EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000006666 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 14660 bases
Position: chrPPEB01013647.1:3863-18522
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000008385	eIF-3c_N	PF05470.12	1.7e-238	1	2
ENSGAGP00000008385	eIF-3c_N	PF05470.12	1.7e-238	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000009654	-	2788	-	ENSGAGP00000008385	838 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000006666's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000006666's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000006666	-	100	83.825	ENSG00000184110	EIF3C	100	97.468	Homo_sapiens
ENSGAGG00000006666	-	100	83.844	ENSG00000205609	EIF3CL	92	83.608	Homo_sapiens
ENSGAGG00000006666	-	100	75.087	ENSAPOG00000024092	eif3c	84	85.318	Acanthochromis_polyacanthus
ENSGAGG00000006666	-	100	83.825	ENSAMEG00000015454	-	92	83.707	Ailuropoda_melanoleuca
ENSGAGG00000006666	-	100	73.540	ENSACIG00000015082	eif3c	86	84.793	Amphilophus_citrinellus
ENSGAGG00000006666	-	100	75.319	ENSAOCG00000021466	eif3c	86	84.983	Amphiprion_ocellaris
ENSGAGG00000006666	-	100	75.319	ENSAPEG00000010521	eif3c	86	84.983	Amphiprion_percula
ENSGAGG00000006666	-	100	75.203	ENSATEG00000019001	eif3c	93	75.319	Anabas_testudineus
ENSGAGG00000006666	-	100	89.442	ENSACAG00000005937	-	92	89.087	Anolis_carolinensis
ENSGAGG00000006666	-	100	83.825	ENSANAG00000020640	-	92	83.707	Aotus_nancymaae
ENSGAGG00000006666	-	83	84.768	ENSACLG00000009347	eif3c	81	84.768	Astatotilapia_calliptera
ENSGAGG00000006666	-	83	82.353	ENSACLG00000009322	eif3c	83	82.353	Astatotilapia_calliptera
ENSGAGG00000006666	-	99	76.010	ENSAMXG00000020949	eif3c	92	75.347	Astyanax_mexicanus
ENSGAGG00000006666	-	100	82.999	ENSBTAG00000006543	EIF3CL	92	83.353	Bos_taurus
ENSGAGG00000006666	-	99	42.007	WBGene00001226	eif-3.C	67	45.746	Caenorhabditis_elegans
ENSGAGG00000006666	-	100	83.943	ENSCJAG00000006341	-	100	81.471	Callithrix_jacchus
ENSGAGG00000006666	-	100	83.943	ENSCAFG00000017143	-	92	83.353	Canis_familiaris
ENSGAGG00000006666	-	100	83.943	ENSCAFG00020017587	-	92	83.825	Canis_lupus_dingo
ENSGAGG00000006666	-	100	83.353	ENSCHIG00000024795	-	92	83.589	Capra_hircus
ENSGAGG00000006666	-	100	83.825	ENSTSYG00000003486	-	92	83.707	Carlito_syrichta
ENSGAGG00000006666	-	100	75.558	ENSCAPG00000015887	-	96	75.793	Cavia_aperea
ENSGAGG00000006666	-	100	83.825	ENSCPOG00000007533	-	92	83.707	Cavia_porcellus
ENSGAGG00000006666	-	100	83.235	ENSCCAG00000034928	-	92	82.999	Cebus_capucinus
ENSGAGG00000006666	-	99	79.433	ENSCCAG00000027724	-	92	78.487	Cebus_capucinus
ENSGAGG00000006666	-	99	72.156	ENSCCAG00000029099	-	92	70.498	Cebus_capucinus
ENSGAGG00000006666	-	100	83.825	ENSCATG00000032673	-	92	83.707	Cercocebus_atys
ENSGAGG00000006666	-	100	84.061	ENSCLAG00000011094	-	92	84.298	Chinchilla_lanigera
ENSGAGG00000006666	-	100	83.825	ENSCSAG00000006297	-	92	83.707	Chlorocebus_sabaeus
ENSGAGG00000006666	-	59	74.131	ENSCHOG00000003120	-	87	74.131	Choloepus_hoffmanni
