EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000006825 (Gene tree)
Gene ID: -
Gene Symbol: TSEN54
Alias: SEN54|SEN54L
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 17744 bases
Position: chrPPEB01000061.1:350306-368049
Accession: 27561
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000008608	tRNA_int_end_N2	PF12928.7	2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000009900	TSEN54-201	3185	-	ENSGAGP00000008608	535 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000006825's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000006825's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000006825	TSEN54	99	56.030	ENSG00000182173	TSEN54	98	74.820	Homo_sapiens
ENSGAGG00000006825	TSEN54	96	49.035	ENSAPOG00000009659	tsen54	99	47.113	Acanthochromis_polyacanthus
ENSGAGG00000006825	TSEN54	97	55.344	ENSAMEG00000009414	TSEN54	97	55.534	Ailuropoda_melanoleuca
ENSGAGG00000006825	TSEN54	96	48.936	ENSAOCG00000000152	tsen54	95	48.936	Amphiprion_ocellaris
ENSGAGG00000006825	TSEN54	96	48.743	ENSAPEG00000018931	tsen54	94	48.743	Amphiprion_percula
ENSGAGG00000006825	TSEN54	96	45.802	ENSATEG00000019860	tsen54	97	45.992	Anabas_testudineus
ENSGAGG00000006825	TSEN54	86	70.742	ENSAPLG00000009419	TSEN54	100	70.742	Anas_platyrhynchos
ENSGAGG00000006825	TSEN54	98	63.498	ENSACAG00000006714	TSEN54	99	63.498	Anolis_carolinensis
ENSGAGG00000006825	TSEN54	97	55.747	ENSANAG00000024061	TSEN54	100	56.377	Aotus_nancymaae
ENSGAGG00000006825	TSEN54	96	47.280	ENSACLG00000019800	tsen54	97	47.297	Astatotilapia_calliptera
ENSGAGG00000006825	TSEN54	96	48.555	ENSAMXG00000006546	tsen54	96	48.555	Astyanax_mexicanus
ENSGAGG00000006825	TSEN54	99	54.696	ENSBTAG00000000824	TSEN54	100	55.720	Bos_taurus
ENSGAGG00000006825	TSEN54	97	55.747	ENSCJAG00000014278	TSEN54	100	56.562	Callithrix_jacchus
ENSGAGG00000006825	TSEN54	99	56.111	ENSCAFG00000004798	TSEN54	100	56.111	Canis_familiaris
ENSGAGG00000006825	TSEN54	99	56.111	ENSCAFG00020000312	TSEN54	100	56.111	Canis_lupus_dingo
ENSGAGG00000006825	TSEN54	99	55.741	ENSCHIG00000019908	TSEN54	100	55.741	Capra_hircus
ENSGAGG00000006825	TSEN54	86	53.846	ENSTSYG00000037439	TSEN54	100	54.274	Carlito_syrichta
ENSGAGG00000006825	TSEN54	97	56.622	ENSCCAG00000036624	TSEN54	100	56.562	Cebus_capucinus
ENSGAGG00000006825	TSEN54	97	56.622	ENSCATG00000042877	TSEN54	99	56.238	Cercocebus_atys
ENSGAGG00000006825	TSEN54	97	55.894	ENSCLAG00000002924	TSEN54	100	55.249	Chinchilla_lanigera
ENSGAGG00000006825	TSEN54	99	54.917	ENSCSAG00000004809	TSEN54	100	55.762	Chlorocebus_sabaeus
