EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000006683 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 10095 bases
Position: chrPPEB01012680.1:710-10804
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000008404	zf-C2H2	PF00096.26	1.8e-76	1	12
ENSGAGP00000008404	zf-C2H2	PF00096.26	1.8e-76	2	12
ENSGAGP00000008404	zf-C2H2	PF00096.26	1.8e-76	3	12
ENSGAGP00000008404	zf-C2H2	PF00096.26	1.8e-76	4	12
ENSGAGP00000008404	zf-C2H2	PF00096.26	1.8e-76	5	12
ENSGAGP00000008404	zf-C2H2	PF00096.26	1.8e-76	6	12
ENSGAGP00000008404	zf-C2H2	PF00096.26	1.8e-76	7	12
ENSGAGP00000008404	zf-C2H2	PF00096.26	1.8e-76	8	12
ENSGAGP00000008404	zf-C2H2	PF00096.26	1.8e-76	9	12
ENSGAGP00000008404	zf-C2H2	PF00096.26	1.8e-76	10	12
ENSGAGP00000008404	zf-C2H2	PF00096.26	1.8e-76	11	12
ENSGAGP00000008404	zf-C2H2	PF00096.26	1.8e-76	12	12
ENSGAGP00000008407	zf-C2H2	PF00096.26	4.8e-60	1	9
ENSGAGP00000008407	zf-C2H2	PF00096.26	4.8e-60	2	9
ENSGAGP00000008407	zf-C2H2	PF00096.26	4.8e-60	3	9
ENSGAGP00000008407	zf-C2H2	PF00096.26	4.8e-60	4	9
ENSGAGP00000008407	zf-C2H2	PF00096.26	4.8e-60	5	9
ENSGAGP00000008407	zf-C2H2	PF00096.26	4.8e-60	6	9
ENSGAGP00000008407	zf-C2H2	PF00096.26	4.8e-60	7	9
ENSGAGP00000008407	zf-C2H2	PF00096.26	4.8e-60	8	9
ENSGAGP00000008407	zf-C2H2	PF00096.26	4.8e-60	9	9
ENSGAGP00000008406	zf-C2H2	PF00096.26	4.3e-37	1	5
ENSGAGP00000008406	zf-C2H2	PF00096.26	4.3e-37	2	5
ENSGAGP00000008406	zf-C2H2	PF00096.26	4.3e-37	3	5
ENSGAGP00000008406	zf-C2H2	PF00096.26	4.3e-37	4	5
ENSGAGP00000008406	zf-C2H2	PF00096.26	4.3e-37	5	5
ENSGAGP00000008406	zf-met	PF12874.7	1.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000009679	-	1026	-	ENSGAGP00000008407	341 (aa)	-	-
ENSGAGT00000009678	-	603	-	ENSGAGP00000008406	200 (aa)	-	-
ENSGAGT00000009676	-	1446	-	ENSGAGP00000008404	481 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000006683's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000006683's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000006683	-	91	53.020	ENSGAGG00000013021	-	95	53.020
ENSGAGG00000006683	-	88	38.095	ENSGAGG00000020362	PRDM5	68	37.572
ENSGAGG00000006683	-	92	71.034	ENSGAGG00000000971	-	91	71.034
ENSGAGG00000006683	-	96	55.340	ENSGAGG00000017094	-	52	55.340
ENSGAGG00000006683	-	96	63.580	ENSGAGG00000018445	-	99	57.627
ENSGAGG00000006683	-	98	66.467	ENSGAGG00000002828	-	78	66.467
ENSGAGG00000006683	-	98	58.333	ENSGAGG00000017640	-	80	55.224
ENSGAGG00000006683	-	94	72.455	ENSGAGG00000019349	-	77	72.455
ENSGAGG00000006683	-	84	67.532	ENSGAGG00000016529	-	89	65.468
ENSGAGG00000006683	-	97	65.269	ENSGAGG00000010324	-	86	62.249
ENSGAGG00000006683	-	96	46.108	ENSGAGG00000003095	ZNF865	85	41.860
ENSGAGG00000006683	-	89	81.301	ENSGAGG00000017986	-	90	81.301
ENSGAGG00000006683	-	92	59.155	ENSGAGG00000020168	-	75	62.338
ENSGAGG00000006683	-	100	75.152	ENSGAGG00000020594	-	93	73.556
ENSGAGG00000006683	-	91	69.643	ENSGAGG00000013851	-	98	62.768
ENSGAGG00000006683	-	95	56.886	ENSGAGG00000018885	-	66	60.000
ENSGAGG00000006683	-	97	66.272	ENSGAGG00000009272	-	97	66.818
ENSGAGG00000006683	-	97	66.467	ENSGAGG00000002179	-	97	65.868
ENSGAGG00000006683	-	97	43.103	ENSGAGG00000022571	ZNF319	99	45.238
ENSGAGG00000006683	-	97	73.054	ENSGAGG00000008773	-	83	74.251
