EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000005447 (Gene tree)
Gene ID: -
Gene Symbol: TDRKH
Alias: TDRD2
Full Name: tudor and KH domain containing
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 11902 bases
Position: chrPPEB01003536.1:9583-21484
Accession: 11713
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000006752	KH_1	PF00013.29	8e-31	1	2
ENSGAGP00000006752	KH_1	PF00013.29	8e-31	2	2
ENSGAGP00000006757	KH_1	PF00013.29	8e-31	1	2
ENSGAGP00000006757	KH_1	PF00013.29	8e-31	2	2
ENSGAGP00000006752	TUDOR	PF00567.24	9.1e-29	1	1
ENSGAGP00000006757	TUDOR	PF00567.24	9.1e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000007840	TDRKH-201	1891	-	ENSGAGP00000006752	560 (aa)	-	-
ENSGAGT00000007845	TDRKH-202	2003	-	ENSGAGP00000006757	560 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000005447's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000005447's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000005447	TDRKH	100	63.194	ENSG00000182134	TDRKH	100	81.679	Homo_sapiens
ENSGAGG00000005447	TDRKH	90	66.538	ENSAMEG00000000421	TDRKH	99	61.658	Ailuropoda_melanoleuca
ENSGAGG00000005447	TDRKH	85	63.278	ENSACAG00000007457	TDRKH	95	63.278	Anolis_carolinensis
ENSGAGG00000005447	TDRKH	100	63.240	ENSANAG00000021663	TDRKH	97	66.469	Aotus_nancymaae
ENSGAGG00000005447	TDRKH	100	63.573	ENSBTAG00000021594	TDRKH	99	63.047	Bos_taurus
ENSGAGG00000005447	TDRKH	100	62.522	ENSCJAG00000007955	TDRKH	97	65.873	Callithrix_jacchus
ENSGAGG00000005447	TDRKH	100	63.684	ENSCAFG00000012856	TDRKH	99	63.158	Canis_familiaris
ENSGAGG00000005447	TDRKH	100	63.684	ENSCAFG00020009606	TDRKH	99	63.158	Canis_lupus_dingo
ENSGAGG00000005447	TDRKH	100	63.398	ENSCHIG00000025326	TDRKH	99	62.872	Capra_hircus
ENSGAGG00000005447	TDRKH	99	63.269	ENSTSYG00000010405	TDRKH	99	62.742	Carlito_syrichta
ENSGAGG00000005447	TDRKH	90	64.217	ENSCAPG00000007565	TDRKH	95	63.636	Cavia_aperea
ENSGAGG00000005447	TDRKH	100	63.478	ENSCPOG00000003556	TDRKH	99	62.957	Cavia_porcellus
ENSGAGG00000005447	TDRKH	100	61.815	ENSCCAG00000033931	TDRKH	97	66.075	Cebus_capucinus
ENSGAGG00000005447	TDRKH	100	63.415	ENSCATG00000041878	TDRKH	97	66.469	Cercocebus_atys
ENSGAGG00000005447	TDRKH	100	62.783	ENSCLAG00000001088	TDRKH	99	62.261	Chinchilla_lanigera
ENSGAGG00000005447	TDRKH	100	63.415	ENSCSAG00000001820	TDRKH	99	62.892	Chlorocebus_sabaeus
ENSGAGG00000005447	TDRKH	89	56.651	ENSCHOG00000000264	TDRKH	99	50.260	Choloepus_hoffmanni
ENSGAGG00000005447	TDRKH	97	93.900	ENSCPBG00000008824	TDRKH	90	94.074	Chrysemys_picta_bellii
ENSGAGG00000005447	TDRKH	100	63.066	ENSCANG00000037367	TDRKH	97	66.075	Colobus_angolensis_palliatus
ENSGAGG00000005447	TDRKH	98	62.500	ENSCGRG00001006583	-	99	61.964	Cricetulus_griseus_chok1gshd
ENSGAGG00000005447	TDRKH	95	48.073	ENSCGRG00001011699	-	98	48.073	Cricetulus_griseus_chok1gshd
ENSGAGG00000005447	TDRKH	95	48.073	ENSCGRG00000013230	-	98	48.073	Cricetulus_griseus_crigri
ENSGAGG00000005447	TDRKH	98	62.500	ENSCGRG00000012937	-	99	61.964	Cricetulus_griseus_crigri
ENSGAGG00000005447	TDRKH	88	66.667	ENSDNOG00000035650	TDRKH	97	66.071	Dasypus_novemcinctus
