EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000005014 (Gene tree)
Gene ID: -
Gene Symbol: ATXN2
Alias: ATX2|SCA2|TNRC13
Full Name: ataxin 2
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 66287 bases
Position: chrPPEB01000374.1:393060-459346
Accession: 10555
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000006240	PAM2	PF07145.15	2.1e-06	1	1
ENSGAGP00000006230	PAM2	PF07145.15	2.1e-06	1	1
ENSGAGP00000006236	PAM2	PF07145.15	2.1e-06	1	1
ENSGAGP00000006240	LsmAD	PF06741.13	1e-15	1	1
ENSGAGP00000006236	LsmAD	PF06741.13	1.1e-15	1	1
ENSGAGP00000006230	LsmAD	PF06741.13	1.1e-15	1	1
ENSGAGP00000006240	SM-ATX	PF14438.6	1.3e-21	1	1
ENSGAGP00000006230	SM-ATX	PF14438.6	1.3e-21	1	1
ENSGAGP00000006236	SM-ATX	PF14438.6	1.3e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000007243	ATXN2-201	3619	-	ENSGAGP00000006230	984 (aa)	-	-
ENSGAGT00000007253	ATXN2-203	3565	-	ENSGAGP00000006240	966 (aa)	-	-
ENSGAGT00000007249	ATXN2-202	3604	-	ENSGAGP00000006236	979 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000005014's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000005014's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000005014	ATXN2	99	43.243	ENSGAGG00000006078	ATXN2L	93	43.569

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000005014	ATXN2	100	76.072	ENSG00000204842	ATXN2	92	100.000	Homo_sapiens
ENSGAGG00000005014	ATXN2	100	60.195	ENSAPOG00000014663	atxn2	95	61.417	Acanthochromis_polyacanthus
ENSGAGG00000005014	ATXN2	99	60.917	ENSAOCG00000001107	atxn2	95	61.417	Amphiprion_ocellaris
ENSGAGG00000005014	ATXN2	100	60.451	ENSAPEG00000020250	atxn2	95	60.959	Amphiprion_percula
ENSGAGG00000005014	ATXN2	100	74.547	ENSANAG00000022522	ATXN2	100	74.581	Aotus_nancymaae
ENSGAGG00000005014	ATXN2	99	61.648	ENSAMXG00000002342	atxn2	95	61.222	Astyanax_mexicanus
ENSGAGG00000005014	ATXN2	100	77.026	ENSBTAG00000022069	ATXN2	100	75.596	Bos_taurus
ENSGAGG00000005014	ATXN2	100	72.812	ENSCJAG00000011756	ATXN2	100	72.297	Callithrix_jacchus
ENSGAGG00000005014	ATXN2	100	72.692	ENSCAFG00000008606	ATXN2	79	76.020	Canis_familiaris
ENSGAGG00000005014	ATXN2	100	71.185	ENSCHIG00000012141	ATXN2	81	75.167	Capra_hircus
ENSGAGG00000005014	ATXN2	100	76.454	ENSTSYG00000002717	ATXN2	100	75.304	Carlito_syrichta
ENSGAGG00000005014	ATXN2	68	84.569	ENSCAPG00000013332	ATXN2	100	83.056	Cavia_aperea
ENSGAGG00000005014	ATXN2	65	85.669	ENSCPOG00000001390	ATXN2	96	71.053	Cavia_porcellus
ENSGAGG00000005014	ATXN2	100	79.617	ENSCCAG00000026267	ATXN2	100	73.953	Cebus_capucinus
ENSGAGG00000005014	ATXN2	99	80.178	ENSCATG00000017877	ATXN2	100	72.394	Cercocebus_atys
ENSGAGG00000005014	ATXN2	100	74.405	ENSCLAG00000009324	ATXN2	96	74.691	Chinchilla_lanigera
ENSGAGG00000005014	ATXN2	100	75.833	ENSCSAG00000002590	ATXN2	91	74.881	Chlorocebus_sabaeus
ENSGAGG00000005014	ATXN2	80	78.199	ENSCHOG00000004284	ATXN2	78	78.199	Choloepus_hoffmanni
