EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSGAGG00000006054 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Gopherus_agassizii
Status
putative
Strand
Minus strand
Length
6544 bases
Position
chrPPEB01005713.1:53455-59998
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGAGP00000007569zf-CCCHPF00642.242.6e-0611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGAGT00000008738-2045-ENSGAGP00000007569122 (aa)--
Gene Model
Click here to download ENSGAGG00000006054's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000006054's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGAGG00000006054-7289.773ENSG00000160201U2AF16879.646Homo_sapiens
ENSGAGG00000006054-7289.773ENSG00000275895U2AF1L56879.646Homo_sapiens
ENSGAGG00000006054-10077.049ENSG00000161265U2AF1L46777.049Homo_sapiens
ENSGAGG00000006054-7389.888ENSAPOG00000008858-6976.744Acanthochromis_polyacanthus
ENSGAGG00000006054-7288.636ENSAPOG00000002292-5871.324Acanthochromis_polyacanthus
ENSGAGG00000006054-10085.246ENSAMEG00000000592-5585.246Ailuropoda_melanoleuca
ENSGAGG00000006054-10072.951ENSACIG00000016862U2AF1L56777.236Amphilophus_citrinellus
ENSGAGG00000006054-5782.609ENSACIG00000022868-7982.609Amphilophus_citrinellus
ENSGAGG00000006054-7288.636ENSAOCG00000015950-6776.423Amphiprion_ocellaris
ENSGAGG00000006054-7389.888ENSAOCG00000011990-6976.744Amphiprion_ocellaris
ENSGAGG00000006054-7288.636ENSAPEG00000001266-6776.423Amphiprion_percula
ENSGAGG00000006054-7389.888ENSAPEG00000015747-6975.969Amphiprion_percula
ENSGAGG00000006054-7288.636ENSATEG00000010841-5872.388Anabas_testudineus
ENSGAGG00000006054-7388.764ENSATEG00000017931-5775.969Anabas_testudineus
ENSGAGG00000006054-10082.787ENSANAG00000012083-10061.475Aotus_nancymaae
ENSGAGG00000006054-8764.486ENSANAG00000029994-5264.486Aotus_nancymaae
ENSGAGG00000006054-7287.500ENSACLG00000003526-5775.194Astatotilapia_calliptera
ENSGAGG00000006054-7388.764ENSACLG00000024829-5775.969Astatotilapia_calliptera
ENSGAGG00000006054-7389.888ENSAMXG00000034836u2af15969.504Astyanax_mexicanus
ENSGAGG00000006054-10085.246ENSBTAG00000023610U2AF1L45585.246Bos_taurus
ENSGAGG00000006054-7289.773ENSBTAG00000011645U2AF15970.504Bos_taurus
ENSGAGG00000006054-10085.246ENSCAFG00000006856-5585.246Canis_familiaris
ENSGAGG00000006054-7389.888ENSCAFG00020011412-6182.727Canis_lupus_dingo
ENSGAGG00000006054-7289.773ENSCAFG00020020321-6879.646Canis_lupus_dingo
ENSGAGG00000006054-10085.246ENSCAFG00020018413-10063.710Canis_lupus_dingo
ENSGAGG00000006054-10085.246ENSCHIG00000001219-5585.246Capra_hircus
ENSGAGG00000006054-7289.773ENSCHIG00000012917U2AF15970.504Capra_hircus
ENSGAGG00000006054-7289.773ENSCAPG00000009172-6879.646Cavia_aperea
ENSGAGG00000006054-7289.773ENSCCAG00000036938-6879.646Cebus_capucinus
ENSGAGG00000006054-10079.508ENSCATG00000038848-5579.508Cercocebus_atys
ENSGAGG00000006054-7289.773ENSCHOG00000011359-5779.646Choloepus_hoffmanni