ENSGAGG00000006825	TSEN54	99	94.886	ENSCPBG00000028071	TSEN54	100	94.886	Chrysemys_picta_bellii
ENSGAGG00000006825	TSEN54	99	55.762	ENSCANG00000028053	TSEN54	100	55.948	Colobus_angolensis_palliatus
ENSGAGG00000006825	TSEN54	99	54.562	ENSCGRG00001020029	Tsen54	100	54.562	Cricetulus_griseus_chok1gshd
ENSGAGG00000006825	TSEN54	84	52.203	ENSCGRG00000016289	Tsen54	100	52.203	Cricetulus_griseus_crigri
ENSGAGG00000006825	TSEN54	80	39.907	ENSCSEG00000020586	tsen54	99	39.907	Cynoglossus_semilaevis
ENSGAGG00000006825	TSEN54	80	46.296	ENSDARG00000036844	tsen54	100	47.454	Danio_rerio
ENSGAGG00000006825	TSEN54	99	54.545	ENSDNOG00000018452	TSEN54	100	54.917	Dasypus_novemcinctus
ENSGAGG00000006825	TSEN54	99	55.307	ENSDORG00000004073	Tsen54	100	55.680	Dipodomys_ordii
ENSGAGG00000006825	TSEN54	97	35.926	ENSEBUG00000005203	TSEN54	96	35.741	Eptatretus_burgeri
ENSGAGG00000006825	TSEN54	99	55.784	ENSEASG00005000579	TSEN54	100	55.784	Equus_asinus_asinus
ENSGAGG00000006825	TSEN54	99	55.597	ENSECAG00000004924	TSEN54	100	55.597	Equus_caballus
ENSGAGG00000006825	TSEN54	86	53.305	ENSEEUG00000008467	TSEN54	100	53.518	Erinaceus_europaeus
ENSGAGG00000006825	TSEN54	97	45.607	ENSELUG00000017703	tsen54	91	45.607	Esox_lucius
ENSGAGG00000006825	TSEN54	99	55.844	ENSFCAG00000023712	TSEN54	100	56.030	Felis_catus
ENSGAGG00000006825	TSEN54	97	68.654	ENSFALG00000001119	TSEN54	98	68.061	Ficedula_albicollis
ENSGAGG00000006825	TSEN54	85	55.435	ENSFDAG00000019090	TSEN54	99	55.435	Fukomys_damarensis
ENSGAGG00000006825	TSEN54	96	47.566	ENSFHEG00000005470	tsen54	97	47.566	Fundulus_heteroclitus
ENSGAGG00000006825	TSEN54	78	47.568	ENSGMOG00000013146	tsen54	96	47.568	Gadus_morhua
ENSGAGG00000006825	TSEN54	93	64.315	ENSGALG00000047163	TSEN54	97	64.315	Gallus_gallus
ENSGAGG00000006825	TSEN54	96	49.419	ENSGAFG00000005111	tsen54	97	49.419	Gambusia_affinis
ENSGAGG00000006825	TSEN54	96	45.648	ENSGACG00000014987	tsen54	99	46.228	Gasterosteus_aculeatus
ENSGAGG00000006825	TSEN54	96	56.840	ENSGGOG00000009417	TSEN54	100	57.722	Gorilla_gorilla
ENSGAGG00000006825	TSEN54	87	46.186	ENSHBUG00000018296	tsen54	89	45.957	Haplochromis_burtoni
ENSGAGG00000006825	TSEN54	99	57.037	ENSHGLG00000007979	TSEN54	100	57.037	Heterocephalus_glaber_female
ENSGAGG00000006825	TSEN54	99	56.111	ENSHGLG00100005497	TSEN54	100	56.111	Heterocephalus_glaber_male
ENSGAGG00000006825	TSEN54	80	44.820	ENSHCOG00000007481	tsen54	99	44.820	Hippocampus_comes
ENSGAGG00000006825	TSEN54	99	42.164	ENSIPUG00000000590	tsen54	100	42.164	Ictalurus_punctatus
