EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000006802 (Gene tree)
Gene ID: -
Gene Symbol: RAB1A
Alias: RAB1|YPT1
Full Name: RAB1A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 26827 bases
Position: chrPPEB01006039.1:47721-74547
Accession: 9758
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000008579	MMR_HSR1	PF01926.23	1.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000009868	RAB1A-201	875	-	ENSGAGP00000008579	205 (aa)	-	UPI00005E74B0

Gene Model

Click here to download ENSGAGG00000006802's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000006802's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000006802	RAB1A	57	31.933	ENSGAGG00000013550	ARL4C	61	31.933
ENSGAGG00000006802	RAB1A	81	51.205	ENSGAGG00000004474	RAB30	82	51.205
ENSGAGG00000006802	RAB1A	82	49.704	ENSGAGG00000007278	RAB12	69	49.704
ENSGAGG00000006802	RAB1A	94	38.308	ENSGAGG00000022371	-	93	38.308
ENSGAGG00000006802	RAB1A	94	39.394	ENSGAGG00000021701	RAB6A	93	39.394
ENSGAGG00000006802	RAB1A	82	60.355	ENSGAGG00000000742	-	99	55.446
ENSGAGG00000006802	RAB1A	80	44.242	ENSGAGG00000004921	RAB42	79	44.785
ENSGAGG00000006802	RAB1A	79	30.994	ENSGAGG00000015067	RASL11A	72	30.994
ENSGAGG00000006802	RAB1A	86	43.820	ENSGAGG00000008447	RAB39B	84	43.820
ENSGAGG00000006802	RAB1A	57	35.294	ENSGAGG00000014586	ARL14	56	35.294
ENSGAGG00000006802	RAB1A	90	39.785	ENSGAGG00000004918	-	92	39.785
ENSGAGG00000006802	RAB1A	61	34.127	ENSGAGG00000016932	-	94	34.783
ENSGAGG00000006802	RAB1A	80	47.619	ENSGAGG00000009488	RAB33A	74	47.619
ENSGAGG00000006802	RAB1A	99	53.960	ENSGAGG00000017207	RAB35	100	53.960
ENSGAGG00000006802	RAB1A	98	38.350	ENSGAGG00000002936	RAB33B	90	38.350
ENSGAGG00000006802	RAB1A	94	37.321	ENSGAGG00000025340	RAB36	78	37.321
ENSGAGG00000006802	RAB1A	77	38.509	ENSGAGG00000012473	RAB34	69	38.509
ENSGAGG00000006802	RAB1A	60	33.333	ENSGAGG00000024318	ARL4D	62	33.333
ENSGAGG00000006802	RAB1A	80	35.928	ENSGAGG00000020094	MRAS	80	35.928
ENSGAGG00000006802	RAB1A	95	44.330	ENSGAGG00000005319	RAB5A	90	44.330
ENSGAGG00000006802	RAB1A	87	32.973	ENSGAGG00000021838	RERG	90	32.973
ENSGAGG00000006802	RAB1A	100	42.326	ENSGAGG00000004988	RAB14	100	42.326
ENSGAGG00000006802	RAB1A	85	52.299	ENSGAGG00000014814	RAB11A	81	52.299
ENSGAGG00000006802	RAB1A	84	45.349	ENSGAGG00000020703	RAB25	81	45.349
ENSGAGG00000006802	RAB1A	100	44.601	ENSGAGG00000020702	-	99	44.601
ENSGAGG00000006802	RAB1A	68	30.496	ENSGAGG00000024365	ARL3	78	30.496
ENSGAGG00000006802	RAB1A	78	39.264	ENSGAGG00000012234	RAB7A	79	39.264
ENSGAGG00000006802	RAB1A	57	31.933	ENSGAGG00000019544	ARL4A	59	31.933
