EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000005805 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 903 bases
Position: chrPPEB01010736.1:19879-20781
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000007227	zf-C2H2	PF00096.26	1.1e-48	1	8
ENSGAGP00000007227	zf-C2H2	PF00096.26	1.1e-48	2	8
ENSGAGP00000007227	zf-C2H2	PF00096.26	1.1e-48	3	8
ENSGAGP00000007227	zf-C2H2	PF00096.26	1.1e-48	4	8
ENSGAGP00000007227	zf-C2H2	PF00096.26	1.1e-48	5	8
ENSGAGP00000007227	zf-C2H2	PF00096.26	1.1e-48	6	8
ENSGAGP00000007227	zf-C2H2	PF00096.26	1.1e-48	7	8
ENSGAGP00000007227	zf-C2H2	PF00096.26	1.1e-48	8	8
ENSGAGP00000007227	zf-met	PF12874.7	2.2e-10	1	2
ENSGAGP00000007227	zf-met	PF12874.7	2.2e-10	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000008357	-	903	-	ENSGAGP00000007227	300 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000005805's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000005805's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000005805	-	91	54.386	ENSGAGG00000006848	-	61	54.386
ENSGAGG00000005805	-	89	51.643	ENSGAGG00000006846	-	94	51.643
ENSGAGG00000005805	-	83	47.273	ENSGAGG00000015899	GFI1	100	47.273
ENSGAGG00000005805	-	100	70.000	ENSGAGG00000010324	-	80	70.000
ENSGAGG00000005805	-	82	48.810	ENSGAGG00000013021	-	98	48.810
ENSGAGG00000005805	-	83	58.130	ENSGAGG00000019349	-	72	58.130
ENSGAGG00000005805	-	85	56.977	ENSGAGG00000006960	-	79	58.921
ENSGAGG00000005805	-	99	63.514	ENSGAGG00000002214	-	89	63.306
ENSGAGG00000005805	-	91	56.048	ENSGAGG00000007230	-	91	56.048
ENSGAGG00000005805	-	100	64.372	ENSGAGG00000002179	-	98	64.372
ENSGAGG00000005805	-	80	54.749	ENSGAGG00000005331	-	79	54.667
ENSGAGG00000005805	-	100	76.333	ENSGAGG00000011487	-	83	74.818
ENSGAGG00000005805	-	100	62.085	ENSGAGG00000017640	-	73	62.085
ENSGAGG00000005805	-	82	35.000	ENSGAGG00000022082	PRDM15	51	34.583
ENSGAGG00000005805	-	100	59.504	ENSGAGG00000020594	-	92	59.504
ENSGAGG00000005805	-	100	52.848	ENSGAGG00000012452	-	82	52.848
ENSGAGG00000005805	-	94	57.000	ENSGAGG00000001645	-	60	60.169
ENSGAGG00000005805	-	100	60.000	ENSGAGG00000017986	-	92	58.974
ENSGAGG00000005805	-	87	52.245	ENSGAGG00000011366	-	97	52.245
ENSGAGG00000005805	-	83	62.445	ENSGAGG00000009739	-	99	62.445
ENSGAGG00000005805	-	85	35.043	ENSGAGG00000020362	PRDM5	68	34.008
ENSGAGG00000005805	-	93	58.378	ENSGAGG00000016529	-	89	58.378
ENSGAGG00000005805	-	100	60.086	ENSGAGG00000015451	-	88	60.086
ENSGAGG00000005805	-	83	59.322	ENSGAGG00000000971	-	95	59.322
ENSGAGG00000005805	-	99	58.091	ENSGAGG00000009272	-	97	60.000
ENSGAGG00000005805	-	100	48.387	ENSGAGG00000018885	-	75	48.387
ENSGAGG00000005805	-	100	57.377	ENSGAGG00000014356	-	80	57.377
ENSGAGG00000005805	-	83	46.185	ENSGAGG00000017094	-	50	46.667
ENSGAGG00000005805	-	100	62.348	ENSGAGG00000014389	-	97	62.348
ENSGAGG00000005805	-	100	59.908	ENSGAGG00000004740	-	95	59.908
ENSGAGG00000005805	-	83	58.120	ENSGAGG00000001387	-	58	58.120
ENSGAGG00000005805	-	85	54.545	ENSGAGG00000011399	-	90	54.545
ENSGAGG00000005805	-	91	62.222	ENSGAGG00000010492	-	85	62.222
ENSGAGG00000005805	-	100	61.290	ENSGAGG00000006683	-	99	60.227
ENSGAGG00000005805	-	83	40.435	ENSGAGG00000003095	ZNF865	84	40.435
ENSGAGG00000005805	-	83	55.844	ENSGAGG00000015232	-	70	55.844
ENSGAGG00000005805	-	100	56.808	ENSGAGG00000011574	-	94	56.808
ENSGAGG00000005805	-	99	51.104	ENSGAGG00000018445	-	90	51.104
ENSGAGG00000005805	-	83	52.252	ENSGAGG00000004926	-	95	50.521
ENSGAGG00000005805	-	99	70.370	ENSGAGG00000006323	-	98	65.854
ENSGAGG00000005805	-	83	60.504	ENSGAGG00000008773	-	86	58.871
ENSGAGG00000005805	-	99	56.148	ENSGAGG00000013851	-	93	56.148
ENSGAGG00000005805	-	83	44.304	ENSGAGG00000022571	ZNF319	99	44.304
ENSGAGG00000005805	-	99	62.500	ENSGAGG00000010833	-	90	62.500
ENSGAGG00000005805	-	83	57.709	ENSGAGG00000020168	-	70	57.709
ENSGAGG00000005805	-	100	60.656	ENSGAGG00000001469	-	100	60.656
ENSGAGG00000005805	-	100	67.667	ENSGAGG00000002828	-	80	67.667
ENSGAGG00000005805	-	99	65.854	ENSGAGG00000020134	-	66	65.854
ENSGAGG00000005805	-	93	44.375	ENSGAGG00000021327	GFI1B	64	44.375

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000005805	-	84	49.787	ENSAOCG00000022276	-	92	54.867	Amphiprion_ocellaris
ENSGAGG00000005805	-	83	51.770	ENSACLG00000026538	-	83	51.770	Astatotilapia_calliptera
ENSGAGG00000005805	-	84	52.023	ENSKMAG00000002448	-	80	52.023	Kryptolebias_marmoratus
ENSGAGG00000005805	-	84	53.503	ENSMODG00000024585	-	77	53.503	Monodelphis_domestica
ENSGAGG00000005805	-	83	53.202	ENSPCIG00000019488	-	80	53.202	Phascolarctos_cinereus
ENSGAGG00000005805	-	83	35.472	ENSPFOG00000008519	-	100	35.472	Poecilia_formosa
ENSGAGG00000005805	-	83	52.736	ENSPNYG00000018360	-	78	52.736	Pundamilia_nyererei
ENSGAGG00000005805	-	99	50.667	ENSSLDG00000018598	-	94	50.667	Seriola_lalandi_dorsalis
ENSGAGG00000005805	-	96	46.154	ENSXMAG00000022591	-	91	46.154	Xiphophorus_maculatus