ENSGAGG00000006666	-	79	95.238	ENSCPBG00000012407	-	89	95.205	Chrysemys_picta_bellii
ENSGAGG00000006666	-	84	55.519	ENSCSAVG00000006744	-	89	56.942	Ciona_savignyi
ENSGAGG00000006666	-	100	83.825	ENSCANG00000033626	-	92	83.707	Colobus_angolensis_palliatus
ENSGAGG00000006666	-	100	82.388	ENSCGRG00001015265	EIF3C	92	83.215	Cricetulus_griseus_chok1gshd
ENSGAGG00000006666	-	100	75.326	ENSCSEG00000017770	eif3c	93	75.089	Cynoglossus_semilaevis
ENSGAGG00000006666	-	100	74.564	ENSCVAG00000005402	eif3c	93	74.332	Cyprinodon_variegatus
ENSGAGG00000006666	-	100	75.553	ENSDARG00000016443	eif3c	92	75.437	Danio_rerio
ENSGAGG00000006666	-	100	83.962	ENSDNOG00000031497	-	92	83.943	Dasypus_novemcinctus
ENSGAGG00000006666	-	100	83.707	ENSDORG00000016471	Eif3c	92	83.589	Dipodomys_ordii
ENSGAGG00000006666	-	98	50.907	FBgn0034258	eIF3c	65	56.169	Drosophila_melanogaster
ENSGAGG00000006666	-	91	88.584	ENSETEG00000013527	-	84	88.584	Echinops_telfairi
ENSGAGG00000006666	-	99	63.127	ENSEBUG00000001629	eif3c	74	67.804	Eptatretus_burgeri
ENSGAGG00000006666	-	100	83.825	ENSECAG00000008746	-	92	83.707	Equus_caballus
ENSGAGG00000006666	-	68	59.895	ENSEEUG00000000726	-	64	59.593	Erinaceus_europaeus
ENSGAGG00000006666	-	90	81.699	ENSEEUG00000006148	-	95	82.614	Erinaceus_europaeus
ENSGAGG00000006666	-	100	75.733	ENSELUG00000022257	eif3c	83	84.692	Esox_lucius
ENSGAGG00000006666	-	100	83.825	ENSFCAG00000015782	-	92	83.589	Felis_catus
ENSGAGG00000006666	-	100	84.179	ENSFDAG00000003588	-	92	84.061	Fukomys_damarensis
ENSGAGG00000006666	-	100	75.447	ENSFHEG00000014154	EIF3C	93	74.855	Fundulus_heteroclitus
ENSGAGG00000006666	-	97	74.601	ENSGMOG00000016885	eif3c	92	74.541	Gadus_morhua
ENSGAGG00000006666	-	96	77.475	ENSGACG00000007652	eif3c	92	76.038	Gasterosteus_aculeatus
ENSGAGG00000006666	-	100	83.707	ENSGGOG00000026919	EIF3C	96	83.589	Gorilla_gorilla
ENSGAGG00000006666	-	53	86.486	ENSGGOG00000022677	-	92	86.486	Gorilla_gorilla
ENSGAGG00000006666	-	100	84.179	ENSHGLG00000011445	EIF3C	92	84.061	Heterocephalus_glaber_female
ENSGAGG00000006666	-	100	84.179	ENSHGLG00100000217	EIF3C	92	84.061	Heterocephalus_glaber_male
ENSGAGG00000006666	-	100	74.302	ENSHCOG00000019694	eif3c	93	73.721	Hippocampus_comes
ENSGAGG00000006666	-	99	75.708	ENSIPUG00000016878	eif3c	91	75.354	Ictalurus_punctatus
ENSGAGG00000006666	-	100	83.471	ENSSTOG00000021278	-	92	83.353	Ictidomys_tridecemlineatus
ENSGAGG00000006666	-	100	83.353	ENSJJAG00000012722	Eif3c	92	83.235	Jaculus_jaculus
ENSGAGG00000006666	-	98	76.970	ENSKMAG00000021662	eif3c	93	73.448	Kryptolebias_marmoratus
ENSGAGG00000006666	-	98	77.091	ENSLBEG00000023370	eif3c	93	74.505	Labrus_bergylta
ENSGAGG00000006666	-	98	79.348	ENSLACG00000000770	eif3c	92	80.047	Latimeria_chalumnae
ENSGAGG00000006666	-	100	83.471	ENSLAFG00000027426	-	92	83.353	Loxodonta_africana
ENSGAGG00000006666	-	100	83.825	ENSMFAG00000041930	-	92	83.707	Macaca_fascicularis
ENSGAGG00000006666	-	100	83.825	ENSMMUG00000011798	-	92	83.707	Macaca_mulatta
