EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000006508 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: VARS2
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 7381 bases
Position: chrPPEB01015846.1:482-7862
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000008205	tRNA-synt_1	PF00133.22	2.2e-92	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000009446	-	1947	-	ENSGAGP00000008205	648 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000006508's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000006508's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000006508	-	91	64.669	ENSG00000204394	VARS	100	49.438	Homo_sapiens
ENSGAGG00000006508	-	91	61.881	ENSAPOG00000020921	vars	51	59.657	Acanthochromis_polyacanthus
ENSGAGG00000006508	-	91	61.881	ENSAPOG00000020691	vars	51	59.657	Acanthochromis_polyacanthus
ENSGAGG00000006508	-	91	64.038	ENSAMEG00000006417	VARS	50	64.511	Ailuropoda_melanoleuca
ENSGAGG00000006508	-	91	70.781	ENSACAG00000029133	-	56	71.094	Anolis_carolinensis
ENSGAGG00000006508	-	91	64.826	ENSANAG00000015453	VARS	50	65.300	Aotus_nancymaae
ENSGAGG00000006508	-	91	64.297	ENSBTAG00000005631	VARS	50	64.771	Bos_taurus
ENSGAGG00000006508	-	91	64.511	ENSCJAG00000002604	VARS	50	64.984	Callithrix_jacchus
ENSGAGG00000006508	-	91	64.771	ENSCAFG00000000636	VARS	50	65.245	Canis_familiaris
ENSGAGG00000006508	-	91	64.929	ENSCAFG00020020790	VARS	51	65.403	Canis_lupus_dingo
ENSGAGG00000006508	-	91	66.505	ENSCHIG00000011008	VARS	50	65.087	Capra_hircus
ENSGAGG00000006508	-	91	64.297	ENSTSYG00000001567	VARS	50	64.771	Carlito_syrichta
ENSGAGG00000006508	-	91	63.911	ENSCPOG00000000870	VARS	50	64.455	Cavia_porcellus
ENSGAGG00000006508	-	91	64.984	ENSCCAG00000035656	VARS	50	65.457	Cebus_capucinus
ENSGAGG00000006508	-	91	64.196	ENSCATG00000022394	VARS	50	64.826	Cercocebus_atys
ENSGAGG00000006508	-	91	64.511	ENSCSAG00000008784	VARS	50	65.142	Chlorocebus_sabaeus
ENSGAGG00000006508	-	91	64.511	ENSCANG00000033570	VARS	50	65.142	Colobus_angolensis_palliatus
ENSGAGG00000006508	-	91	64.139	ENSCGRG00001005686	Vars	50	64.771	Cricetulus_griseus_chok1gshd
ENSGAGG00000006508	-	91	60.125	ENSCVAG00000022398	vars	50	58.255	Cyprinodon_variegatus
ENSGAGG00000006508	-	91	59.688	ENSDARG00000044575	vars	50	59.535	Danio_rerio
ENSGAGG00000006508	-	91	64.929	ENSEASG00005015673	VARS	50	65.403	Equus_asinus_asinus
ENSGAGG00000006508	-	91	64.826	ENSECAG00000014620	VARS	50	65.142	Equus_caballus
ENSGAGG00000006508	-	91	64.297	ENSFCAG00000004510	VARS	50	65.245	Felis_catus
ENSGAGG00000006508	-	77	66.917	ENSFDAG00000011401	VARS	52	67.293	Fukomys_damarensis
ENSGAGG00000006508	-	91	63.651	ENSFHEG00000010672	vars	50	57.788	Fundulus_heteroclitus
ENSGAGG00000006508	-	91	59.531	ENSGAFG00000021630	vars	50	57.500	Gambusia_affinis
