EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000005331 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 3692 bases
Position: chrPPEB01005037.1:49494-53185
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000006594	zf-C2H2	PF00096.26	4e-35	1	6
ENSGAGP00000006594	zf-C2H2	PF00096.26	4e-35	2	6
ENSGAGP00000006594	zf-C2H2	PF00096.26	4e-35	3	6
ENSGAGP00000006594	zf-C2H2	PF00096.26	4e-35	4	6
ENSGAGP00000006594	zf-C2H2	PF00096.26	4e-35	5	6
ENSGAGP00000006594	zf-C2H2	PF00096.26	4e-35	6	6
ENSGAGP00000006594	zf-met	PF12874.7	4.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000007668	-	828	-	ENSGAGP00000006594	275 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000005331's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000005331's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000005331	-	80	49.756	ENSGAGG00000020134	-	67	49.756
ENSGAGG00000005331	-	99	52.047	ENSGAGG00000011399	-	97	52.047
ENSGAGG00000005331	-	99	47.845	ENSGAGG00000001387	-	68	47.845
ENSGAGG00000005331	-	91	46.581	ENSGAGG00000001645	-	73	46.581
ENSGAGG00000005331	-	80	52.000	ENSGAGG00000015232	-	70	52.000
ENSGAGG00000005331	-	86	56.923	ENSGAGG00000002179	-	99	46.552
ENSGAGG00000005331	-	97	47.436	ENSGAGG00000007230	-	96	47.436
ENSGAGG00000005331	-	91	47.619	ENSGAGG00000013851	-	90	47.619
ENSGAGG00000005331	-	87	42.574	ENSGAGG00000022571	ZNF319	88	42.574
ENSGAGG00000005331	-	83	57.843	ENSGAGG00000006323	-	91	53.846
ENSGAGG00000005331	-	92	51.415	ENSGAGG00000002214	-	87	50.718
ENSGAGG00000005331	-	80	54.494	ENSGAGG00000000971	-	90	54.494
ENSGAGG00000005331	-	88	49.378	ENSGAGG00000001469	-	94	52.727
ENSGAGG00000005331	-	81	63.889	ENSGAGG00000004740	-	84	63.889
ENSGAGG00000005331	-	80	64.957	ENSGAGG00000017986	-	91	64.957
ENSGAGG00000005331	-	75	39.855	ENSGAGG00000003095	ZNF865	80	39.855
ENSGAGG00000005331	-	81	48.858	ENSGAGG00000019349	-	74	48.858
ENSGAGG00000005331	-	89	47.547	ENSGAGG00000011574	-	88	48.374
ENSGAGG00000005331	-	92	48.585	ENSGAGG00000002828	-	76	54.187
ENSGAGG00000005331	-	80	56.944	ENSGAGG00000020168	-	74	56.944
ENSGAGG00000005331	-	88	45.928	ENSGAGG00000018445	-	88	49.804
ENSGAGG00000005331	-	67	46.324	ENSGAGG00000015899	GFI1	98	46.324
ENSGAGG00000005331	-	91	60.150	ENSGAGG00000014389	-	96	60.150
ENSGAGG00000005331	-	93	45.064	ENSGAGG00000018885	-	73	45.064
ENSGAGG00000005331	-	80	53.077	ENSGAGG00000011487	-	77	53.077
ENSGAGG00000005331	-	91	55.128	ENSGAGG00000004926	-	91	55.128
ENSGAGG00000005331	-	83	54.610	ENSGAGG00000013021	-	86	54.610
ENSGAGG00000005331	-	84	48.148	ENSGAGG00000011366	-	96	48.148
ENSGAGG00000005331	-	88	47.895	ENSGAGG00000006846	-	96	50.568
ENSGAGG00000005331	-	80	51.163	ENSGAGG00000006848	-	55	50.909
ENSGAGG00000005331	-	88	44.803	ENSGAGG00000012452	-	77	45.230
ENSGAGG00000005331	-	67	43.571	ENSGAGG00000021327	GFI1B	50	43.571
ENSGAGG00000005331	-	88	53.846	ENSGAGG00000006683	-	91	56.140
ENSGAGG00000005331	-	92	52.055	ENSGAGG00000010833	-	87	51.429
ENSGAGG00000005331	-	93	49.541	ENSGAGG00000020594	-	90	49.541
ENSGAGG00000005331	-	81	51.534	ENSGAGG00000015451	-	89	51.534
ENSGAGG00000005331	-	94	51.485	ENSGAGG00000008773	-	86	51.485
ENSGAGG00000005331	-	89	58.772	ENSGAGG00000010492	-	88	58.772
ENSGAGG00000005331	-	99	49.573	ENSGAGG00000006960	-	87	49.573
ENSGAGG00000005331	-	96	61.333	ENSGAGG00000016529	-	94	61.333
ENSGAGG00000005331	-	79	54.667	ENSGAGG00000005805	-	80	54.749
ENSGAGG00000005331	-	80	51.538	ENSGAGG00000017640	-	63	51.538
ENSGAGG00000005331	-	85	50.218	ENSGAGG00000009739	-	98	50.218
ENSGAGG00000005331	-	88	61.702	ENSGAGG00000009272	-	98	53.670
ENSGAGG00000005331	-	92	50.228	ENSGAGG00000014356	-	76	55.782
ENSGAGG00000005331	-	99	49.145	ENSGAGG00000010324	-	80	49.145

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000005331	-	80	49.419	ENSACIG00000017013	-	54	49.419	Amphilophus_citrinellus
ENSGAGG00000005331	-	92	54.110	ENSAMXG00000035683	-	95	54.110	Astyanax_mexicanus
ENSGAGG00000005331	-	95	50.877	ENSCPBG00000002063	-	78	50.877	Chrysemys_picta_bellii
ENSGAGG00000005331	-	68	46.193	ENSHCOG00000001292	-	64	46.193	Hippocampus_comes
ENSGAGG00000005331	-	79	48.000	ENSHCOG00000014786	-	95	48.000	Hippocampus_comes
ENSGAGG00000005331	-	83	58.824	ENSIPUG00000015294	-	51	58.824	Ictalurus_punctatus
ENSGAGG00000005331	-	81	57.143	ENSIPUG00000015601	-	60	57.143	Ictalurus_punctatus
ENSGAGG00000005331	-	80	51.825	ENSORLG00020001707	-	76	51.825	Oryzias_latipes_hni
ENSGAGG00000005331	-	80	55.319	ENSPCIG00000019333	-	93	55.319	Phascolarctos_cinereus
ENSGAGG00000005331	-	79	51.376	ENSPFOG00000024567	-	99	48.744	Poecilia_formosa
ENSGAGG00000005331	-	63	45.614	ENSPFOG00000011209	-	52	44.828	Poecilia_formosa
ENSGAGG00000005331	-	80	42.857	ENSPMEG00000016762	-	82	42.857	Poecilia_mexicana
ENSGAGG00000005331	-	92	48.837	ENSPNAG00000009741	-	54	48.837	Pygocentrus_nattereri
ENSGAGG00000005331	-	75	51.244	ENSPNAG00000018409	-	81	51.244	Pygocentrus_nattereri
ENSGAGG00000005331	-	93	49.479	ENSPNAG00000008491	-	75	49.479	Pygocentrus_nattereri