EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000005511 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 8942 bases
Position: chrPPEB01005048.1:12441-21382
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000006840	La	PF05383.17	2.5e-19	1	1
ENSGAGP00000006838	La	PF05383.17	2.6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000007935	-	1383	-	ENSGAGP00000006838	460 (aa)	-	-
ENSGAGT00000007937	-	1305	-	ENSGAGP00000006840	434 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000005511's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000005511's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000005511	-	82	40.162	ENSGAGG00000010802	LARP6	54	41.892

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000005511	-	97	61.882	ENSAPLG00000004633	-	100	61.647	Anas_platyrhynchos
ENSGAGG00000005511	-	93	60.337	ENSACAG00000016739	-	100	59.615	Anolis_carolinensis
ENSGAGG00000005511	-	100	93.088	ENSCPBG00000011144	-	94	93.088	Chrysemys_picta_bellii
ENSGAGG00000005511	-	96	39.636	ENSELUG00000018609	-	90	39.498	Esox_lucius
ENSGAGG00000005511	-	97	60.284	ENSGALG00000044970	LARP6L	89	59.953	Gallus_gallus
ENSGAGG00000005511	-	97	53.089	ENSLACG00000014893	-	88	52.860	Latimeria_chalumnae
ENSGAGG00000005511	-	97	59.286	ENSMGAG00000001563	-	88	58.156	Meleagris_gallopavo
ENSGAGG00000005511	-	56	51.190	ENSPCIG00000009484	-	65	52.101	Phascolarctos_cinereus
ENSGAGG00000005511	-	97	41.995	ENSPNAG00000008072	-	94	43.794	Pygocentrus_nattereri
ENSGAGG00000005511	-	97	56.512	ENSXETG00000021887	larp6-like.1	89	56.512	Xenopus_tropicalis