ENSGAGG00000006683	-	94	64.072	ENSGAGG00000006846	-	90	64.072
ENSGAGG00000006683	-	94	67.857	ENSGAGG00000011487	-	93	61.111
ENSGAGG00000006683	-	95	60.000	ENSGAGG00000006848	-	75	60.000
ENSGAGG00000006683	-	99	69.536	ENSGAGG00000015451	-	88	71.521
ENSGAGG00000006683	-	96	71.271	ENSGAGG00000012452	-	98	66.667
ENSGAGG00000006683	-	100	69.565	ENSGAGG00000004740	-	98	74.054
ENSGAGG00000006683	-	97	66.467	ENSGAGG00000001387	-	70	66.467
ENSGAGG00000006683	-	96	70.833	ENSGAGG00000011574	-	98	66.534
ENSGAGG00000006683	-	97	44.643	ENSGAGG00000003883	ZNF236	58	54.118
ENSGAGG00000006683	-	84	48.649	ENSGAGG00000015899	GFI1	99	48.696
ENSGAGG00000006683	-	94	72.561	ENSGAGG00000006960	-	97	68.788
ENSGAGG00000006683	-	94	73.653	ENSGAGG00000014389	-	99	72.189
ENSGAGG00000006683	-	99	71.111	ENSGAGG00000014356	-	95	61.639
ENSGAGG00000006683	-	95	70.060	ENSGAGG00000002214	-	99	67.732
ENSGAGG00000006683	-	95	71.257	ENSGAGG00000009739	-	99	71.257
ENSGAGG00000006683	-	98	67.665	ENSGAGG00000006323	-	93	67.665
ENSGAGG00000006683	-	95	61.053	ENSGAGG00000010492	-	79	65.363
ENSGAGG00000006683	-	99	60.227	ENSGAGG00000005805	-	100	61.290
ENSGAGG00000006683	-	75	33.094	ENSGAGG00000022082	PRDM15	52	34.559
ENSGAGG00000006683	-	93	60.479	ENSGAGG00000011366	-	99	56.790
ENSGAGG00000006683	-	99	72.455	ENSGAGG00000010833	-	98	68.485
ENSGAGG00000006683	-	95	68.452	ENSGAGG00000001469	-	97	68.452
ENSGAGG00000006683	-	99	63.006	ENSGAGG00000015232	-	87	58.333
ENSGAGG00000006683	-	95	58.553	ENSGAGG00000011399	-	87	59.538
ENSGAGG00000006683	-	84	45.860	ENSGAGG00000021327	GFI1B	58	45.963
ENSGAGG00000006683	-	89	71.257	ENSGAGG00000001645	-	63	71.257
ENSGAGG00000006683	-	95	71.257	ENSGAGG00000007230	-	91	68.548
ENSGAGG00000006683	-	88	54.438	ENSGAGG00000004926	-	97	53.179
ENSGAGG00000006683	-	91	56.140	ENSGAGG00000005331	-	88	53.846
ENSGAGG00000006683	-	89	66.467	ENSGAGG00000020134	-	70	63.190

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000006683	-	93	53.957	ENSAPLG00000012660	-	81	56.886	Anas_platyrhynchos
ENSGAGG00000006683	-	99	56.250	ENSAMXG00000037143	-	96	56.250	Astyanax_mexicanus
ENSGAGG00000006683	-	95	63.095	ENSAMXG00000037326	-	94	59.664	Astyanax_mexicanus
ENSGAGG00000006683	-	88	64.072	ENSAMXG00000041725	-	99	62.126	Astyanax_mexicanus
ENSGAGG00000006683	-	88	65.868	ENSAMXG00000035690	-	79	63.095	Astyanax_mexicanus
ENSGAGG00000006683	-	94	64.000	ENSAMXG00000031489	-	96	64.000	Astyanax_mexicanus
ENSGAGG00000006683	-	99	61.932	ENSAMXG00000040212	-	87	61.932	Astyanax_mexicanus
ENSGAGG00000006683	-	86	62.667	ENSAMXG00000039881	-	62	47.761	Astyanax_mexicanus
ENSGAGG00000006683	-	87	59.000	ENSAMXG00000033124	-	66	55.224	Astyanax_mexicanus
ENSGAGG00000006683	-	94	66.061	ENSAMXG00000011804	-	94	63.668	Astyanax_mexicanus
ENSGAGG00000006683	-	95	61.677	ENSAMXG00000039752	-	89	61.677	Astyanax_mexicanus
ENSGAGG00000006683	-	89	59.903	ENSAMXG00000004610	-	96	60.000	Astyanax_mexicanus
ENSGAGG00000006683	-	94	63.978	ENSAMXG00000025455	-	96	66.667	Astyanax_mexicanus
ENSGAGG00000006683	-	94	62.874	ENSAMXG00000026142	-	89	62.874	Astyanax_mexicanus
ENSGAGG00000006683	-	89	61.350	ENSAMXG00000026144	-	94	58.594	Astyanax_mexicanus
