100	94.161	ENSMGAG00000002105	TRNAU1AP	99	94.161	Meleagris_gallopavo
ENSGAGG00000004940	TRNAU1AP	100	94.891	ENSMICG00000008386	TRNAU1AP	100	94.350	Microcebus_murinus
ENSGAGG00000004940	TRNAU1AP	100	94.891	ENSMOCG00000011189	Trnau1ap	95	94.891	Microtus_ochrogaster
ENSGAGG00000004940	TRNAU1AP	95	57.854	ENSMMOG00000012107	trnau1apa	88	57.854	Mola_mola
ENSGAGG00000004940	TRNAU1AP	100	91.971	ENSMODG00000010927	TRNAU1AP	95	91.971	Monodelphis_domestica
ENSGAGG00000004940	TRNAU1AP	96	57.651	ENSMALG00000016778	trnau1apa	90	57.651	Monopterus_albus
ENSGAGG00000004940	TRNAU1AP	100	94.161	MGP_CAROLIEiJ_G0026563	Trnau1ap	98	94.937	Mus_caroli
ENSGAGG00000004940	TRNAU1AP	100	94.161	ENSMUSG00000028898	Trnau1ap	98	94.937	Mus_musculus
ENSGAGG00000004940	TRNAU1AP	100	94.526	MGP_PahariEiJ_G0028896	Trnau1ap	98	94.937	Mus_pahari
ENSGAGG00000004940	TRNAU1AP	100	93.796	MGP_SPRETEiJ_G0027544	Trnau1ap	98	94.937	Mus_spretus
ENSGAGG00000004940	TRNAU1AP	100	94.891	ENSMPUG00000015511	TRNAU1AP	95	94.891	Mustela_putorius_furo
ENSGAGG00000004940	TRNAU1AP	100	94.891	ENSMLUG00000012586	TRNAU1AP	95	94.891	Myotis_lucifugus
ENSGAGG00000004940	TRNAU1AP	100	94.161	ENSNGAG00000015881	Trnau1ap	95	94.161	Nannospalax_galili
ENSGAGG00000004940	TRNAU1AP	99	56.786	ENSNBRG00000001758	trnau1apa	94	56.429	Neolamprologus_brichardi
ENSGAGG00000004940	TRNAU1AP	100	95.255	ENSNLEG00000009822	TRNAU1AP	95	95.255	Nomascus_leucogenys
ENSGAGG00000004940	TRNAU1AP	100	90.876	ENSMEUG00000006117	TRNAU1AP	99	90.876	Notamacropus_eugenii
ENSGAGG00000004940	TRNAU1AP	69	90.000	ENSOPRG00000007084	-	65	90.000	Ochotona_princeps
ENSGAGG00000004940	TRNAU1AP	100	94.161	ENSODEG00000002970	TRNAU1AP	95	94.161	Octodon_degus
ENSGAGG00000004940	TRNAU1AP	82	59.504	ENSONIG00000004715	trnau1apa	94	60.166	Oreochromis_niloticus
ENSGAGG00000004940	TRNAU1AP	100	73.188	ENSOANG00000005325	-	95	73.188	Ornithorhynchus_anatinus
ENSGAGG00000004940	TRNAU1AP	100	93.796	ENSOCUG00000011704	-	95	93.796	Oryctolagus_cuniculus
ENSGAGG00000004940	TRNAU1AP	88	75.417	ENSOCUG00000006834	-	94	72.500	Oryctolagus_cuniculus
ENSGAGG00000004940	TRNAU1AP	100	74.182	ENSOCUG00000002353	-	95	74.182	Oryctolagus_cuniculus
ENSGAGG00000004940	TRNAU1AP	98	58.303	ENSORLG00000010428	trnau1apa	92	56.584	Oryzias_latipes
ENSGAGG00000004940	TRNAU1AP	98	57.651	ENSORLG00020000926	trnau1ap	92	56.584	Oryzias_latipes_hni