ENSGAGG00000006054-10093.443ENSCPBG00000001404U2AF1L47793.443Chrysemys_picta_bellii
ENSGAGG00000006054-9769.492ENSCSAVG00000000329-5669.492Ciona_savignyi
ENSGAGG00000006054-7476.667ENSCANG00000030826-6166.942Colobus_angolensis_palliatus
ENSGAGG00000006054-7289.773ENSCANG00000008972U2AF1L56879.646Colobus_angolensis_palliatus
ENSGAGG00000006054-10084.426ENSCGRG00001014816Gm493966784.426Cricetulus_griseus_chok1gshd
ENSGAGG00000006054-7786.170ENSCGRG00001006251-5873.438Cricetulus_griseus_chok1gshd
ENSGAGG00000006054-7289.773ENSCGRG00000016812U2af15079.646Cricetulus_griseus_crigri
ENSGAGG00000006054-7388.764ENSCSEG00000001122-5775.194Cynoglossus_semilaevis
ENSGAGG00000006054-8084.694ENSCSEG00000003238-5476.522Cynoglossus_semilaevis
ENSGAGG00000006054-7388.764ENSCVAG00000015263-5774.419Cyprinodon_variegatus
ENSGAGG00000006054-7288.636ENSCVAG00000008190-5775.194Cyprinodon_variegatus
ENSGAGG00000006054-8474.510ENSDNOG00000045879-5866.667Dasypus_novemcinctus
ENSGAGG00000006054-10085.246ENSDNOG00000035856-5585.246Dasypus_novemcinctus
ENSGAGG00000006054-7289.773ENSDORG00000000211U2af16070.000Dipodomys_ordii
ENSGAGG00000006054-10082.787ENSDORG00000009078-6782.787Dipodomys_ordii
ENSGAGG00000006054-8582.692ENSEBUG00000002608-5978.333Eptatretus_burgeri
ENSGAGG00000006054-10084.426ENSEASG00005001205-10062.903Equus_asinus_asinus
ENSGAGG00000006054-10085.246ENSECAG00000017941U2AF1L410063.710Equus_caballus
ENSGAGG00000006054-10085.246ENSFCAG00000006383-6785.246Felis_catus
ENSGAGG00000006054-7289.773ENSFCAG00000003970-6879.646Felis_catus
ENSGAGG00000006054-7289.773ENSFALG00000001997-5871.014Ficedula_albicollis
ENSGAGG00000006054-7289.773ENSFDAG00000014673-6370.000Fukomys_damarensis
ENSGAGG00000006054-7288.636ENSFHEG00000017647-5467.290Fundulus_heteroclitus
ENSGAGG00000006054-7388.764ENSFHEG00000019072-6974.419Fundulus_heteroclitus
ENSGAGG00000006054-7289.773ENSGMOG00000003255u2af15774.615Gadus_morhua
ENSGAGG00000006054-7289.773ENSGALG00000016198U2AF15970.504Gallus_gallus
ENSGAGG00000006054-7288.636ENSGAFG00000021287-5870.536Gambusia_affinis
ENSGAGG00000006054-7388.764ENSGAFG00000018812-5773.846Gambusia_affinis
ENSGAGG00000006054-7288.636ENSGACG00000003454-5175.207Gasterosteus_aculeatus
ENSGAGG00000006054-7488.889ENSGACG00000014605-8471.538Gasterosteus_aculeatus
ENSGAGG00000006054-10076.230ENSGGOG00000016828-6776.230Gorilla_gorilla
ENSGAGG00000006054-7979.167ENSGGOG00000025487-5180.851Gorilla_gorilla
ENSGAGG00000006054-7289.773ENSGGOG00000039004-6879.646Gorilla_gorilla
ENSGAGG00000006054-7388.764ENSHBUG00000002538-5775.969Haplochromis_burtoni
ENSGAGG00000006054-8579.808ENSHBUG00000019658-8279.808Haplochromis_burtoni
ENSGAGG00000006054-8579.808ENSHBUG00000019680u2af18279.808Haplochromis_burtoni
ENSGAGG00000006054-7289.773ENSHGLG00100002483-6173.643Heterocephalus_glaber_male
ENSGAGG00000006054-7288.636ENSHCOG00000013601-5672.519Hippocampus_comes
ENSGAGG00000006054-7289.773ENSHCOG00000006043-5776.744Hippocampus_comes