ENSGAGG00000005014	ATXN2	100	98.479	ENSCPBG00000003465	ATXN2	100	98.479	Chrysemys_picta_bellii
ENSGAGG00000005014	ATXN2	100	75.691	ENSCANG00000042302	ATXN2	100	74.025	Colobus_angolensis_palliatus
ENSGAGG00000005014	ATXN2	72	85.654	ENSCGRG00001022603	Atxn2	82	71.115	Cricetulus_griseus_chok1gshd
ENSGAGG00000005014	ATXN2	72	85.654	ENSCGRG00000015823	Atxn2	96	73.479	Cricetulus_griseus_crigri
ENSGAGG00000005014	ATXN2	100	58.457	ENSCSEG00000009072	-	96	57.758	Cynoglossus_semilaevis
ENSGAGG00000005014	ATXN2	100	58.301	ENSCSEG00000018366	atxn2	95	57.998	Cynoglossus_semilaevis
ENSGAGG00000005014	ATXN2	100	58.934	ENSCVAG00000020160	atxn2	88	69.424	Cyprinodon_variegatus
ENSGAGG00000005014	ATXN2	100	53.142	ENSDARG00000052897	atxn2	95	54.537	Danio_rerio
ENSGAGG00000005014	ATXN2	100	73.644	ENSDNOG00000015696	ATXN2	100	73.326	Dasypus_novemcinctus
ENSGAGG00000005014	ATXN2	99	68.283	ENSDORG00000000808	Atxn2	98	69.084	Dipodomys_ordii
ENSGAGG00000005014	ATXN2	94	90.873	ENSETEG00000005224	ATXN2	75	90.873	Echinops_telfairi
ENSGAGG00000005014	ATXN2	100	86.880	ENSEASG00005012077	ATXN2	98	87.397	Equus_asinus_asinus
ENSGAGG00000005014	ATXN2	78	86.972	ENSEEUG00000014635	-	71	86.972	Erinaceus_europaeus
ENSGAGG00000005014	ATXN2	99	58.764	ENSELUG00000019632	atxn2	94	58.443	Esox_lucius
ENSGAGG00000005014	ATXN2	100	75.882	ENSFALG00000009001	ATXN2	100	77.628	Ficedula_albicollis
ENSGAGG00000005014	ATXN2	100	71.157	ENSFDAG00000020942	ATXN2	98	71.727	Fukomys_damarensis
ENSGAGG00000005014	ATXN2	93	59.577	ENSFHEG00000019561	atxn2	92	59.302	Fundulus_heteroclitus
ENSGAGG00000005014	ATXN2	70	73.239	ENSGMOG00000007412	atxn2	92	59.705	Gadus_morhua
ENSGAGG00000005014	ATXN2	99	77.885	ENSGALG00000004625	ATXN2	98	76.718	Gallus_gallus
ENSGAGG00000005014	ATXN2	99	60.201	ENSGAFG00000003302	atxn2	94	59.226	Gambusia_affinis
ENSGAGG00000005014	ATXN2	100	73.239	ENSGACG00000006295	atxn2	94	73.239	Gasterosteus_aculeatus
ENSGAGG00000005014	ATXN2	100	75.452	ENSGGOG00000002137	ATXN2	100	74.881	Gorilla_gorilla
ENSGAGG00000005014	ATXN2	99	60.757	ENSHBUG00000002921	atxn2	96	59.684	Haplochromis_burtoni
ENSGAGG00000005014	ATXN2	100	73.561	ENSHGLG00000009812	ATXN2	82	73.854	Heterocephalus_glaber_female
ENSGAGG00000005014	ATXN2	100	74.310	ENSHGLG00100019351	ATXN2	98	74.691	Heterocephalus_glaber_male
ENSGAGG00000005014	ATXN2	99	57.962	ENSHCOG00000005278	atxn2	92	57.765	Hippocampus_comes
ENSGAGG00000005014	ATXN2	100	58.882	ENSIPUG00000016649	atxn2	94	58.859	Ictalurus_punctatus
ENSGAGG00000005014	ATXN2	100	74.596	ENSSTOG00000000978	ATXN2	100	87.092	Ictidomys_tridecemlineatus
ENSGAGG00000005014	ATXN2	100	61.249	ENSKMAG00000000980	atxn2	95	61.150	Kryptolebias_marmoratus
ENSGAGG00000005014	ATXN2	60	55.116	ENSLBEG00000017484	atxn2	95	54.739	Labrus_bergylta
ENSGAGG00000005014	ATXN2	99	70.487	ENSLOCG00000007880	atxn2	94	70.183	Lepisosteus_oculatus
ENSGAGG00000005014	ATXN2	100	70.809	ENSLAFG00000007416	ATXN2	100	86.898	Loxodonta_africana
