EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000005383 (Gene tree)
Gene ID: -
Gene Symbol: BLM
Alias: BS|RECQ2|RECQL3
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 32172 bases
Position: chrPPEB01011853.1:1-32172
Accession: 1058
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000007424	BDHCT	PF08072.11	4.1e-22	1	1
ENSGAGP00000007415	BDHCT	PF08072.11	4.3e-22	1	1
ENSGAGP00000007435	BDHCT	PF08072.11	6.4e-22	1	1
ENSGAGP00000007360	DEAD	PF00270.29	2.4e-19	1	1
ENSGAGP00000007424	DEAD	PF00270.29	3.7e-19	1	1
ENSGAGP00000007415	DEAD	PF00270.29	3.8e-19	1	1
ENSGAGP00000007435	DEAD	PF00270.29	4.5e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000008589	BLM-204	4391	-	ENSGAGP00000007435	1322 (aa)	-	-
ENSGAGT00000008505	BLM-201	2889	-	ENSGAGP00000007360	963 (aa)	-	-
ENSGAGT00000008564	BLM-202	3012	-	ENSGAGP00000007415	1003 (aa)	-	-
ENSGAGT00000008574	BLM-203	2913	-	ENSGAGP00000007424	970 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000005383's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000005383's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000005383	BLM	56	39.187	ENSGAGG00000025428	RECQL	79	39.187

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000005383	BLM	94	78.211	ENSG00000197299	BLM	90	52.242	Homo_sapiens
ENSGAGG00000005383	BLM	99	52.329	ENSAPOG00000017966	blm	66	55.895	Acanthochromis_polyacanthus
ENSGAGG00000005383	BLM	79	77.236	ENSAMEG00000013843	BLM	88	52.338	Ailuropoda_melanoleuca
ENSGAGG00000005383	BLM	73	70.521	ENSACIG00000023762	blm	52	70.521	Amphilophus_citrinellus
ENSGAGG00000005383	BLM	97	54.133	ENSAOCG00000003318	blm	60	66.469	Amphiprion_ocellaris
ENSGAGG00000005383	BLM	99	53.307	ENSAPEG00000018105	blm	64	56.663	Amphiprion_percula
ENSGAGG00000005383	BLM	83	71.661	ENSATEG00000006421	blm	57	71.661	Anabas_testudineus
ENSGAGG00000005383	BLM	99	67.113	ENSAPLG00000006878	BLM	85	69.700	Anas_platyrhynchos
ENSGAGG00000005383	BLM	92	82.172	ENSACAG00000014275	BLM	88	53.587	Anolis_carolinensis
ENSGAGG00000005383	BLM	79	77.561	ENSANAG00000038415	BLM	88	52.413	Aotus_nancymaae
ENSGAGG00000005383	BLM	81	70.847	ENSACLG00000020354	blm	51	70.847	Astatotilapia_calliptera
ENSGAGG00000005383	BLM	83	69.185	ENSAMXG00000016970	blm	64	57.540	Astyanax_mexicanus
ENSGAGG00000005383	BLM	85	78.372	ENSBTAG00000020301	BLM	87	58.523	Bos_taurus
ENSGAGG00000005383	BLM	69	38.981	WBGene00001865	him-6	71	39.256	Caenorhabditis_elegans
ENSGAGG00000005383	BLM	94	63.250	ENSCJAG00000009803	BLM	64	63.497	Callithrix_jacchus
ENSGAGG00000005383	BLM	87	71.366	ENSCAFG00000012385	BLM	64	62.923	Canis_familiaris
