EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000006624 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 4875 bases
Position: chrPPEB01013615.1:7800-12674
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000008336	APOBEC_N	PF08210.11	3.3e-30	1	1
ENSGAGP00000008336	APOBEC_C	PF05240.14	6.6e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000009595	-	2300	-	ENSGAGP00000008336	276 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000006624's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000006624's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000006624	-	66	87.432	ENSGAGG00000021744	-	72	87.432
ENSGAGG00000006624	-	70	68.367	ENSGAGG00000021745	-	72	70.408
ENSGAGG00000006624	-	63	53.143	ENSGAGG00000004947	-	87	53.143
ENSGAGG00000006624	-	65	48.333	ENSGAGG00000011837	-	89	49.194

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000006624	-	70	45.000	ENSG00000111701	APOBEC1	83	45.000	Homo_sapiens
ENSGAGG00000006624	-	63	47.429	ENSAMEG00000007098	APOBEC1	74	47.429	Ailuropoda_melanoleuca
ENSGAGG00000006624	-	65	43.407	ENSACAG00000028578	-	98	43.407	Anolis_carolinensis
ENSGAGG00000006624	-	62	47.368	ENSANAG00000027743	APOBEC1	69	47.368	Aotus_nancymaae
ENSGAGG00000006624	-	62	46.199	ENSBTAG00000014683	APOBEC1	72	46.199	Bos_taurus
ENSGAGG00000006624	-	62	48.538	ENSCJAG00000005398	APOBEC1	77	48.538	Callithrix_jacchus
ENSGAGG00000006624	-	62	47.368	ENSCAFG00000013901	APOBEC1	72	47.368	Canis_familiaris
ENSGAGG00000006624	-	62	47.953	ENSCAFG00020003511	APOBEC1	71	47.953	Canis_lupus_dingo
ENSGAGG00000006624	-	63	45.604	ENSCHIG00000011898	APOBEC1	78	42.623	Capra_hircus
ENSGAGG00000006624	-	62	43.860	ENSCAPG00000015882	-	79	43.860	Cavia_aperea
ENSGAGG00000006624	-	62	45.614	ENSCPOG00000033068	APOBEC1	72	45.614	Cavia_porcellus
ENSGAGG00000006624	-	62	49.123	ENSCCAG00000022258	APOBEC1	72	49.123	Cebus_capucinus
ENSGAGG00000006624	-	66	47.368	ENSCATG00000021613	APOBEC1	75	47.368	Cercocebus_atys
ENSGAGG00000006624	-	62	43.860	ENSCLAG00000014645	APOBEC1	74	43.860	Chinchilla_lanigera
ENSGAGG00000006624	-	59	45.882	ENSCSAG00000009817	APOBEC1	87	45.882	Chlorocebus_sabaeus
ENSGAGG00000006624	-	66	79.348	ENSCPBG00000014328	-	81	79.348	Chrysemys_picta_bellii
ENSGAGG00000006624	-	63	90.230	ENSCPBG00000014327	-	65	90.230	Chrysemys_picta_bellii
ENSGAGG00000006624	-	68	45.263	ENSCPBG00000014331	-	81	43.716	Chrysemys_picta_bellii
ENSGAGG00000006624	-	67	48.387	ENSCPBG00000014335	-	75	48.387	Chrysemys_picta_bellii
ENSGAGG00000006624	-	68	90.000	ENSCPBG00000017398	-	84	90.000	Chrysemys_picta_bellii
ENSGAGG00000006624	-	66	47.368	ENSCANG00000038359	APOBEC1	81	47.368	Colobus_angolensis_palliatus
ENSGAGG00000006624	-	62	46.199	ENSCGRG00001011130	Apobec1	74	46.199	Cricetulus_griseus_chok1gshd
ENSGAGG00000006624	-	62	46.199	ENSCGRG00000008644	Apobec1	74	46.199	Cricetulus_griseus_crigri
ENSGAGG00000006624	-	58	47.205	ENSDNOG00000010926	APOBEC1	68	47.205	Dasypus_novemcinctus
ENSGAGG00000006624	-	62	43.275	ENSDORG00000023717	Apobec1	80	43.275	Dipodomys_ordii
ENSGAGG00000006624	-	62	48.837	ENSETEG00000004867	APOBEC1	72	48.837	Echinops_telfairi
ENSGAGG00000006624	-	68	44.385	ENSEASG00005015951	APOBEC1	78	44.385	Equus_asinus_asinus
ENSGAGG00000006624	-	62	42.690	ENSEEUG00000009112	-	76	42.690	Erinaceus_europaeus
ENSGAGG00000006624	-	62	46.784	ENSFCAG00000009350	APOBEC1	72	46.784	Felis_catus
ENSGAGG00000006624	-	74	40.116	ENSFALG00000007257	-	88	40.116	Ficedula_albicollis
ENSGAGG00000006624	-	58	43.396	ENSFDAG00000018470	APOBEC1	76	43.396	Fukomys_damarensis
ENSGAGG00000006624	-	62	44.444	ENSHGLG00000001495	APOBEC1	72	44.444	Heterocephalus_glaber_female
ENSGAGG00000006624	-	62	44.444	ENSHGLG00100002187	APOBEC1	72	44.444	Heterocephalus_glaber_male
ENSGAGG00000006624	-	62	45.930	ENSJJAG00000022108	Apobec1	74	45.930	Jaculus_jaculus