ENSGAGG00000006802	RAB1A	63	37.879	ENSGAGG00000020394	RAB7B	84	37.879
ENSGAGG00000006802	RAB1A	57	35.537	ENSGAGG00000014554	-	52	35.537
ENSGAGG00000006802	RAB1A	80	38.415	ENSGAGG00000017673	NRAS	86	38.415
ENSGAGG00000006802	RAB1A	85	51.149	ENSGAGG00000012557	-	80	51.149
ENSGAGG00000006802	RAB1A	97	44.393	ENSGAGG00000023041	RAB2B	99	44.393
ENSGAGG00000006802	RAB1A	74	32.237	ENSGAGG00000025053	RRAS2	80	32.927
ENSGAGG00000006802	RAB1A	75	33.987	ENSGAGG00000012709	RAB23	73	32.370
ENSGAGG00000006802	RAB1A	76	38.994	ENSGAGG00000017981	RAB9A	79	38.994
ENSGAGG00000006802	RAB1A	90	48.108	ENSGAGG00000005606	RAB2A	99	44.762
ENSGAGG00000006802	RAB1A	95	44.949	ENSGAGG00000015642	-	95	44.949
ENSGAGG00000006802	RAB1A	84	34.463	ENSGAGG00000019886	-	93	34.463
ENSGAGG00000006802	RAB1A	80	37.805	ENSGAGG00000011057	KRAS	95	35.912
ENSGAGG00000006802	RAB1A	95	38.144	ENSGAGG00000018569	RAB22A	97	38.144
ENSGAGG00000006802	RAB1A	76	38.994	ENSGAGG00000012314	RAB9B	79	38.994
ENSGAGG00000006802	RAB1A	99	93.069	ENSGAGG00000023956	RAB1B	100	93.069
ENSGAGG00000006802	RAB1A	91	46.809	ENSGAGG00000013139	RAB19	85	46.809
ENSGAGG00000006802	RAB1A	80	38.788	ENSGAGG00000011790	-	88	38.788

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000006802	RAB1A	100	99.512	ENSG00000138069	RAB1A	100	100.000	Homo_sapiens
ENSGAGG00000006802	RAB1A	99	96.040	ENSAPOG00000008143	-	100	96.040	Acanthochromis_polyacanthus
ENSGAGG00000006802	RAB1A	100	99.512	ENSAMEG00000001127	RAB1A	100	99.512	Ailuropoda_melanoleuca
ENSGAGG00000006802	RAB1A	99	96.040	ENSAOCG00000020606	-	100	96.040	Amphiprion_ocellaris
ENSGAGG00000006802	RAB1A	99	96.040	ENSAPEG00000022488	-	100	96.040	Amphiprion_percula
ENSGAGG00000006802	RAB1A	100	99.512	ENSANAG00000020929	RAB1A	100	99.512	Aotus_nancymaae
ENSGAGG00000006802	RAB1A	99	96.535	ENSACLG00000003326	-	100	96.535	Astatotilapia_calliptera
ENSGAGG00000006802	RAB1A	99	94.554	ENSAMXG00000034850	-	100	94.554	Astyanax_mexicanus
ENSGAGG00000006802	RAB1A	100	99.512	ENSBTAG00000016720	RAB1A	100	99.512	Bos_taurus
ENSGAGG00000006802	RAB1A	100	99.512	ENSCJAG00000046275	RAB1A	100	99.512	Callithrix_jacchus
ENSGAGG00000006802	RAB1A	100	99.512	ENSCAFG00000003187	RAB1A	100	99.512	Canis_familiaris
ENSGAGG00000006802	RAB1A	100	99.512	ENSCAFG00020026971	RAB1A	100	99.512	Canis_lupus_dingo
ENSGAGG00000006802	RAB1A	99	96.585	ENSCHIG00000014060	RAB1A	100	96.585	Capra_hircus
ENSGAGG00000006802	RAB1A	100	97.561	ENSTSYG00000005996	RAB1A	100	99.492	Carlito_syrichta
ENSGAGG00000006802	RAB1A	100	99.512	ENSCPOG00000015437	RAB1A	100	99.512	Cavia_porcellus