ENSGAGG00000005383	BLM	87	71.512	ENSCAFG00020016111	BLM	81	76.461	Canis_lupus_dingo
ENSGAGG00000005383	BLM	92	75.478	ENSCHIG00000010329	BLM	87	57.955	Capra_hircus
ENSGAGG00000005383	BLM	94	77.561	ENSTSYG00000012368	BLM	64	77.561	Carlito_syrichta
ENSGAGG00000005383	BLM	71	76.259	ENSCAPG00000017976	BLM	87	65.755	Cavia_aperea
ENSGAGG00000005383	BLM	96	71.684	ENSCPOG00000001761	BLM	88	51.543	Cavia_porcellus
ENSGAGG00000005383	BLM	97	61.824	ENSCCAG00000023069	BLM	88	52.331	Cebus_capucinus
ENSGAGG00000005383	BLM	79	78.374	ENSCATG00000040609	BLM	91	72.207	Cercocebus_atys
ENSGAGG00000005383	BLM	93	77.236	ENSCLAG00000012111	BLM	63	77.236	Chinchilla_lanigera
ENSGAGG00000005383	BLM	79	78.374	ENSCSAG00000017040	BLM	88	52.628	Chlorocebus_sabaeus
ENSGAGG00000005383	BLM	90	64.013	ENSCHOG00000006255	BLM	82	64.013	Choloepus_hoffmanni
ENSGAGG00000005383	BLM	98	92.105	ENSCPBG00000025000	BLM	89	97.900	Chrysemys_picta_bellii
ENSGAGG00000005383	BLM	60	35.678	ENSCSAVG00000007521	-	98	35.678	Ciona_savignyi
ENSGAGG00000005383	BLM	92	53.520	ENSCANG00000034808	BLM	99	46.499	Colobus_angolensis_palliatus
ENSGAGG00000005383	BLM	81	77.614	ENSCGRG00001024897	Blm	89	52.003	Cricetulus_griseus_chok1gshd
ENSGAGG00000005383	BLM	51	77.743	ENSCGRG00000016261	Blm	97	44.606	Cricetulus_griseus_crigri
ENSGAGG00000005383	BLM	80	65.767	ENSCSEG00000013483	blm	68	56.489	Cynoglossus_semilaevis
ENSGAGG00000005383	BLM	82	74.919	ENSDARG00000077089	blm	65	58.635	Danio_rerio
ENSGAGG00000005383	BLM	94	61.530	ENSDNOG00000010159	BLM	88	51.085	Dasypus_novemcinctus
ENSGAGG00000005383	BLM	93	61.276	ENSDORG00000011033	Blm	85	61.496	Dipodomys_ordii
ENSGAGG00000005383	BLM	85	48.689	ENSETEG00000015019	BLM	62	49.412	Echinops_telfairi
ENSGAGG00000005383	BLM	57	58.018	ENSEBUG00000015743	-	81	57.989	Eptatretus_burgeri
ENSGAGG00000005383	BLM	94	73.684	ENSEASG00005006727	BLM	89	51.094	Equus_asinus_asinus
ENSGAGG00000005383	BLM	90	78.125	ENSECAG00000011405	BLM	88	52.742	Equus_caballus
ENSGAGG00000005383	BLM	96	57.445	ENSEEUG00000001434	BLM	67	59.385	Erinaceus_europaeus
ENSGAGG00000005383	BLM	82	72.964	ENSELUG00000019098	blm	63	56.940	Esox_lucius
ENSGAGG00000005383	BLM	79	77.398	ENSFCAG00000006087	BLM	88	51.988	Felis_catus
ENSGAGG00000005383	BLM	94	63.298	ENSFALG00000010981	BLM	78	61.240	Ficedula_albicollis
ENSGAGG00000005383	BLM	91	59.612	ENSFDAG00000012658	BLM	88	43.997	Fukomys_damarensis
ENSGAGG00000005383	BLM	95	53.711	ENSFHEG00000002553	blm	66	53.734	Fundulus_heteroclitus
ENSGAGG00000005383	BLM	83	69.268	ENSGMOG00000016431	blm	81	62.500	Gadus_morhua
ENSGAGG00000005383	BLM	97	65.494	ENSGALG00000008256	BLM	88	58.067	Gallus_gallus