ENSGAGG00000006624	-	58	47.205	ENSLAFG00000030837	APOBEC1	72	47.205	Loxodonta_africana
ENSGAGG00000006624	-	70	46.000	ENSMFAG00000000277	APOBEC1	86	47.024	Macaca_fascicularis
ENSGAGG00000006624	-	70	46.000	ENSMNEG00000029670	APOBEC1	83	46.000	Macaca_nemestrina
ENSGAGG00000006624	-	66	47.368	ENSMLEG00000036301	APOBEC1	79	47.368	Mandrillus_leucophaeus
ENSGAGG00000006624	-	62	45.294	ENSMAUG00000022167	Apobec1	76	45.294	Mesocricetus_auratus
ENSGAGG00000006624	-	63	45.143	ENSMICG00000043645	APOBEC1	74	45.614	Microcebus_murinus
ENSGAGG00000006624	-	62	46.784	ENSMODG00000018004	APOBEC1	72	46.784	Monodelphis_domestica
ENSGAGG00000006624	-	66	42.077	ENSMUSG00000040613	Apobec1	86	40.000	Mus_musculus
ENSGAGG00000006624	-	66	42.623	MGP_PahariEiJ_G0022580	-	96	39.316	Mus_pahari
ENSGAGG00000006624	-	66	42.077	MGP_SPRETEiJ_G0029857	Apobec1	86	40.000	Mus_spretus
ENSGAGG00000006624	-	58	48.447	ENSMPUG00000017532	APOBEC1	68	48.447	Mustela_putorius_furo
ENSGAGG00000006624	-	62	46.199	ENSNGAG00000022607	Apobec1	74	46.199	Nannospalax_galili
ENSGAGG00000006624	-	66	46.842	ENSNLEG00000005342	APOBEC1	79	46.842	Nomascus_leucogenys
ENSGAGG00000006624	-	62	44.444	ENSMEUG00000013406	APOBEC1	72	44.444	Notamacropus_eugenii
ENSGAGG00000006624	-	63	42.286	ENSOPRG00000009508	-	96	42.286	Ochotona_princeps
ENSGAGG00000006624	-	58	45.963	ENSOCUG00000025736	APOBEC1	60	45.963	Oryctolagus_cuniculus
ENSGAGG00000006624	-	65	45.652	ENSOGAG00000026415	APOBEC1	78	45.652	Otolemur_garnettii
ENSGAGG00000006624	-	63	45.604	ENSOARG00000002072	APOBEC1	76	45.604	Ovis_aries
ENSGAGG00000006624	-	70	42.000	ENSPPAG00000027657	APOBEC1	82	42.000	Pan_paniscus
ENSGAGG00000006624	-	62	46.199	ENSPPRG00000012182	APOBEC1	72	46.199	Panthera_pardus
ENSGAGG00000006624	-	62	46.199	ENSPTIG00000020280	APOBEC1	72	46.199	Panthera_tigris_altaica
ENSGAGG00000006624	-	70	45.000	ENSPTRG00000004614	APOBEC1	83	45.000	Pan_troglodytes
ENSGAGG00000006624	-	66	47.368	ENSPANG00000021027	APOBEC1	79	47.368	Papio_anubis
ENSGAGG00000006624	-	73	82.587	ENSPSIG00000012568	-	87	82.587	Pelodiscus_sinensis
ENSGAGG00000006624	-	62	46.199	ENSPEMG00000023841	Apobec1	74	46.199	Peromyscus_maniculatus_bairdii
ENSGAGG00000006624	-	62	45.614	ENSPCIG00000023973	APOBEC1	72	45.614	Phascolarctos_cinereus
ENSGAGG00000006624	-	70	45.000	ENSPPYG00000004228	APOBEC1	79	45.000	Pongo_abelii
ENSGAGG00000006624	-	58	47.826	ENSPCAG00000008733	APOBEC1	86	47.826	Procavia_capensis
ENSGAGG00000006624	-	63	46.286	ENSPCOG00000013957	APOBEC1	77	46.286	Propithecus_coquereli
ENSGAGG00000006624	-	66	41.530	ENSRNOG00000015411	Apobec1	79	41.530	Rattus_norvegicus
ENSGAGG00000006624	-	70	46.500	ENSRBIG00000031161	APOBEC1	83	46.500	Rhinopithecus_bieti
ENSGAGG00000006624	-	62	49.708	ENSRROG00000033576	APOBEC1	72	51.799	Rhinopithecus_roxellana
ENSGAGG00000006624	-	62	47.953	ENSSBOG00000030587	APOBEC1	96	47.953	Saimiri_boliviensis_boliviensis
ENSGAGG00000006624	-	62	48.538	ENSSHAG00000008925	APOBEC1	75	48.538	Sarcophilus_harrisii
ENSGAGG00000006624	-	62	45.614	ENSSARG00000000032	-	99	45.614	Sorex_araneus
ENSGAGG00000006624	-	65	42.857	ENSSPUG00000009044	-	70	42.857	Sphenodon_punctatus
ENSGAGG00000006624	-	64	43.716	ENSSSCG00000000668	APOBEC1	77	43.716	Sus_scrofa
ENSGAGG00000006624	-	51	47.183	ENSTGUG00000013118	-	97	47.183	Taeniopygia_guttata
ENSGAGG00000006624	-	62	45.614	ENSTBEG00000010043	APOBEC1	72	45.614	Tupaia_belangeri
ENSGAGG00000006624	-	62	43.275	ENSTTRG00000014015	APOBEC1	91	43.275	Tursiops_truncatus
ENSGAGG00000006624	-	72	43.415	ENSUAMG00000011636	APOBEC1	81	43.415	Ursus_americanus
ENSGAGG00000006624	-	63	46.286	ENSUMAG00000016552	APOBEC1	71	46.286	Ursus_maritimus
ENSGAGG00000006624	-	69	39.614	ENSVPAG00000001343	APOBEC1	87	39.614	Vicugna_pacos
ENSGAGG00000006624	-	62	48.538	ENSVVUG00000010522	APOBEC1	72	48.538	Vulpes_vulpes