ENSGAGG00000006802	RAB1A	100	99.512	ENSCCAG00000021869	RAB1A	100	99.512	Cebus_capucinus
ENSGAGG00000006802	RAB1A	100	99.512	ENSCATG00000030853	RAB1A	100	99.512	Cercocebus_atys
ENSGAGG00000006802	RAB1A	100	99.512	ENSCLAG00000014766	RAB1A	100	99.512	Chinchilla_lanigera
ENSGAGG00000006802	RAB1A	100	100.000	ENSCPBG00000013243	RAB1A	100	100.000	Chrysemys_picta_bellii
ENSGAGG00000006802	RAB1A	100	97.073	ENSCANG00000035916	RAB1A	100	97.073	Colobus_angolensis_palliatus
ENSGAGG00000006802	RAB1A	100	99.512	ENSCGRG00001012691	-	100	99.512	Cricetulus_griseus_chok1gshd
ENSGAGG00000006802	RAB1A	100	99.512	ENSCGRG00000008456	-	100	99.512	Cricetulus_griseus_crigri
ENSGAGG00000006802	RAB1A	100	99.512	ENSDNOG00000018236	RAB1A	100	99.512	Dasypus_novemcinctus
ENSGAGG00000006802	RAB1A	100	99.512	ENSDORG00000028628	-	100	99.512	Dipodomys_ordii
ENSGAGG00000006802	RAB1A	100	84.466	FBgn0285937	Rab1	100	84.466	Drosophila_melanogaster
ENSGAGG00000006802	RAB1A	99	99.505	ENSETEG00000002205	RAB1A	100	99.505	Echinops_telfairi
ENSGAGG00000006802	RAB1A	100	99.512	ENSEASG00005007298	RAB1A	100	99.512	Equus_asinus_asinus
ENSGAGG00000006802	RAB1A	100	99.512	ENSECAG00000009926	RAB1A	100	99.512	Equus_caballus
ENSGAGG00000006802	RAB1A	99	99.505	ENSEEUG00000011721	RAB1A	100	99.505	Erinaceus_europaeus
ENSGAGG00000006802	RAB1A	99	95.588	ENSELUG00000012166	RAB1A	96	95.588	Esox_lucius
ENSGAGG00000006802	RAB1A	100	99.512	ENSFCAG00000002536	RAB1A	100	99.512	Felis_catus
ENSGAGG00000006802	RAB1A	99	98.030	ENSFALG00000013624	RAB1A	99	98.030	Ficedula_albicollis
ENSGAGG00000006802	RAB1A	100	99.512	ENSFDAG00000019505	-	100	99.512	Fukomys_damarensis
ENSGAGG00000006802	RAB1A	99	95.050	ENSFHEG00000014414	-	100	95.050	Fundulus_heteroclitus
ENSGAGG00000006802	RAB1A	100	100.000	ENSGALG00000031582	RAB1A	100	100.000	Gallus_gallus
ENSGAGG00000006802	RAB1A	99	95.050	ENSGAFG00000000918	-	100	95.050	Gambusia_affinis
ENSGAGG00000006802	RAB1A	100	99.512	ENSGGOG00000026603	RAB1A	100	99.512	Gorilla_gorilla
ENSGAGG00000006802	RAB1A	100	99.512	ENSHGLG00000013585	RAB1A	100	99.512	Heterocephalus_glaber_female
ENSGAGG00000006802	RAB1A	99	97.059	ENSHGLG00100007994	RAB1A	99	97.059	Heterocephalus_glaber_male
ENSGAGG00000006802	RAB1A	100	99.512	ENSSTOG00000020693	-	100	99.512	Ictidomys_tridecemlineatus
ENSGAGG00000006802	RAB1A	96	99.492	ENSJJAG00000014396	Rab1a	100	99.492	Jaculus_jaculus
ENSGAGG00000006802	RAB1A	96	95.431	ENSKMAG00000014038	-	93	95.431	Kryptolebias_marmoratus
ENSGAGG00000006802	RAB1A	99	95.545	ENSLBEG00000028426	RAB1A	100	95.545	Labrus_bergylta