ENSGAGG00000005014	ATXN2	100	75.405	ENSMFAG00000000374	ATXN2	100	73.209	Macaca_fascicularis
ENSGAGG00000005014	ATXN2	100	75.833	ENSMMUG00000002226	ATXN2	100	74.953	Macaca_mulatta
ENSGAGG00000005014	ATXN2	100	75.405	ENSMNEG00000035588	ATXN2	100	73.209	Macaca_nemestrina
ENSGAGG00000005014	ATXN2	100	75.786	ENSMLEG00000024324	ATXN2	100	73.209	Mandrillus_leucophaeus
ENSGAGG00000005014	ATXN2	99	60.260	ENSMAMG00000019160	atxn2	93	60.961	Mastacembelus_armatus
ENSGAGG00000005014	ATXN2	99	60.757	ENSMZEG00005008476	atxn2	95	60.374	Maylandia_zebra
ENSGAGG00000005014	ATXN2	100	80.700	ENSMGAG00000005288	ATXN2	98	78.897	Meleagris_gallopavo
ENSGAGG00000005014	ATXN2	68	86.082	ENSMAUG00000008223	-	100	84.569	Mesocricetus_auratus
ENSGAGG00000005014	ATXN2	100	76.118	ENSMICG00000013541	ATXN2	100	88.696	Microcebus_murinus
ENSGAGG00000005014	ATXN2	86	69.147	ENSMOCG00000005219	Atxn2	100	83.510	Microtus_ochrogaster
ENSGAGG00000005014	ATXN2	100	72.887	ENSMMOG00000013189	atxn2	90	71.831	Mola_mola
ENSGAGG00000005014	ATXN2	99	60.682	ENSMALG00000018529	atxn2	94	60.080	Monopterus_albus
ENSGAGG00000005014	ATXN2	100	74.573	MGP_CAROLIEiJ_G0027692	Atxn2	100	80.851	Mus_caroli
ENSGAGG00000005014	ATXN2	100	85.253	ENSMUSG00000042605	Atxn2	100	86.707	Mus_musculus
ENSGAGG00000005014	ATXN2	89	85.443	MGP_PahariEiJ_G0024272	Atxn2	100	86.103	Mus_pahari
ENSGAGG00000005014	ATXN2	72	85.554	MGP_SPRETEiJ_G0028690	Atxn2	100	86.275	Mus_spretus
ENSGAGG00000005014	ATXN2	100	75.928	ENSMLUG00000015559	ATXN2	98	75.357	Myotis_lucifugus
ENSGAGG00000005014	ATXN2	100	75.596	ENSNLEG00000000484	ATXN2	100	73.302	Nomascus_leucogenys
ENSGAGG00000005014	ATXN2	85	97.143	ENSMEUG00000012244	-	80	97.143	Notamacropus_eugenii
ENSGAGG00000005014	ATXN2	100	85.211	ENSOPRG00000014599	ATXN2	99	71.238	Ochotona_princeps
ENSGAGG00000005014	ATXN2	100	73.719	ENSODEG00000010798	ATXN2	100	74.004	Octodon_degus
ENSGAGG00000005014	ATXN2	86	88.535	ENSOANG00000004796	ATXN2	100	75.758	Ornithorhynchus_anatinus
ENSGAGG00000005014	ATXN2	100	74.004	ENSOCUG00000002855	ATXN2	65	82.865	Oryctolagus_cuniculus
ENSGAGG00000005014	ATXN2	98	70.000	ENSORLG00000003606	atxn2	94	69.565	Oryzias_latipes
ENSGAGG00000005014	ATXN2	99	58.442	ENSORLG00020000785	atxn2	94	58.541	Oryzias_latipes_hni
ENSGAGG00000005014	ATXN2	99	58.635	ENSORLG00015012345	atxn2	94	58.987	Oryzias_latipes_hsok
ENSGAGG00000005014	ATXN2	99	59.018	ENSOMEG00000020080	atxn2	95	58.638	Oryzias_melastigma
ENSGAGG00000005014	ATXN2	100	74.547	ENSOGAG00000000609	ATXN2	81	74.833	Otolemur_garnettii
ENSGAGG00000005014	ATXN2	100	76.784	ENSOARG00000018223	ATXN2	98	75.262	Ovis_aries
ENSGAGG00000005014	ATXN2	100	76.023	ENSPPAG00000028043	ATXN2	100	74.881	Pan_paniscus
ENSGAGG00000005014	ATXN2	100	75.928	ENSPTRG00000029540	ATXN2	100	74.976	Pan_troglodytes
ENSGAGG00000005014	ATXN2	100	75.405	ENSPANG00000017168	ATXN2	100	73.209	Papio_anubis