ENSGAGG00000006508	-	91	64.511	ENSGGOG00000011364	VARS	50	65.142	Gorilla_gorilla
ENSGAGG00000006508	-	91	63.333	ENSHGLG00000011646	VARS	50	63.810	Heterocephalus_glaber_female
ENSGAGG00000006508	-	91	60.461	ENSHCOG00000012198	vars	50	59.938	Hippocampus_comes
ENSGAGG00000006508	-	91	62.932	ENSIPUG00000005218	vars	50	58.216	Ictalurus_punctatus
ENSGAGG00000006508	-	91	63.880	ENSSTOG00000013112	VARS	50	64.511	Ictidomys_tridecemlineatus
ENSGAGG00000006508	-	91	54.634	ENSJJAG00000015343	-	50	54.870	Jaculus_jaculus
ENSGAGG00000006508	-	91	64.025	ENSJJAG00000019749	-	50	64.501	Jaculus_jaculus
ENSGAGG00000006508	-	96	59.314	ENSLACG00000015232	VARS	55	59.613	Latimeria_chalumnae
ENSGAGG00000006508	-	91	63.924	ENSLAFG00000023090	VARS	50	64.082	Loxodonta_africana
ENSGAGG00000006508	-	91	64.196	ENSMFAG00000001032	VARS	50	64.826	Macaca_fascicularis
ENSGAGG00000006508	-	91	64.196	ENSMMUG00000006828	VARS	50	64.826	Macaca_mulatta
ENSGAGG00000006508	-	91	64.038	ENSMNEG00000042072	VARS	50	64.669	Macaca_nemestrina
ENSGAGG00000006508	-	91	64.196	ENSMLEG00000039307	VARS	50	64.826	Mandrillus_leucophaeus
ENSGAGG00000006508	-	91	62.086	ENSMAMG00000003949	vars	50	60.063	Mastacembelus_armatus
ENSGAGG00000006508	-	91	64.613	ENSMAUG00000006715	Vars	50	65.245	Mesocricetus_auratus
ENSGAGG00000006508	-	91	63.823	ENSMICG00000003548	VARS	50	64.613	Microcebus_murinus
ENSGAGG00000006508	-	91	64.070	ENSMODG00000015204	-	50	64.297	Monodelphis_domestica
ENSGAGG00000006508	-	91	60.645	ENSMALG00000022532	vars	50	56.610	Monopterus_albus
ENSGAGG00000006508	-	91	64.399	MGP_CAROLIEiJ_G0021491	Vars	50	64.557	Mus_caroli
ENSGAGG00000006508	-	91	64.557	ENSMUSG00000007029	Vars	50	64.715	Mus_musculus
ENSGAGG00000006508	-	91	64.241	MGP_PahariEiJ_G0020486	Vars	50	64.399	Mus_pahari
ENSGAGG00000006508	-	91	64.557	MGP_SPRETEiJ_G0022396	Vars	50	64.715	Mus_spretus
ENSGAGG00000006508	-	91	64.613	ENSMPUG00000010821	VARS	50	65.087	Mustela_putorius_furo
ENSGAGG00000006508	-	91	63.565	ENSMLUG00000013126	VARS	64	64.353	Myotis_lucifugus
ENSGAGG00000006508	-	91	64.490	ENSNGAG00000012151	Vars	50	64.771	Nannospalax_galili
ENSGAGG00000006508	-	91	62.914	ENSNBRG00000020520	vars	50	59.813	Neolamprologus_brichardi
ENSGAGG00000006508	-	91	64.511	ENSNLEG00000006351	VARS	50	64.984	Nomascus_leucogenys
ENSGAGG00000006508	-	91	64.139	ENSOPRG00000003607	VARS	50	64.771	Ochotona_princeps
ENSGAGG00000006508	-	91	62.720	ENSODEG00000017681	VARS	50	64.038	Octodon_degus
ENSGAGG00000006508	-	91	65.342	ENSOANG00000005400	VARS	62	65.501	Ornithorhynchus_anatinus
ENSGAGG00000006508	-	91	62.580	ENSOCUG00000022463	VARS	50	62.580	Oryctolagus_cuniculus
ENSGAGG00000006508	-	91	60.092	ENSORLG00000013063	vars	50	58.257	Oryzias_latipes
ENSGAGG00000006508	-	91	60.340	ENSORLG00020003504	vars	50	60.648	Oryzias_latipes_hni