ENSGAGG00000004940	TRNAU1AP	98	57.651	ENSORLG00015009858	trnau1ap	92	56.584	Oryzias_latipes_hsok
ENSGAGG00000004940	TRNAU1AP	98	58.596	ENSOMEG00000007873	trnau1apa	92	54.930	Oryzias_melastigma
ENSGAGG00000004940	TRNAU1AP	100	94.891	ENSOGAG00000002274	TRNAU1AP	95	94.891	Otolemur_garnettii
ENSGAGG00000004940	TRNAU1AP	100	94.891	ENSOARG00000002843	TRNAU1AP	95	94.891	Ovis_aries
ENSGAGG00000004940	TRNAU1AP	100	95.255	ENSPPAG00000033927	TRNAU1AP	95	95.255	Pan_paniscus
ENSGAGG00000004940	TRNAU1AP	100	95.255	ENSPPRG00000004416	TRNAU1AP	95	95.255	Panthera_pardus
ENSGAGG00000004940	TRNAU1AP	100	95.255	ENSPTIG00000016677	TRNAU1AP	95	95.255	Panthera_tigris_altaica
ENSGAGG00000004940	TRNAU1AP	98	78.598	ENSPTRG00000000434	-	97	77.860	Pan_troglodytes
ENSGAGG00000004940	TRNAU1AP	100	94.891	ENSPANG00000016019	TRNAU1AP	95	94.891	Papio_anubis
ENSGAGG00000004940	TRNAU1AP	95	57.721	ENSPKIG00000015511	trnau1apa	89	54.412	Paramormyrops_kingsleyae
ENSGAGG00000004940	TRNAU1AP	95	74.699	ENSPKIG00000022205	-	92	78.205	Paramormyrops_kingsleyae
ENSGAGG00000004940	TRNAU1AP	100	98.540	ENSPSIG00000006864	TRNAU1AP	100	98.540	Pelodiscus_sinensis
ENSGAGG00000004940	TRNAU1AP	96	59.925	ENSPMGG00000023893	trnau1apa	89	58.113	Periophthalmus_magnuspinnatus
ENSGAGG00000004940	TRNAU1AP	100	94.891	ENSPEMG00000007877	Trnau1ap	95	94.891	Peromyscus_maniculatus_bairdii
ENSGAGG00000004940	TRNAU1AP	77	61.792	ENSPMAG00000005934	trnau1apa	94	58.962	Petromyzon_marinus
ENSGAGG00000004940	TRNAU1AP	59	61.446	ENSPMAG00000000592	trnau1apa	91	61.446	Petromyzon_marinus
ENSGAGG00000004940	TRNAU1AP	96	56.429	ENSPFOG00000008100	trnau1apa	90	55.596	Poecilia_formosa
ENSGAGG00000004940	TRNAU1AP	96	56.429	ENSPLAG00000010236	trnau1apa	93	55.596	Poecilia_latipinna
ENSGAGG00000004940	TRNAU1AP	96	58.175	ENSPMEG00000016387	trnau1apa	87	57.795	Poecilia_mexicana
ENSGAGG00000004940	TRNAU1AP	96	54.580	ENSPREG00000019821	trnau1apa	82	65.789	Poecilia_reticulata
ENSGAGG00000004940	TRNAU1AP	93	82.946	ENSPPYG00000001639	-	100	82.946	Pongo_abelii
ENSGAGG00000004940	TRNAU1AP	100	94.891	ENSPCOG00000027712	-	100	94.350	Propithecus_coquereli
ENSGAGG00000004940	TRNAU1AP	99	78.022	ENSPCOG00000023470	-	97	78.022	Propithecus_coquereli
ENSGAGG00000004940	TRNAU1AP	100	95.255	ENSPVAG00000017214	TRNAU1AP	95	95.255	Pteropus_vampyrus
ENSGAGG00000004940	TRNAU1AP	99	59.322	ENSPNYG00000010130	trnau1apa	97	64.516	Pundamilia_nyererei