ENSGAGG00000006825	TSEN54	99	54.461	ENSSTOG00000012883	TSEN54	100	54.275	Ictidomys_tridecemlineatus
ENSGAGG00000006825	TSEN54	99	56.642	ENSJJAG00000007365	Tsen54	100	56.642	Jaculus_jaculus
ENSGAGG00000006825	TSEN54	96	48.099	ENSKMAG00000006944	tsen54	97	48.099	Kryptolebias_marmoratus
ENSGAGG00000006825	TSEN54	96	45.681	ENSLBEG00000004199	tsen54	97	45.489	Labrus_bergylta
ENSGAGG00000006825	TSEN54	96	50.667	ENSLACG00000009497	TSEN54	100	50.667	Latimeria_chalumnae
ENSGAGG00000006825	TSEN54	96	48.030	ENSLOCG00000011191	tsen54	97	47.736	Lepisosteus_oculatus
ENSGAGG00000006825	TSEN54	92	54.890	ENSLAFG00000011655	TSEN54	96	51.654	Loxodonta_africana
ENSGAGG00000006825	TSEN54	99	55.288	ENSMFAG00000000712	TSEN54	100	56.134	Macaca_fascicularis
ENSGAGG00000006825	TSEN54	99	55.102	ENSMNEG00000029199	TSEN54	100	55.948	Macaca_nemestrina
ENSGAGG00000006825	TSEN54	86	53.780	ENSMLEG00000044168	TSEN54	88	54.762	Mandrillus_leucophaeus
ENSGAGG00000006825	TSEN54	96	46.899	ENSMAMG00000019773	tsen54	97	46.935	Mastacembelus_armatus
ENSGAGG00000006825	TSEN54	96	47.092	ENSMZEG00005000884	tsen54	97	47.104	Maylandia_zebra
ENSGAGG00000006825	TSEN54	97	63.619	ENSMGAG00000009556	TSEN54	98	63.740	Meleagris_gallopavo
ENSGAGG00000006825	TSEN54	99	55.307	ENSMAUG00000016838	Tsen54	100	55.307	Mesocricetus_auratus
ENSGAGG00000006825	TSEN54	99	56.262	ENSMICG00000044012	TSEN54	100	56.449	Microcebus_murinus
ENSGAGG00000006825	TSEN54	99	55.926	ENSMOCG00000021585	Tsen54	100	55.926	Microtus_ochrogaster
ENSGAGG00000006825	TSEN54	96	45.455	ENSMMOG00000020189	tsen54	99	46.718	Mola_mola
ENSGAGG00000006825	TSEN54	97	55.577	ENSMODG00000007438	TSEN54	98	55.433	Monodelphis_domestica
ENSGAGG00000006825	TSEN54	96	48.473	ENSMALG00000020573	tsen54	97	48.762	Monopterus_albus
ENSGAGG00000006825	TSEN54	99	54.935	MGP_CAROLIEiJ_G0017417	Tsen54	100	54.935	Mus_caroli
ENSGAGG00000006825	TSEN54	99	55.576	ENSMUSG00000020781	Tsen54	100	55.576	Mus_musculus
ENSGAGG00000006825	TSEN54	99	55.121	MGP_PahariEiJ_G0018547	Tsen54	100	55.121	Mus_pahari
ENSGAGG00000006825	TSEN54	99	55.390	MGP_SPRETEiJ_G0018262	Tsen54	100	55.390	Mus_spretus
ENSGAGG00000006825	TSEN54	99	54.360	ENSMPUG00000013870	TSEN54	100	55.185	Mustela_putorius_furo
ENSGAGG00000006825	TSEN54	99	54.766	ENSMLUG00000015298	TSEN54	100	55.056	Myotis_lucifugus
ENSGAGG00000006825	TSEN54	99	56.052	ENSNGAG00000015673	Tsen54	100	56.052	Nannospalax_galili
ENSGAGG00000006825	TSEN54	88	52.795	ENSMEUG00000011908	TSEN54	100	52.795	Notamacropus_eugenii
ENSGAGG00000006825	TSEN54	97	52.008	ENSOPRG00000012513	TSEN54	97	52.008	Ochotona_princeps