ENSGAGG00000006666	-	100	83.825	ENSMNEG00000023915	-	92	83.707	Macaca_nemestrina
ENSGAGG00000006666	-	100	83.825	ENSMLEG00000027529	-	92	83.707	Mandrillus_leucophaeus
ENSGAGG00000006666	-	100	75.463	ENSMAMG00000012512	eif3c	93	75.058	Mastacembelus_armatus
ENSGAGG00000006666	-	100	71.905	ENSMZEG00005013699	eif3c	85	84.768	Maylandia_zebra
ENSGAGG00000006666	-	83	82.516	ENSMZEG00005013685	eif3c	83	82.516	Maylandia_zebra
ENSGAGG00000006666	-	100	82.506	ENSMAUG00000010621	Eif3c	92	83.333	Mesocricetus_auratus
ENSGAGG00000006666	-	100	84.061	ENSMICG00000036748	-	92	83.707	Microcebus_murinus
ENSGAGG00000006666	-	100	83.097	ENSMOCG00000004204	Eif3c	93	83.333	Microtus_ochrogaster
ENSGAGG00000006666	-	100	72.143	ENSMMOG00000001572	eif3c	86	83.168	Mola_mola
ENSGAGG00000006666	-	100	84.497	ENSMODG00000015579	-	92	85.444	Monodelphis_domestica
ENSGAGG00000006666	-	84	84.943	ENSMALG00000008907	eif3c	85	84.967	Monopterus_albus
ENSGAGG00000006666	-	100	82.742	MGP_CAROLIEiJ_G0030451	Eif3c	92	82.388	Mus_caroli
ENSGAGG00000006666	-	100	82.506	ENSMUSG00000030738	Eif3c	92	82.388	Mus_musculus
ENSGAGG00000006666	-	100	81.442	MGP_PahariEiJ_G0013661	Eif3c	92	82.033	Mus_pahari
ENSGAGG00000006666	-	100	82.742	MGP_SPRETEiJ_G0031565	Eif3c	92	82.388	Mus_spretus
ENSGAGG00000006666	-	100	83.825	ENSMPUG00000012732	-	96	83.707	Mustela_putorius_furo
ENSGAGG00000006666	-	100	83.117	ENSMLUG00000015558	-	92	82.881	Myotis_lucifugus
ENSGAGG00000006666	-	100	83.589	ENSNGAG00000007177	-	92	83.471	Nannospalax_galili
ENSGAGG00000006666	-	94	59.898	ENSNGAG00000010901	-	87	69.444	Nannospalax_galili
ENSGAGG00000006666	-	100	72.177	ENSNLEG00000001425	-	92	69.114	Nomascus_leucogenys
ENSGAGG00000006666	-	99	70.972	ENSMEUG00000009939	-	93	70.853	Notamacropus_eugenii
ENSGAGG00000006666	-	93	59.559	ENSMEUG00000005317	-	92	68.687	Notamacropus_eugenii
ENSGAGG00000006666	-	100	82.409	ENSOPRG00000000931	-	92	83.117	Ochotona_princeps
ENSGAGG00000006666	-	100	83.353	ENSODEG00000013508	-	92	84.179	Octodon_degus
ENSGAGG00000006666	-	72	63.383	ENSONIG00000011434	eif3c	99	63.383	Oreochromis_niloticus
ENSGAGG00000006666	-	100	80.836	ENSOANG00000011410	-	92	81.765	Ornithorhynchus_anatinus
ENSGAGG00000006666	-	100	83.825	ENSOCUG00000022489	-	92	83.707	Oryctolagus_cuniculus
ENSGAGG00000006666	-	98	76.000	ENSORLG00000006318	eif3c	88	74.882	Oryzias_latipes
ENSGAGG00000006666	-	100	72.831	ENSORLG00020015713	eif3c	93	72.686	Oryzias_latipes_hni
ENSGAGG00000006666	-	97	76.355	ENSORLG00015013772	eif3c	93	74.130	Oryzias_latipes_hsok
ENSGAGG00000006666	-	100	75.058	ENSOMEG00000020450	eif3c	68	83.067	Oryzias_melastigma
ENSGAGG00000006666	-	100	83.353	ENSOGAG00000012737	-	92	83.235	Otolemur_garnettii
ENSGAGG00000006666	-	100	83.353	ENSOARG00000002892	-	92	83.589	Ovis_aries
ENSGAGG00000006666	-	100	83.825	ENSPPRG00000012336	-	92	83.589	Panthera_pardus
ENSGAGG00000006666	-	100	83.825	ENSPTIG00000011712	-	92	83.589	Panthera_tigris_altaica
ENSGAGG00000006666	-	100	83.825	ENSPANG00000021151	-	92	83.707	Papio_anubis