ENSGAGG00000005447	TDRKH	99	62.324	ENSDORG00000015322	Tdrkh	100	61.796	Dipodomys_ordii
ENSGAGG00000005447	TDRKH	99	62.021	ENSETEG00000008020	TDRKH	99	61.498	Echinops_telfairi
ENSGAGG00000005447	TDRKH	86	38.020	ENSEBUG00000010481	TDRKH	83	37.822	Eptatretus_burgeri
ENSGAGG00000005447	TDRKH	100	62.435	ENSEASG00005005213	TDRKH	99	61.913	Equus_asinus_asinus
ENSGAGG00000005447	TDRKH	100	62.807	ENSECAG00000013096	TDRKH	97	66.402	Equus_caballus
ENSGAGG00000005447	TDRKH	73	82.143	ENSEEUG00000015952	TDRKH	71	82.143	Erinaceus_europaeus
ENSGAGG00000005447	TDRKH	98	64.464	ENSFCAG00000010980	TDRKH	99	63.351	Felis_catus
ENSGAGG00000005447	TDRKH	100	62.087	ENSFDAG00000015315	TDRKH	99	61.565	Fukomys_damarensis
ENSGAGG00000005447	TDRKH	95	57.194	ENSGALG00000031812	TDRKH	93	57.194	Gallus_gallus
ENSGAGG00000005447	TDRKH	100	63.194	ENSGGOG00000025419	TDRKH	97	66.208	Gorilla_gorilla
ENSGAGG00000005447	TDRKH	100	63.021	ENSHGLG00000007478	TDRKH	99	62.500	Heterocephalus_glaber_female
ENSGAGG00000005447	TDRKH	100	63.021	ENSHGLG00100007927	TDRKH	99	62.500	Heterocephalus_glaber_male
ENSGAGG00000005447	TDRKH	100	63.573	ENSSTOG00000006506	TDRKH	99	63.047	Ictidomys_tridecemlineatus
ENSGAGG00000005447	TDRKH	100	61.796	ENSJJAG00000000323	Tdrkh	99	61.268	Jaculus_jaculus
ENSGAGG00000005447	TDRKH	71	58.140	ENSLACG00000017639	TDRKH	99	58.993	Latimeria_chalumnae
ENSGAGG00000005447	TDRKH	100	63.333	ENSLAFG00000006274	TDRKH	100	62.807	Loxodonta_africana
ENSGAGG00000005447	TDRKH	100	63.415	ENSMFAG00000041641	TDRKH	97	66.469	Macaca_fascicularis
ENSGAGG00000005447	TDRKH	98	63.993	ENSMMUG00000009096	TDRKH	97	66.469	Macaca_mulatta
ENSGAGG00000005447	TDRKH	100	63.415	ENSMNEG00000021524	TDRKH	97	66.469	Macaca_nemestrina
ENSGAGG00000005447	TDRKH	100	63.415	ENSMLEG00000033882	TDRKH	97	66.469	Mandrillus_leucophaeus
ENSGAGG00000005447	TDRKH	98	62.456	ENSMAUG00000019159	Tdrkh	99	61.930	Mesocricetus_auratus
ENSGAGG00000005447	TDRKH	100	62.892	ENSMICG00000010682	-	99	62.069	Microcebus_murinus
ENSGAGG00000005447	TDRKH	99	52.338	ENSMICG00000042330	-	99	51.986	Microcebus_murinus
ENSGAGG00000005447	TDRKH	90	49.112	ENSMOCG00000014074	-	90	48.323	Microtus_ochrogaster
ENSGAGG00000005447	TDRKH	92	62.428	ENSMOCG00000002113	-	93	62.042	Microtus_ochrogaster
ENSGAGG00000005447	TDRKH	100	64.200	ENSMODG00000018906	TDRKH	96	63.855	Monodelphis_domestica
ENSGAGG00000005447	TDRKH	99	62.392	MGP_CAROLIEiJ_G0025310	Tdrkh	99	61.872	Mus_caroli
ENSGAGG00000005447	TDRKH	99	62.218	ENSMUSG00000041912	Tdrkh	76	85.047	Mus_musculus
ENSGAGG00000005447	TDRKH	99	62.912	MGP_PahariEiJ_G0026753	Tdrkh	99	62.392	Mus_pahari
ENSGAGG00000005447	TDRKH	99	62.434	MGP_SPRETEiJ_G0026252	Tdrkh	99	61.905	Mus_spretus
ENSGAGG00000005447	TDRKH	97	62.970	ENSMPUG00000003558	TDRKH	100	62.105	Mustela_putorius_furo
ENSGAGG00000005447	TDRKH	98	63.799	ENSMLUG00000002213	TDRKH	99	62.697	Myotis_lucifugus
ENSGAGG00000005447	TDRKH	99	62.390	ENSNGAG00000017825	Tdrkh	99	61.863	Nannospalax_galili
ENSGAGG00000005447	TDRKH	100	63.021	ENSNLEG00000010284	TDRKH	97	66.208	Nomascus_leucogenys