ENSGAGG00000006802	RAB1A	100	98.049	ENSLACG00000012869	RAB1A	100	98.049	Latimeria_chalumnae
ENSGAGG00000006802	RAB1A	100	99.512	ENSLAFG00000016666	RAB1A	100	99.512	Loxodonta_africana
ENSGAGG00000006802	RAB1A	100	99.512	ENSMFAG00000046246	RAB1A	100	99.512	Macaca_fascicularis
ENSGAGG00000006802	RAB1A	96	99.492	ENSMMUG00000021721	RAB1A	91	99.492	Macaca_mulatta
ENSGAGG00000006802	RAB1A	95	99.485	ENSMNEG00000028414	-	97	99.485	Macaca_nemestrina
ENSGAGG00000006802	RAB1A	100	99.512	ENSMLEG00000042535	RAB1A	100	99.512	Mandrillus_leucophaeus
ENSGAGG00000006802	RAB1A	99	96.535	ENSMZEG00005013959	-	100	96.535	Maylandia_zebra
ENSGAGG00000006802	RAB1A	96	100.000	ENSMGAG00000004611	RAB1A	98	100.000	Meleagris_gallopavo
ENSGAGG00000006802	RAB1A	100	99.024	ENSMAUG00000012156	Rab1a	100	99.024	Mesocricetus_auratus
ENSGAGG00000006802	RAB1A	100	99.512	ENSMICG00000012587	RAB1A	100	99.512	Microcebus_murinus
ENSGAGG00000006802	RAB1A	100	99.024	ENSMOCG00000017022	Rab1a	100	99.024	Microtus_ochrogaster
ENSGAGG00000006802	RAB1A	99	94.059	ENSMMOG00000018709	RAB1A	100	94.059	Mola_mola
ENSGAGG00000006802	RAB1A	100	100.000	ENSMODG00000003340	RAB1A	100	100.000	Monodelphis_domestica
ENSGAGG00000006802	RAB1A	100	99.512	MGP_CAROLIEiJ_G0016115	Rab1a	100	99.512	Mus_caroli
ENSGAGG00000006802	RAB1A	100	99.512	ENSMUSG00000020149	Rab1a	100	99.512	Mus_musculus
ENSGAGG00000006802	RAB1A	100	99.512	MGP_PahariEiJ_G0016776	Rab1a	100	99.512	Mus_pahari
ENSGAGG00000006802	RAB1A	100	99.512	MGP_SPRETEiJ_G0016958	Rab1a	100	99.512	Mus_spretus
ENSGAGG00000006802	RAB1A	100	99.512	ENSMPUG00000006139	RAB1A	82	99.512	Mustela_putorius_furo
ENSGAGG00000006802	RAB1A	100	99.512	ENSMLUG00000009489	RAB1A	100	99.512	Myotis_lucifugus
ENSGAGG00000006802	RAB1A	100	99.512	ENSNGAG00000005838	Rab1a	100	99.512	Nannospalax_galili
ENSGAGG00000006802	RAB1A	99	96.535	ENSNBRG00000020492	-	100	96.535	Neolamprologus_brichardi
ENSGAGG00000006802	RAB1A	96	99.492	ENSOPRG00000006595	RAB1A	100	99.492	Ochotona_princeps
ENSGAGG00000006802	RAB1A	94	99.479	ENSODEG00000011248	-	96	99.479	Octodon_degus
ENSGAGG00000006802	RAB1A	99	94.118	ENSONIG00000006819	-	100	94.118	Oreochromis_niloticus
ENSGAGG00000006802	RAB1A	100	100.000	ENSOANG00000012438	RAB1A	100	100.000	Ornithorhynchus_anatinus
ENSGAGG00000006802	RAB1A	100	99.512	ENSOCUG00000017003	RAB1A	100	99.512	Oryctolagus_cuniculus
ENSGAGG00000006802	RAB1A	100	99.512	ENSOGAG00000026181	RAB1A	100	99.512	Otolemur_garnettii
ENSGAGG00000006802	RAB1A	96	99.492	ENSOARG00000019997	RAB1A	97	99.492	Ovis_aries
ENSGAGG00000006802	RAB1A	99	99.505	ENSPPAG00000030253	RAB1A	100	99.505	Pan_paniscus