ENSGAGG00000006666	-	100	75.349	ENSPKIG00000002049	eif3c	92	75.087	Paramormyrops_kingsleyae
ENSGAGG00000006666	-	89	84.843	ENSPMGG00000005409	eif3c	80	85.240	Periophthalmus_magnuspinnatus
ENSGAGG00000006666	-	100	82.353	ENSPEMG00000010899	Eif3c	92	82.118	Peromyscus_maniculatus_bairdii
ENSGAGG00000006666	-	100	84.379	ENSPCIG00000025206	-	92	85.325	Phascolarctos_cinereus
ENSGAGG00000006666	-	100	75.320	ENSPFOG00000004476	eif3c	93	74.767	Poecilia_formosa
ENSGAGG00000006666	-	100	75.437	ENSPLAG00000017480	eif3c	100	74.884	Poecilia_latipinna
ENSGAGG00000006666	-	100	75.698	ENSPMEG00000019512	eif3c	93	74.971	Poecilia_mexicana
ENSGAGG00000006666	-	100	72.123	ENSPREG00000023139	eif3c	84	84.577	Poecilia_reticulata
ENSGAGG00000006666	-	100	81.110	ENSPPYG00000007227	-	92	80.992	Pongo_abelii
ENSGAGG00000006666	-	72	89.037	ENSPCAG00000012710	-	100	89.037	Procavia_capensis
ENSGAGG00000006666	-	100	84.061	ENSPCOG00000019289	-	92	83.943	Propithecus_coquereli
ENSGAGG00000006666	-	100	83.589	ENSPVAG00000005804	-	92	83.471	Pteropus_vampyrus
ENSGAGG00000006666	-	63	66.456	ENSPNYG00000016530	eif3c	71	81.818	Pundamilia_nyererei
ENSGAGG00000006666	-	99	76.714	ENSPNAG00000024040	eif3c	85	86.426	Pygocentrus_nattereri
ENSGAGG00000006666	-	100	82.033	ENSRNOG00000018761	Eif3c	92	82.840	Rattus_norvegicus
ENSGAGG00000006666	-	98	82.005	ENSRBIG00000044009	-	90	80.760	Rhinopithecus_bieti
ENSGAGG00000006666	-	100	83.825	ENSRROG00000043626	-	92	83.707	Rhinopithecus_roxellana
ENSGAGG00000006666	-	63	31.465	YMR309C	-	66	32.258	Saccharomyces_cerevisiae
ENSGAGG00000006666	-	100	83.589	ENSSBOG00000032155	-	92	83.471	Saimiri_boliviensis_boliviensis
ENSGAGG00000006666	-	100	84.770	ENSSHAG00000011808	-	96	85.714	Sarcophilus_harrisii
ENSGAGG00000006666	-	99	77.022	ENSSFOG00015021823	eif3c	92	76.498	Scleropages_formosus
ENSGAGG00000006666	-	97	77.139	ENSSMAG00000016638	eif3c	89	76.895	Scophthalmus_maximus
ENSGAGG00000006666	-	97	80.673	ENSSDUG00000023117	eif3c	83	85.621	Seriola_dumerili
ENSGAGG00000006666	-	100	74.826	ENSSLDG00000009706	eif3c	84	85.131	Seriola_lalandi_dorsalis
ENSGAGG00000006666	-	100	87.544	ENSSPUG00000016470	-	92	87.070	Sphenodon_punctatus
ENSGAGG00000006666	-	100	76.651	ENSSPAG00000000426	eif3c	92	76.623	Stegastes_partitus
ENSGAGG00000006666	-	100	82.645	ENSSSCG00000034927	-	92	83.471	Sus_scrofa
ENSGAGG00000006666	-	99	74.242	ENSTRUG00000008951	eif3c	92	75.322	Takifugu_rubripes
ENSGAGG00000006666	-	100	74.941	ENSTNIG00000015210	eif3c	93	74.505	Tetraodon_nigroviridis
ENSGAGG00000006666	-	100	83.589	ENSTTRG00000005880	-	92	83.235	Tursiops_truncatus
ENSGAGG00000006666	-	77	87.097	ENSUAMG00000001127	-	91	92.994	Ursus_americanus
ENSGAGG00000006666	-	100	83.707	ENSUMAG00000010927	-	92	83.589	Ursus_maritimus
ENSGAGG00000006666	-	100	83.117	ENSVVUG00000025970	-	92	82.409	Vulpes_vulpes
ENSGAGG00000006666	-	100	78.271	ENSXETG00000002941	eif3c	92	77.804	Xenopus_tropicalis
ENSGAGG00000006666	-	100	76.678	ENSXMAG00000013796	eif3c	92	76.146	Xiphophorus_maculatus