ENSGAGG00000005383	BLM	70	66.962	ENSGAFG00000001117	blm	68	56.277	Gambusia_affinis
ENSGAGG00000005383	BLM	71	70.847	ENSGACG00000010863	blm	100	71.810	Gasterosteus_aculeatus
ENSGAGG00000005383	BLM	94	78.374	ENSGGOG00000007710	BLM	91	72.207	Gorilla_gorilla
ENSGAGG00000005383	BLM	81	70.847	ENSHBUG00000015943	blm	51	70.847	Haplochromis_burtoni
ENSGAGG00000005383	BLM	91	76.404	ENSHGLG00000013231	BLM	89	50.550	Heterocephalus_glaber_female
ENSGAGG00000005383	BLM	93	54.015	ENSHCOG00000011455	blm	86	54.015	Hippocampus_comes
ENSGAGG00000005383	BLM	84	65.014	ENSIPUG00000000529	blm	70	65.014	Ictalurus_punctatus
ENSGAGG00000005383	BLM	80	76.726	ENSSTOG00000005000	BLM	55	76.726	Ictidomys_tridecemlineatus
ENSGAGG00000005383	BLM	93	57.222	ENSJJAG00000016322	Blm	85	57.599	Jaculus_jaculus
ENSGAGG00000005383	BLM	78	64.965	ENSKMAG00000016608	blm	65	55.923	Kryptolebias_marmoratus
ENSGAGG00000005383	BLM	70	66.813	ENSLBEG00000018729	blm	89	62.324	Labrus_bergylta
ENSGAGG00000005383	BLM	79	78.120	ENSLACG00000006490	BLM	88	52.675	Latimeria_chalumnae
ENSGAGG00000005383	BLM	95	57.895	ENSLOCG00000014302	blm	70	58.950	Lepisosteus_oculatus
ENSGAGG00000005383	BLM	79	78.374	ENSMFAG00000042982	BLM	91	71.935	Macaca_fascicularis
ENSGAGG00000005383	BLM	79	78.211	ENSMMUG00000019526	BLM	91	71.935	Macaca_mulatta
ENSGAGG00000005383	BLM	94	62.555	ENSMNEG00000031251	BLM	91	71.662	Macaca_nemestrina
ENSGAGG00000005383	BLM	94	73.496	ENSMLEG00000032934	BLM	88	50.680	Mandrillus_leucophaeus
ENSGAGG00000005383	BLM	98	52.584	ENSMAMG00000008726	blm	65	56.413	Mastacembelus_armatus
ENSGAGG00000005383	BLM	81	70.847	ENSMZEG00005022323	blm	52	70.847	Maylandia_zebra
ENSGAGG00000005383	BLM	93	77.581	ENSMAUG00000008953	Blm	88	53.061	Mesocricetus_auratus
ENSGAGG00000005383	BLM	96	59.517	ENSMICG00000034442	BLM	54	77.207	Microcebus_murinus
ENSGAGG00000005383	BLM	83	77.941	ENSMOCG00000016367	Blm	88	52.230	Microtus_ochrogaster
ENSGAGG00000005383	BLM	96	54.545	ENSMMOG00000006959	blm	65	56.973	Mola_mola
ENSGAGG00000005383	BLM	85	74.332	ENSMODG00000019449	BLM	88	54.457	Monodelphis_domestica
ENSGAGG00000005383	BLM	75	66.374	ENSMALG00000007323	blm	57	71.173	Monopterus_albus
ENSGAGG00000005383	BLM	82	76.129	MGP_CAROLIEiJ_G0029907	Blm	64	62.555	Mus_caroli
ENSGAGG00000005383	BLM	82	76.452	ENSMUSG00000030528	Blm	64	63.060	Mus_musculus
ENSGAGG00000005383	BLM	82	76.774	MGP_PahariEiJ_G0013129	Blm	51	76.774	Mus_pahari
ENSGAGG00000005383	BLM	82	76.613	MGP_SPRETEiJ_G0031009	Blm	89	51.766	Mus_spretus
ENSGAGG00000005383	BLM	73	77.878	ENSMPUG00000015657	BLM	98	51.300	Mustela_putorius_furo