ENSGAGG00000006802	RAB1A	100	99.512	ENSPPRG00000025077	RAB1A	100	99.512	Panthera_pardus
ENSGAGG00000006802	RAB1A	96	99.492	ENSPTIG00000013471	RAB1A	97	99.492	Panthera_tigris_altaica
ENSGAGG00000006802	RAB1A	100	99.512	ENSPTRG00000011989	RAB1A	100	99.512	Pan_troglodytes
ENSGAGG00000006802	RAB1A	100	99.512	ENSPANG00000010485	RAB1A	100	99.512	Papio_anubis
ENSGAGG00000006802	RAB1A	99	97.044	ENSPSIG00000008028	RAB1A	99	97.044	Pelodiscus_sinensis
ENSGAGG00000006802	RAB1A	99	96.078	ENSPMGG00000021015	-	99	96.078	Periophthalmus_magnuspinnatus
ENSGAGG00000006802	RAB1A	100	99.512	ENSPEMG00000009340	Rab1a	100	99.512	Peromyscus_maniculatus_bairdii
ENSGAGG00000006802	RAB1A	100	100.000	ENSPCIG00000023212	RAB1A	100	100.000	Phascolarctos_cinereus
ENSGAGG00000006802	RAB1A	99	93.627	ENSPFOG00000000498	-	99	93.627	Poecilia_formosa
ENSGAGG00000006802	RAB1A	99	94.554	ENSPLAG00000015592	-	100	94.554	Poecilia_latipinna
ENSGAGG00000006802	RAB1A	99	94.554	ENSPMEG00000005288	-	100	94.554	Poecilia_mexicana
ENSGAGG00000006802	RAB1A	100	99.512	ENSPPYG00000012360	RAB1A	100	99.512	Pongo_abelii
ENSGAGG00000006802	RAB1A	100	99.512	ENSPCOG00000017244	RAB1A	100	99.512	Propithecus_coquereli
ENSGAGG00000006802	RAB1A	99	96.535	ENSPNYG00000015841	-	100	96.535	Pundamilia_nyererei
ENSGAGG00000006802	RAB1A	100	99.512	ENSRNOG00000004992	Rab1a	100	99.512	Rattus_norvegicus
ENSGAGG00000006802	RAB1A	100	99.512	ENSSBOG00000023732	RAB1A	100	99.512	Saimiri_boliviensis_boliviensis
ENSGAGG00000006802	RAB1A	98	98.507	ENSSHAG00000003597	RAB1A	98	98.507	Sarcophilus_harrisii
ENSGAGG00000006802	RAB1A	99	96.040	ENSSMAG00000021049	-	100	96.040	Scophthalmus_maximus
ENSGAGG00000006802	RAB1A	99	96.535	ENSSDUG00000022535	RAB1A	100	96.535	Seriola_dumerili
ENSGAGG00000006802	RAB1A	100	100.000	ENSSPUG00000012822	RAB1A	100	100.000	Sphenodon_punctatus
ENSGAGG00000006802	RAB1A	99	96.040	ENSSPAG00000012564	-	100	96.040	Stegastes_partitus
ENSGAGG00000006802	RAB1A	100	99.512	ENSSSCG00000008359	RAB1A	100	99.512	Sus_scrofa
ENSGAGG00000006802	RAB1A	100	97.561	ENSTGUG00000002328	RAB1A	100	97.561	Taeniopygia_guttata
ENSGAGG00000006802	RAB1A	99	95.545	ENSTRUG00000024994	RAB1A	100	95.545	Takifugu_rubripes
ENSGAGG00000006802	RAB1A	96	99.492	ENSUMAG00000021038	RAB1A	99	99.492	Ursus_maritimus
ENSGAGG00000006802	RAB1A	97	98.990	ENSVPAG00000005640	RAB1A	99	98.990	Vicugna_pacos
ENSGAGG00000006802	RAB1A	100	99.512	ENSVVUG00000027588	RAB1A	100	99.512	Vulpes_vulpes
ENSGAGG00000006802	RAB1A	99	95.050	ENSXMAG00000015776	-	100	95.050	Xiphophorus_maculatus