ENSGAGG00000006054-7288.636ENSIPUG00000013962u2af15775.385Ictalurus_punctatus
ENSGAGG00000006054-9871.901ENSSTOG00000000884-7471.901Ictidomys_tridecemlineatus
ENSGAGG00000006054-7289.773ENSSTOG00000012766-6370.000Ictidomys_tridecemlineatus
ENSGAGG00000006054-10082.787ENSJJAG00000006677-6782.787Jaculus_jaculus
ENSGAGG00000006054-7588.043ENSKMAG00000022082-5988.043Kryptolebias_marmoratus
ENSGAGG00000006054-7289.773ENSKMAG00000000639-5775.969Kryptolebias_marmoratus
ENSGAGG00000006054-7288.636ENSLBEG00000024283-6474.790Labrus_bergylta
ENSGAGG00000006054-7288.636ENSLBEG00000000652-6674.790Labrus_bergylta
ENSGAGG00000006054-7288.636ENSLBEG00000013535-6674.790Labrus_bergylta
ENSGAGG00000006054-7388.764ENSLBEG00000024932-5774.615Labrus_bergylta
ENSGAGG00000006054-7389.888ENSLAFG00000011460-5675.781Loxodonta_africana
ENSGAGG00000006054-10085.246ENSLAFG00000012923-5585.246Loxodonta_africana
ENSGAGG00000006054-10081.148ENSMFAG00000037807-6781.148Macaca_fascicularis
ENSGAGG00000006054-10081.148ENSMMUG00000048190-5581.148Macaca_mulatta
ENSGAGG00000006054-7289.773ENSMMUG00000022769-6879.646Macaca_mulatta
ENSGAGG00000006054-10070.400ENSMNEG00000037977-5470.400Macaca_nemestrina
ENSGAGG00000006054-10081.967ENSMLEG00000004617-6781.967Mandrillus_leucophaeus
ENSGAGG00000006054-7289.773ENSMLEG00000029446-6879.646Mandrillus_leucophaeus
ENSGAGG00000006054-7389.888ENSMAMG00000022001-8476.744Mastacembelus_armatus
ENSGAGG00000006054-7288.636ENSMAMG00000015574-5679.464Mastacembelus_armatus
ENSGAGG00000006054-7388.764ENSMZEG00005017751-5775.969Maylandia_zebra
ENSGAGG00000006054-7289.773ENSMGAG00000014587-5970.504Meleagris_gallopavo
ENSGAGG00000006054-10084.426ENSMAUG00000017381Gm493966784.426Mesocricetus_auratus
ENSGAGG00000006054-10084.426ENSMOCG00000009737U2af1l46784.426Microtus_ochrogaster
ENSGAGG00000006054-7388.764ENSMMOG00000010310-5775.969Mola_mola
ENSGAGG00000006054-10074.101ENSMODG00000014003-5975.540Monodelphis_domestica
ENSGAGG00000006054-7289.773ENSMODG00000029158-5179.646Monodelphis_domestica
ENSGAGG00000006054-7288.636ENSMALG00000007172-6576.316Monopterus_albus
ENSGAGG00000006054-7388.764ENSMALG00000015821-5875.969Monopterus_albus
ENSGAGG00000006054-10084.426MGP_CAROLIEiJ_G0029529U2af1l46784.426Mus_caroli
ENSGAGG00000006054-10084.426ENSMUSG00000078765U2af1l49691.346Mus_musculus
ENSGAGG00000006054-10084.426MGP_PahariEiJ_G0012763U2af1l46784.426Mus_pahari
ENSGAGG00000006054-10084.426MGP_SPRETEiJ_G0030625Gm493966784.426Mus_spretus
ENSGAGG00000006054-10079.699ENSMPUG00000006135-5879.699Mustela_putorius_furo
ENSGAGG00000006054-7289.773ENSMPUG00000009706-7479.646Mustela_putorius_furo
ENSGAGG00000006054-7289.773ENSMLUG00000014756-5970.000Myotis_lucifugus
ENSGAGG00000006054-10084.426ENSNGAG00000015744Gm493966784.426Nannospalax_galili
ENSGAGG00000006054-8875.701ENSNGAG00000009661-6775.701Nannospalax_galili
ENSGAGG00000006054-7287.500ENSNBRG00000006145-5286.170Neolamprologus_brichardi