ENSGAGG00000005383	BLM	99	58.350	ENSMLUG00000014697	BLM	88	52.711	Myotis_lucifugus
ENSGAGG00000005383	BLM	89	72.605	ENSNGAG00000001275	Blm	89	51.883	Nannospalax_galili
ENSGAGG00000005383	BLM	81	71.010	ENSNBRG00000019702	blm	52	71.010	Neolamprologus_brichardi
ENSGAGG00000005383	BLM	94	60.435	ENSNLEG00000012087	BLM	83	61.074	Nomascus_leucogenys
ENSGAGG00000005383	BLM	77	75.000	ENSMEUG00000007253	BLM	53	75.000	Notamacropus_eugenii
ENSGAGG00000005383	BLM	92	77.265	ENSOPRG00000011667	BLM	82	77.265	Ochotona_princeps
ENSGAGG00000005383	BLM	93	59.061	ENSODEG00000015373	BLM	85	59.324	Octodon_degus
ENSGAGG00000005383	BLM	87	66.617	ENSONIG00000015193	blm	58	62.910	Oreochromis_niloticus
ENSGAGG00000005383	BLM	63	78.140	ENSOANG00000009316	-	80	78.140	Ornithorhynchus_anatinus
ENSGAGG00000005383	BLM	86	78.125	ENSOCUG00000013969	BLM	88	50.602	Oryctolagus_cuniculus
ENSGAGG00000005383	BLM	95	55.059	ENSORLG00000008110	blm	55	66.864	Oryzias_latipes
ENSGAGG00000005383	BLM	95	55.059	ENSORLG00020004812	blm	55	66.716	Oryzias_latipes_hni
ENSGAGG00000005383	BLM	95	54.894	ENSORLG00015018640	blm	86	56.718	Oryzias_latipes_hsok
ENSGAGG00000005383	BLM	72	67.270	ENSOMEG00000023545	blm	61	64.823	Oryzias_melastigma
ENSGAGG00000005383	BLM	99	56.450	ENSOGAG00000005708	BLM	89	50.409	Otolemur_garnettii
ENSGAGG00000005383	BLM	92	75.637	ENSOARG00000012875	BLM	88	52.042	Ovis_aries
ENSGAGG00000005383	BLM	94	78.049	ENSPPAG00000032173	BLM	88	52.377	Pan_paniscus
ENSGAGG00000005383	BLM	91	77.398	ENSPPRG00000002471	BLM	88	52.135	Panthera_pardus
ENSGAGG00000005383	BLM	91	77.362	ENSPTIG00000016168	BLM	88	52.513	Panthera_tigris_altaica
ENSGAGG00000005383	BLM	93	78.454	ENSPTRG00000007460	BLM	88	52.256	Pan_troglodytes
ENSGAGG00000005383	BLM	79	78.211	ENSPANG00000018572	BLM	91	71.935	Papio_anubis
ENSGAGG00000005383	BLM	85	70.795	ENSPKIG00000008954	blm	65	57.173	Paramormyrops_kingsleyae
ENSGAGG00000005383	BLM	53	94.175	ENSPSIG00000009792	BLM	92	94.175	Pelodiscus_sinensis
ENSGAGG00000005383	BLM	64	69.839	ENSPMGG00000006629	blm	79	60.898	Periophthalmus_magnuspinnatus
ENSGAGG00000005383	BLM	87	73.204	ENSPEMG00000017348	Blm	64	63.656	Peromyscus_maniculatus_bairdii
ENSGAGG00000005383	BLM	68	57.887	ENSPMAG00000000445	blm	94	56.719	Petromyzon_marinus
ENSGAGG00000005383	BLM	80	79.133	ENSPCIG00000006609	BLM	89	54.001	Phascolarctos_cinereus
ENSGAGG00000005383	BLM	80	68.266	ENSPFOG00000005059	blm	51	70.962	Poecilia_formosa
ENSGAGG00000005383	BLM	65	69.841	ENSPLAG00000017344	blm	65	55.748	Poecilia_latipinna
ENSGAGG00000005383	BLM	79	70.962	ENSPMEG00000000321	blm	55	65.932	Poecilia_mexicana
ENSGAGG00000005383	BLM	77	66.224	ENSPREG00000007715	blm	65	56.352	Poecilia_reticulata