ENSGAGG00000006508	-	91	60.742	ENSORLG00015009001	vars	50	61.051	Oryzias_latipes_hsok
ENSGAGG00000006508	-	91	60.124	ENSOMEG00000015016	vars	50	58.578	Oryzias_melastigma
ENSGAGG00000006508	-	91	63.981	ENSOGAG00000007515	VARS	50	64.455	Otolemur_garnettii
ENSGAGG00000006508	-	85	65.812	ENSOARG00000004625	-	85	66.325	Ovis_aries
ENSGAGG00000006508	-	91	64.826	ENSPPAG00000034012	VARS	50	65.300	Pan_paniscus
ENSGAGG00000006508	-	91	64.297	ENSPPRG00000014855	VARS	50	65.245	Panthera_pardus
ENSGAGG00000006508	-	91	64.826	ENSPTRG00000017985	VARS	50	65.300	Pan_troglodytes
ENSGAGG00000006508	-	91	61.129	ENSPANG00000014565	VARS	50	61.215	Papio_anubis
ENSGAGG00000006508	-	91	57.829	ENSPKIG00000016304	vars	50	55.039	Paramormyrops_kingsleyae
ENSGAGG00000006508	-	91	64.455	ENSPEMG00000006639	Vars	50	65.087	Peromyscus_maniculatus_bairdii
ENSGAGG00000006508	-	91	63.550	ENSPCIG00000018553	VARS	50	63.823	Phascolarctos_cinereus
ENSGAGG00000006508	-	91	60.156	ENSPFOG00000015690	vars	50	57.969	Poecilia_formosa
ENSGAGG00000006508	-	91	61.066	ENSPLAG00000009590	vars	50	57.969	Poecilia_latipinna
ENSGAGG00000006508	-	91	60.156	ENSPMEG00000004708	vars	50	57.969	Poecilia_mexicana
ENSGAGG00000006508	-	91	64.196	ENSPPYG00000016460	VARS	50	64.826	Pongo_abelii
ENSGAGG00000006508	-	91	64.511	ENSPCOG00000010942	VARS	50	64.826	Propithecus_coquereli
ENSGAGG00000006508	-	91	59.813	ENSPNYG00000022511	vars	50	60.125	Pundamilia_nyererei
ENSGAGG00000006508	-	91	59.813	ENSPNAG00000020962	vars	50	58.411	Pygocentrus_nattereri
ENSGAGG00000006508	-	91	64.297	ENSRNOG00000000867	Vars	50	64.929	Rattus_norvegicus
ENSGAGG00000006508	-	91	64.353	ENSRBIG00000041669	VARS	50	64.984	Rhinopithecus_bieti
ENSGAGG00000006508	-	91	64.353	ENSRROG00000045490	VARS	50	64.984	Rhinopithecus_roxellana
ENSGAGG00000006508	-	91	64.511	ENSSBOG00000035402	VARS	50	64.826	Saimiri_boliviensis_boliviensis
ENSGAGG00000006508	-	91	59.091	ENSSHAG00000006937	VARS	50	56.508	Sarcophilus_harrisii
ENSGAGG00000006508	-	91	58.787	ENSSMAG00000009596	vars	50	59.253	Scophthalmus_maximus
ENSGAGG00000006508	-	91	59.657	ENSSDUG00000014177	vars	50	59.813	Seriola_dumerili
ENSGAGG00000006508	-	91	59.346	ENSSLDG00000025316	vars	50	59.502	Seriola_lalandi_dorsalis
ENSGAGG00000006508	-	91	61.438	ENSSPAG00000017068	vars	50	60.031	Stegastes_partitus
ENSGAGG00000006508	-	91	64.826	ENSSSCG00000038950	VARS	50	65.142	Sus_scrofa
ENSGAGG00000006508	-	91	61.564	ENSTRUG00000012307	vars	59	59.091	Takifugu_rubripes
ENSGAGG00000006508	-	94	63.293	ENSUAMG00000010424	VARS	53	62.725	Ursus_americanus
ENSGAGG00000006508	-	91	64.724	ENSUMAG00000013486	VARS	54	64.724	Ursus_maritimus
ENSGAGG00000006508	-	91	66.881	ENSVVUG00000021323	VARS	51	66.026	Vulpes_vulpes
ENSGAGG00000006508	-	91	59.375	ENSXMAG00000010927	vars	50	57.500	Xiphophorus_maculatus