ENSGAGG00000006054-7388.764ENSNBRG00000003731u2af15775.969Neolamprologus_brichardi
ENSGAGG00000006054-10079.508ENSNLEG00000011333-6779.508Nomascus_leucogenys
ENSGAGG00000006054-7289.773ENSNLEG00000030710-5079.646Nomascus_leucogenys
ENSGAGG00000006054-7287.500ENSONIG00000014309-5076.860Oreochromis_niloticus
ENSGAGG00000006054-7388.764ENSONIG00000001903-5775.969Oreochromis_niloticus
ENSGAGG00000006054-7389.888ENSOANG00000006463-6370.000Ornithorhynchus_anatinus
ENSGAGG00000006054-10083.607ENSOCUG00000013434-5583.607Oryctolagus_cuniculus
ENSGAGG00000006054-7389.888ENSORLG00000006182-5776.154Oryzias_latipes
ENSGAGG00000006054-8380.198ENSORLG00020014086-5780.198Oryzias_latipes_hni
ENSGAGG00000006054-7389.888ENSORLG00015012979-5776.744Oryzias_latipes_hsok
ENSGAGG00000006054-7583.696ENSOMEG00000019531-6570.492Oryzias_melastigma
ENSGAGG00000006054-7389.888ENSOMEG00000009326-5776.744Oryzias_melastigma
ENSGAGG00000006054-7289.773ENSOGAG00000029517-5872.388Otolemur_garnettii
ENSGAGG00000006054-7289.773ENSOARG00000011162-5579.646Ovis_aries
ENSGAGG00000006054-10085.246ENSOARG00000005013-5585.246Ovis_aries
ENSGAGG00000006054-8466.667ENSPPAG00000043414-6466.667Pan_paniscus
ENSGAGG00000006054-7289.773ENSPPAG00000000845U2AF1L55079.646Pan_paniscus
ENSGAGG00000006054-10077.869ENSPPAG00000026285-6777.869Pan_paniscus
ENSGAGG00000006054-7289.773ENSPPRG00000009721U2AF16879.646Panthera_pardus
ENSGAGG00000006054-10085.246ENSPPRG00000002986-6785.246Panthera_pardus
ENSGAGG00000006054-10085.246ENSPTIG00000007065-6785.246Panthera_tigris_altaica
ENSGAGG00000006054-10078.689ENSPTRG00000010860U2AF1L46778.689Pan_troglodytes
ENSGAGG00000006054-7289.773ENSPKIG00000009285u2af16870.968Paramormyrops_kingsleyae
ENSGAGG00000006054-6773.171ENSPKIG00000011206-5664.912Paramormyrops_kingsleyae
ENSGAGG00000006054-7289.773ENSPSIG00000007232-8278.049Pelodiscus_sinensis
ENSGAGG00000006054-7787.234ENSPMGG00000001166U2AF1L55872.932Periophthalmus_magnuspinnatus
ENSGAGG00000006054-10084.426ENSPEMG00000010021U2af1l46784.426Peromyscus_maniculatus_bairdii
ENSGAGG00000006054-10081.967ENSPEMG00000013477-10079.032Peromyscus_maniculatus_bairdii
ENSGAGG00000006054-9883.471ENSPCIG00000015581-8961.157Phascolarctos_cinereus
ENSGAGG00000006054-7588.043ENSPFOG00000013805-5675.969Poecilia_formosa
ENSGAGG00000006054-7388.764ENSPFOG00000011771-5774.615Poecilia_formosa
ENSGAGG00000006054-7388.764ENSPLAG00000024015-6974.615Poecilia_latipinna
ENSGAGG00000006054-7288.636ENSPLAG00000012608-5773.485Poecilia_latipinna
ENSGAGG00000006054-7388.764ENSPMEG00000007991-6974.615Poecilia_mexicana
ENSGAGG00000006054-7288.636ENSPREG00000022679-6876.800Poecilia_reticulata
ENSGAGG00000006054-7388.764ENSPREG00000012953-6974.615Poecilia_reticulata
ENSGAGG00000006054-7389.888ENSPPYG00000011463-6679.646Pongo_abelii
ENSGAGG00000006054-10068.852ENSPCOG00000007736-6568.852Propithecus_coquereli
ENSGAGG00000006054-7289.773ENSPVAG00000016992U2AF1L55079.646Pteropus_vampyrus