ENSGAGG00000005447	TDRKH	99	55.440	ENSMEUG00000006144	TDRKH	99	55.517	Notamacropus_eugenii
ENSGAGG00000005447	TDRKH	81	72.222	ENSOPRG00000016049	TDRKH	81	72.222	Ochotona_princeps
ENSGAGG00000005447	TDRKH	100	62.674	ENSODEG00000009532	-	99	62.153	Octodon_degus
ENSGAGG00000005447	TDRKH	100	60.825	ENSODEG00000001075	-	99	60.481	Octodon_degus
ENSGAGG00000005447	TDRKH	98	58.897	ENSOCUG00000001387	TDRKH	98	58.824	Oryctolagus_cuniculus
ENSGAGG00000005447	TDRKH	52	51.163	ENSOGAG00000030085	-	98	49.502	Otolemur_garnettii
ENSGAGG00000005447	TDRKH	99	57.407	ENSOGAG00000001839	-	99	56.902	Otolemur_garnettii
ENSGAGG00000005447	TDRKH	98	55.018	ENSOGAG00000032601	-	98	55.018	Otolemur_garnettii
ENSGAGG00000005447	TDRKH	100	63.222	ENSOARG00000021052	TDRKH	99	62.697	Ovis_aries
ENSGAGG00000005447	TDRKH	100	63.368	ENSPPAG00000028994	TDRKH	99	62.847	Pan_paniscus
ENSGAGG00000005447	TDRKH	98	64.222	ENSPPRG00000001585	TDRKH	99	63.112	Panthera_pardus
ENSGAGG00000005447	TDRKH	98	64.222	ENSPTIG00000019916	TDRKH	99	63.112	Panthera_tigris_altaica
ENSGAGG00000005447	TDRKH	100	63.368	ENSPTRG00000001297	TDRKH	97	66.405	Pan_troglodytes
ENSGAGG00000005447	TDRKH	100	63.415	ENSPANG00000001986	TDRKH	97	66.469	Papio_anubis
ENSGAGG00000005447	TDRKH	96	81.885	ENSPSIG00000008541	TDRKH	100	81.885	Pelodiscus_sinensis
ENSGAGG00000005447	TDRKH	99	62.917	ENSPEMG00000011171	Tdrkh	99	62.390	Peromyscus_maniculatus_bairdii
ENSGAGG00000005447	TDRKH	100	64.274	ENSPCIG00000021201	TDRKH	99	63.932	Phascolarctos_cinereus
ENSGAGG00000005447	TDRKH	100	63.194	ENSPPYG00000000855	TDRKH	99	62.674	Pongo_abelii
ENSGAGG00000005447	TDRKH	98	61.863	ENSPCOG00000027505	TDRKH	99	60.825	Propithecus_coquereli
ENSGAGG00000005447	TDRKH	100	61.646	ENSPVAG00000005234	TDRKH	99	61.121	Pteropus_vampyrus
ENSGAGG00000005447	TDRKH	99	62.238	ENSRNOG00000020860	Tdrkh	99	61.713	Rattus_norvegicus
ENSGAGG00000005447	TDRKH	100	63.240	ENSRBIG00000044860	TDRKH	97	66.272	Rhinopithecus_bieti
ENSGAGG00000005447	TDRKH	100	63.240	ENSRROG00000036923	TDRKH	97	66.272	Rhinopithecus_roxellana
ENSGAGG00000005447	TDRKH	85	58.571	ENSSBOG00000034454	TDRKH	93	58.418	Saimiri_boliviensis_boliviensis
ENSGAGG00000005447	TDRKH	100	64.372	ENSSHAG00000015859	TDRKH	88	64.028	Sarcophilus_harrisii
ENSGAGG00000005447	TDRKH	98	56.667	ENSSARG00000008525	TDRKH	98	56.140	Sorex_araneus
ENSGAGG00000005447	TDRKH	93	72.368	ENSSPUG00000002369	TDRKH	97	72.368	Sphenodon_punctatus
ENSGAGG00000005447	TDRKH	99	62.917	ENSSSCG00000027770	TDRKH	100	62.390	Sus_scrofa
ENSGAGG00000005447	TDRKH	100	63.398	ENSTBEG00000011201	TDRKH	99	62.872	Tupaia_belangeri
ENSGAGG00000005447	TDRKH	100	57.712	ENSTTRG00000003149	TDRKH	99	57.268	Tursiops_truncatus
ENSGAGG00000005447	TDRKH	98	62.544	ENSUAMG00000019589	TDRKH	98	62.021	Ursus_americanus
ENSGAGG00000005447	TDRKH	98	62.544	ENSUMAG00000001456	TDRKH	98	62.021	Ursus_maritimus
ENSGAGG00000005447	TDRKH	100	62.937	ENSVPAG00000000666	TDRKH	99	62.413	Vicugna_pacos
ENSGAGG00000005447	TDRKH	100	63.176	ENSVVUG00000013241	TDRKH	98	65.953	Vulpes_vulpes
ENSGAGG00000005447	TDRKH	98	38.169	ENSXETG00000019909	tdrkh	99	37.997	Xenopus_tropicalis