ENSGAGG00000006683	-	96	56.250	ENSAMXG00000043978	-	85	57.082	Astyanax_mexicanus
ENSGAGG00000006683	-	92	63.030	ENSAMXG00000029878	-	92	63.043	Astyanax_mexicanus
ENSGAGG00000006683	-	99	63.473	ENSAMXG00000001626	-	95	63.473	Astyanax_mexicanus
ENSGAGG00000006683	-	88	61.905	ENSAMXG00000032619	-	95	61.905	Astyanax_mexicanus
ENSGAGG00000006683	-	95	59.659	ENSAMXG00000003002	-	90	59.664	Astyanax_mexicanus
ENSGAGG00000006683	-	96	63.636	ENSAMXG00000038453	-	96	59.937	Astyanax_mexicanus
ENSGAGG00000006683	-	90	64.979	ENSAMXG00000037703	-	90	66.883	Astyanax_mexicanus
ENSGAGG00000006683	-	87	59.091	ENSAMXG00000019489	-	93	59.091	Astyanax_mexicanus
ENSGAGG00000006683	-	94	64.072	ENSCPBG00000002014	-	62	57.727	Chrysemys_picta_bellii
ENSGAGG00000006683	-	94	68.862	ENSEASG00005020341	-	93	68.862	Equus_asinus_asinus
ENSGAGG00000006683	-	94	68.862	ENSECAG00000017293	-	95	67.025	Equus_caballus
ENSGAGG00000006683	-	99	67.066	ENSECAG00000039445	-	92	67.066	Equus_caballus
ENSGAGG00000006683	-	94	66.467	ENSIPUG00000015400	-	92	64.286	Ictalurus_punctatus
ENSGAGG00000006683	-	98	62.275	ENSIPUG00000015177	-	61	60.345	Ictalurus_punctatus
ENSGAGG00000006683	-	94	67.045	ENSMPUG00000008437	-	86	67.045	Mustela_putorius_furo
ENSGAGG00000006683	-	98	68.862	ENSPTIG00000009259	-	96	68.862	Panthera_tigris_altaica
ENSGAGG00000006683	-	84	64.881	ENSPSIG00000016247	-	53	64.881	Pelodiscus_sinensis
ENSGAGG00000006683	-	89	62.275	ENSPNAG00000028765	-	87	62.275	Pygocentrus_nattereri
ENSGAGG00000006683	-	94	57.988	ENSPNAG00000000783	-	88	57.988	Pygocentrus_nattereri
ENSGAGG00000006683	-	87	63.158	ENSPNAG00000012138	-	95	60.795	Pygocentrus_nattereri
ENSGAGG00000006683	-	94	63.636	ENSPNAG00000003919	-	96	62.385	Pygocentrus_nattereri
ENSGAGG00000006683	-	88	67.665	ENSPNAG00000016025	-	92	66.047	Pygocentrus_nattereri
ENSGAGG00000006683	-	94	67.066	ENSPNAG00000016045	-	86	66.527	Pygocentrus_nattereri
ENSGAGG00000006683	-	91	64.773	ENSPNAG00000002287	-	94	57.500	Pygocentrus_nattereri
ENSGAGG00000006683	-	95	64.072	ENSPNAG00000012366	-	87	64.072	Pygocentrus_nattereri
ENSGAGG00000006683	-	90	60.000	ENSPNAG00000021942	-	92	65.278	Pygocentrus_nattereri
ENSGAGG00000006683	-	93	63.636	ENSPNAG00000007072	-	92	63.636	Pygocentrus_nattereri
ENSGAGG00000006683	-	95	56.287	ENSPNAG00000029386	-	86	53.543	Pygocentrus_nattereri
ENSGAGG00000006683	-	96	60.795	ENSPNAG00000017479	-	84	60.795	Pygocentrus_nattereri
ENSGAGG00000006683	-	94	61.677	ENSPNAG00000017455	-	84	61.677	Pygocentrus_nattereri
ENSGAGG00000006683	-	88	66.154	ENSPNAG00000008653	-	96	66.154	Pygocentrus_nattereri
ENSGAGG00000006683	-	90	62.989	ENSPNAG00000005914	-	74	64.671	Pygocentrus_nattereri
ENSGAGG00000006683	-	88	67.665	ENSPNAG00000003526	-	82	67.665	Pygocentrus_nattereri
ENSGAGG00000006683	-	94	65.894	ENSPNAG00000018471	-	93	65.894	Pygocentrus_nattereri
ENSGAGG00000006683	-	88	68.263	ENSPNAG00000018437	-	79	64.542	Pygocentrus_nattereri
ENSGAGG00000006683	-	91	58.400	ENSPNAG00000024704	-	93	57.759	Pygocentrus_nattereri
ENSGAGG00000006683	-	95	71.257	ENSUAMG00000027384	-	88	71.257	Ursus_americanus
ENSGAGG00000006683	-	88	66.071	ENSUAMG00000027415	-	91	66.071	Ursus_americanus
ENSGAGG00000006683	-	96	69.718	ENSVPAG00000002698	-	99	69.718	Vicugna_pacos