ENSGAGG00000006054-7287.500ENSPNYG00000019129-5076.860Pundamilia_nyererei
ENSGAGG00000006054-7388.764ENSPNYG00000023001-5775.969Pundamilia_nyererei
ENSGAGG00000006054-7788.298ENSPNAG00000021267u2af16479.279Pygocentrus_nattereri
ENSGAGG00000006054-10084.426ENSRNOG00000024497U2af1l45584.426Rattus_norvegicus
ENSGAGG00000006054-7289.773ENSRBIG00000028845-5577.869Rhinopithecus_bieti
ENSGAGG00000006054-7373.034ENSRBIG00000038945-6360.145Rhinopithecus_bieti
ENSGAGG00000006054-10075.410ENSRBIG00000043188-6675.410Rhinopithecus_bieti
ENSGAGG00000006054-10075.410ENSRROG00000034680-6675.410Rhinopithecus_roxellana
ENSGAGG00000006054-8466.346ENSRROG00000036788-6558.696Rhinopithecus_roxellana
ENSGAGG00000006054-7289.773ENSRROG00000036664-5079.646Rhinopithecus_roxellana
ENSGAGG00000006054-10073.770ENSSBOG00000032012-5573.770Saimiri_boliviensis_boliviensis
ENSGAGG00000006054-7289.773ENSSBOG00000027084-5079.646Saimiri_boliviensis_boliviensis
ENSGAGG00000006054-7389.888ENSSFOG00015012433-5874.436Scleropages_formosus
ENSGAGG00000006054-7289.773ENSSFOG00015022804u2af15872.794Scleropages_formosus
ENSGAGG00000006054-7288.636ENSSMAG00000013890-5774.615Scophthalmus_maximus
ENSGAGG00000006054-7388.764ENSSMAG00000019026-5481.905Scophthalmus_maximus
ENSGAGG00000006054-7288.636ENSSDUG00000005336-5872.388Seriola_dumerili
ENSGAGG00000006054-7389.888ENSSDUG00000005186-5776.744Seriola_dumerili
ENSGAGG00000006054-7389.888ENSSLDG00000004576-5776.744Seriola_lalandi_dorsalis
ENSGAGG00000006054-7288.636ENSSLDG00000019481-5872.388Seriola_lalandi_dorsalis
ENSGAGG00000006054-7289.773ENSSPUG00000017707U2AF1L56579.646Sphenodon_punctatus
ENSGAGG00000006054-7389.888ENSSPAG00000011333-5775.758Stegastes_partitus
ENSGAGG00000006054-7288.636ENSSPAG00000005712-5871.324Stegastes_partitus
ENSGAGG00000006054-10085.246ENSSSCG00000035162-5585.246Sus_scrofa
ENSGAGG00000006054-7289.773ENSTGUG00000005826U2AF15970.504Taeniopygia_guttata
ENSGAGG00000006054-6082.192ENSTRUG00000010538-5869.725Takifugu_rubripes
ENSGAGG00000006054-7487.778ENSTNIG00000013914-5872.932Tetraodon_nigroviridis
ENSGAGG00000006054-7389.888ENSTNIG00000008311-5777.519Tetraodon_nigroviridis
ENSGAGG00000006054-7289.773ENSTBEG00000000453-6370.000Tupaia_belangeri
ENSGAGG00000006054-10085.246ENSUAMG00000020697-5585.246Ursus_americanus
ENSGAGG00000006054-6239.474ENSUAMG00000016637ZRSR25032.886Ursus_americanus
ENSGAGG00000006054-6239.474ENSUMAG00000008698ZRSR25032.886Ursus_maritimus
ENSGAGG00000006054-10085.246ENSUMAG00000020355-6785.246Ursus_maritimus
ENSGAGG00000006054-7089.535ENSVPAG00000002856-6369.286Vicugna_pacos
ENSGAGG00000006054-10085.246ENSVVUG00000015000-5585.246Vulpes_vulpes
ENSGAGG00000006054-6182.432ENSXCOG00000020559-5968.696Xiphophorus_couchianus
ENSGAGG00000006054-6381.818ENSXCOG00000018906-5669.307Xiphophorus_couchianus
ENSGAGG00000006054-7388.764ENSXMAG00000008127-5774.615Xiphophorus_maculatus

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