ENSGAGG00000005383	BLM	94	77.073	ENSPPYG00000006784	BLM	88	51.952	Pongo_abelii
ENSGAGG00000005383	BLM	78	68.331	ENSPCAG00000008960	BLM	59	68.466	Procavia_capensis
ENSGAGG00000005383	BLM	96	51.406	ENSPCOG00000000439	BLM	88	45.833	Propithecus_coquereli
ENSGAGG00000005383	BLM	77	80.782	ENSPVAG00000011642	BLM	55	80.782	Pteropus_vampyrus
ENSGAGG00000005383	BLM	97	45.000	ENSPNYG00000010956	blm	62	47.271	Pundamilia_nyererei
ENSGAGG00000005383	BLM	78	67.610	ENSPNAG00000011714	blm	65	58.476	Pygocentrus_nattereri
ENSGAGG00000005383	BLM	92	76.797	ENSRNOG00000011213	Blm	88	50.826	Rattus_norvegicus
ENSGAGG00000005383	BLM	94	77.886	ENSRBIG00000029656	BLM	91	71.935	Rhinopithecus_bieti
ENSGAGG00000005383	BLM	94	77.886	ENSRROG00000037871	BLM	91	71.935	Rhinopithecus_roxellana
ENSGAGG00000005383	BLM	66	78.732	ENSSBOG00000030957	BLM	87	50.000	Saimiri_boliviensis_boliviensis
ENSGAGG00000005383	BLM	80	78.778	ENSSHAG00000007988	BLM	89	54.070	Sarcophilus_harrisii
ENSGAGG00000005383	BLM	68	71.840	ENSSFOG00015015462	blm	61	62.987	Scleropages_formosus
ENSGAGG00000005383	BLM	84	62.434	ENSSMAG00000001120	blm	58	62.763	Scophthalmus_maximus
ENSGAGG00000005383	BLM	76	66.374	ENSSDUG00000010955	blm	63	56.366	Seriola_dumerili
ENSGAGG00000005383	BLM	84	66.520	ENSSLDG00000000634	blm	63	56.833	Seriola_lalandi_dorsalis
ENSGAGG00000005383	BLM	94	57.158	ENSSARG00000006398	BLM	70	55.487	Sorex_araneus
ENSGAGG00000005383	BLM	99	67.409	ENSSPUG00000000013	BLM	86	67.713	Sphenodon_punctatus
ENSGAGG00000005383	BLM	73	70.962	ENSSPAG00000013999	blm	51	70.962	Stegastes_partitus
ENSGAGG00000005383	BLM	98	72.230	ENSSSCG00000001816	BLM	92	52.986	Sus_scrofa
ENSGAGG00000005383	BLM	94	55.952	ENSTGUG00000009959	-	86	57.185	Taeniopygia_guttata
ENSGAGG00000005383	BLM	81	68.893	ENSTRUG00000019860	blm	64	54.104	Takifugu_rubripes
ENSGAGG00000005383	BLM	85	65.719	ENSTNIG00000019246	blm	65	55.032	Tetraodon_nigroviridis
ENSGAGG00000005383	BLM	71	76.099	ENSTBEG00000006706	BLM	52	76.099	Tupaia_belangeri
ENSGAGG00000005383	BLM	90	78.289	ENSTTRG00000016386	BLM	88	52.449	Tursiops_truncatus
ENSGAGG00000005383	BLM	79	77.236	ENSUMAG00000009105	BLM	86	74.769	Ursus_maritimus
ENSGAGG00000005383	BLM	94	72.195	ENSVPAG00000000085	BLM	88	50.375	Vicugna_pacos
ENSGAGG00000005383	BLM	93	77.915	ENSVVUG00000006402	BLM	62	77.915	Vulpes_vulpes
ENSGAGG00000005383	BLM	88	80.360	ENSXETG00000007847	blm	53	80.360	Xenopus_tropicalis
ENSGAGG00000005383	BLM	79	66.884	ENSXCOG00000020227	blm	63	52.452	Xiphophorus_couchianus
ENSGAGG00000005383	BLM	66	71.126	ENSXMAG00000002951	blm	65	55.748	Xiphophorus_maculatus