ENSGAGG00000004940	TRNAU1AP	100	52.265	ENSPNAG00000024905	trnau1apa	92	49.310	Pygocentrus_nattereri
ENSGAGG00000004940	TRNAU1AP	94	86.822	ENSRNOG00000055344	Trnau1ap	81	92.437	Rattus_norvegicus
ENSGAGG00000004940	TRNAU1AP	100	95.255	ENSRBIG00000029083	TRNAU1AP	95	95.255	Rhinopithecus_bieti
ENSGAGG00000004940	TRNAU1AP	100	95.255	ENSRROG00000029128	TRNAU1AP	95	95.255	Rhinopithecus_roxellana
ENSGAGG00000004940	TRNAU1AP	100	95.255	ENSSBOG00000021299	TRNAU1AP	95	95.255	Saimiri_boliviensis_boliviensis
ENSGAGG00000004940	TRNAU1AP	100	91.241	ENSSHAG00000008108	TRNAU1AP	95	91.241	Sarcophilus_harrisii
ENSGAGG00000004940	TRNAU1AP	99	54.545	ENSSMAG00000020851	trnau1apa	95	56.463	Scophthalmus_maximus
ENSGAGG00000004940	TRNAU1AP	96	58.304	ENSSDUG00000011734	trnau1apa	90	55.944	Seriola_dumerili
ENSGAGG00000004940	TRNAU1AP	96	69.841	ENSSLDG00000012101	trnau1apa	88	49.627	Seriola_lalandi_dorsalis
ENSGAGG00000004940	TRNAU1AP	100	93.796	ENSSARG00000007536	TRNAU1AP	99	93.796	Sorex_araneus
ENSGAGG00000004940	TRNAU1AP	64	85.795	ENSSPUG00000010415	-	100	85.795	Sphenodon_punctatus
ENSGAGG00000004940	TRNAU1AP	99	88.278	ENSSPUG00000010400	-	95	88.278	Sphenodon_punctatus
ENSGAGG00000004940	TRNAU1AP	99	57.823	ENSSPAG00000005029	trnau1apa	94	57.823	Stegastes_partitus
ENSGAGG00000004940	TRNAU1AP	100	95.255	ENSSSCG00000030284	TRNAU1AP	100	94.915	Sus_scrofa
ENSGAGG00000004940	TRNAU1AP	71	52.041	ENSTGUG00000005908	-	100	52.041	Taeniopygia_guttata
ENSGAGG00000004940	TRNAU1AP	100	95.985	ENSTGUG00000000735	-	99	95.985	Taeniopygia_guttata
ENSGAGG00000004940	TRNAU1AP	99	57.241	ENSTRUG00000003352	trnau1apa	94	56.552	Takifugu_rubripes
ENSGAGG00000004940	TRNAU1AP	100	55.254	ENSTNIG00000006129	trnau1apa	95	54.915	Tetraodon_nigroviridis
ENSGAGG00000004940	TRNAU1AP	89	84.898	ENSTBEG00000008049	-	100	84.898	Tupaia_belangeri
ENSGAGG00000004940	TRNAU1AP	100	94.891	ENSTTRG00000001854	TRNAU1AP	95	94.891	Tursiops_truncatus
ENSGAGG00000004940	TRNAU1AP	100	94.891	ENSUAMG00000008789	TRNAU1AP	100	94.891	Ursus_americanus
ENSGAGG00000004940	TRNAU1AP	100	94.891	ENSUMAG00000011068	TRNAU1AP	100	94.350	Ursus_maritimus
ENSGAGG00000004940	TRNAU1AP	89	95.918	ENSVPAG00000006778	TRNAU1AP	84	95.918	Vicugna_pacos
ENSGAGG00000004940	TRNAU1AP	100	94.891	ENSVVUG00000012518	TRNAU1AP	89	94.891	Vulpes_vulpes
ENSGAGG00000004940	TRNAU1AP	96	55.714	ENSXMAG00000017361	trnau1apa	90	55.957	Xiphophorus_maculatus