ENSGAGG00000005014	ATXN2	100	63.353	ENSPKIG00000023134	atxn2	94	63.023	Paramormyrops_kingsleyae
ENSGAGG00000005014	ATXN2	100	72.183	ENSPMGG00000005074	atxn2	100	50.633	Periophthalmus_magnuspinnatus
ENSGAGG00000005014	ATXN2	86	71.476	ENSPEMG00000015340	Atxn2	100	84.720	Peromyscus_maniculatus_bairdii
ENSGAGG00000005014	ATXN2	57	86.813	ENSPCIG00000006165	-	94	84.192	Phascolarctos_cinereus
ENSGAGG00000005014	ATXN2	100	55.446	ENSPFOG00000005857	atxn2	95	54.886	Poecilia_formosa
ENSGAGG00000005014	ATXN2	100	60.020	ENSPLAG00000015241	atxn2	95	59.086	Poecilia_latipinna
ENSGAGG00000005014	ATXN2	100	60.516	ENSPMEG00000016681	atxn2	95	60.079	Poecilia_mexicana
ENSGAGG00000005014	ATXN2	100	72.318	ENSPREG00000014825	atxn2	95	60.218	Poecilia_reticulata
ENSGAGG00000005014	ATXN2	100	75.691	ENSPPYG00000004963	ATXN2	84	75.977	Pongo_abelii
ENSGAGG00000005014	ATXN2	66	86.145	ENSPCAG00000004216	-	50	86.145	Procavia_capensis
ENSGAGG00000005014	ATXN2	99	74.017	ENSPCOG00000022031	ATXN2	99	74.019	Propithecus_coquereli
ENSGAGG00000005014	ATXN2	99	86.972	ENSPVAG00000013179	ATXN2	75	86.207	Pteropus_vampyrus
ENSGAGG00000005014	ATXN2	60	54.530	ENSPNYG00000016981	atxn2	78	65.747	Pundamilia_nyererei
ENSGAGG00000005014	ATXN2	100	61.416	ENSPNAG00000010889	atxn2	94	61.416	Pygocentrus_nattereri
ENSGAGG00000005014	ATXN2	100	74.430	ENSRNOG00000001256	Atxn2	97	74.095	Rattus_norvegicus
ENSGAGG00000005014	ATXN2	100	73.166	ENSRBIG00000039212	ATXN2	100	73.184	Rhinopithecus_bieti
ENSGAGG00000005014	ATXN2	100	75.786	ENSRROG00000031170	ATXN2	100	74.302	Rhinopithecus_roxellana
ENSGAGG00000005014	ATXN2	100	74.395	ENSSBOG00000031563	ATXN2	100	73.302	Saimiri_boliviensis_boliviensis
ENSGAGG00000005014	ATXN2	100	75.427	ENSSHAG00000007304	ATXN2	98	75.427	Sarcophilus_harrisii
ENSGAGG00000005014	ATXN2	100	55.098	ENSSFOG00015017229	atxn2	100	54.206	Scleropages_formosus
ENSGAGG00000005014	ATXN2	100	73.010	ENSSMAG00000004627	atxn2	95	73.010	Scophthalmus_maximus
ENSGAGG00000005014	ATXN2	100	60.213	ENSSDUG00000001223	atxn2	95	59.923	Seriola_dumerili
ENSGAGG00000005014	ATXN2	95	83.857	ENSSARG00000006291	ATXN2	80	95.813	Sorex_araneus
ENSGAGG00000005014	ATXN2	99	73.260	ENSSPAG00000000377	atxn2	93	60.636	Stegastes_partitus
ENSGAGG00000005014	ATXN2	100	86.777	ENSSSCG00000009834	ATXN2	91	86.983	Sus_scrofa
ENSGAGG00000005014	ATXN2	100	92.269	ENSTGUG00000006497	ATXN2	98	92.269	Taeniopygia_guttata
ENSGAGG00000005014	ATXN2	94	58.498	ENSTRUG00000016801	atxn2	100	51.757	Takifugu_rubripes
ENSGAGG00000005014	ATXN2	81	86.239	ENSTBEG00000001985	ATXN2	76	86.239	Tupaia_belangeri
ENSGAGG00000005014	ATXN2	90	96.798	ENSTTRG00000000952	ATXN2	74	96.798	Tursiops_truncatus
ENSGAGG00000005014	ATXN2	93	94.488	ENSVPAG00000005940	ATXN2	90	93.750	Vicugna_pacos
ENSGAGG00000005014	ATXN2	60	56.066	ENSXCOG00000010001	atxn2	99	56.814	Xiphophorus_couchianus
ENSGAGG00000005014	ATXN2	100	60.576	ENSXMAG00000003481	atxn2	95	60.040	Xiphophorus_maculatus