ENSGAGG00000006825	TSEN54	96	48.456	ENSONIG00000009543	tsen54	97	48.263	Oreochromis_niloticus
ENSGAGG00000006825	TSEN54	99	50.182	ENSOCUG00000009875	TSEN54	99	51.087	Oryctolagus_cuniculus
ENSGAGG00000006825	TSEN54	96	46.463	ENSORLG00000000852	tsen54	97	46.080	Oryzias_latipes
ENSGAGG00000006825	TSEN54	96	46.552	ENSORLG00020018221	tsen54	97	46.360	Oryzias_latipes_hni
ENSGAGG00000006825	TSEN54	96	46.552	ENSORLG00015009413	tsen54	85	60.150	Oryzias_latipes_hsok
ENSGAGG00000006825	TSEN54	96	47.184	ENSOMEG00000014402	tsen54	94	46.990	Oryzias_melastigma
ENSGAGG00000006825	TSEN54	99	53.918	ENSOGAG00000001442	TSEN54	100	53.918	Otolemur_garnettii
ENSGAGG00000006825	TSEN54	86	53.219	ENSOARG00000010361	TSEN54	100	53.961	Ovis_aries
ENSGAGG00000006825	TSEN54	94	57.396	ENSPPAG00000043519	TSEN54	99	57.594	Pan_paniscus
ENSGAGG00000006825	TSEN54	99	56.215	ENSPPRG00000009162	TSEN54	100	56.401	Panthera_pardus
ENSGAGG00000006825	TSEN54	86	54.409	ENSPTIG00000019312	TSEN54	96	54.409	Panthera_tigris_altaica
ENSGAGG00000006825	TSEN54	99	56.215	ENSPTRG00000009646	TSEN54	100	57.276	Pan_troglodytes
ENSGAGG00000006825	TSEN54	99	54.982	ENSPANG00000020133	TSEN54	100	55.823	Papio_anubis
ENSGAGG00000006825	TSEN54	96	45.307	ENSPKIG00000023018	tsen54	100	45.909	Paramormyrops_kingsleyae
ENSGAGG00000006825	TSEN54	80	86.279	ENSPSIG00000012807	TSEN54	100	86.279	Pelodiscus_sinensis
ENSGAGG00000006825	TSEN54	70	59.690	ENSPMGG00000019578	tsen54	81	59.690	Periophthalmus_magnuspinnatus
ENSGAGG00000006825	TSEN54	99	55.307	ENSPEMG00000014857	Tsen54	100	55.307	Peromyscus_maniculatus_bairdii
ENSGAGG00000006825	TSEN54	96	49.136	ENSPFOG00000022740	tsen54	97	49.421	Poecilia_formosa
ENSGAGG00000006825	TSEN54	96	49.035	ENSPLAG00000014847	tsen54	97	49.320	Poecilia_latipinna
ENSGAGG00000006825	TSEN54	96	48.456	ENSPMEG00000022876	tsen54	97	48.456	Poecilia_mexicana
ENSGAGG00000006825	TSEN54	98	47.818	ENSPREG00000013090	tsen54	99	47.575	Poecilia_reticulata
ENSGAGG00000006825	TSEN54	91	54.938	ENSPPYG00000008629	TSEN54	100	55.144	Pongo_abelii
ENSGAGG00000006825	TSEN54	93	49.800	ENSPCAG00000002093	TSEN54	97	49.600	Procavia_capensis
ENSGAGG00000006825	TSEN54	99	56.848	ENSPCOG00000027880	TSEN54	99	57.036	Propithecus_coquereli
ENSGAGG00000006825	TSEN54	99	55.185	ENSPVAG00000008446	TSEN54	100	55.185	Pteropus_vampyrus
ENSGAGG00000006825	TSEN54	92	48.532	ENSPNYG00000010217	tsen54	99	48.538	Pundamilia_nyererei
ENSGAGG00000006825	TSEN54	96	48.269	ENSPNAG00000003770	tsen54	97	48.462	Pygocentrus_nattereri
ENSGAGG00000006825	TSEN54	99	56.425	ENSRNOG00000004598	Tsen54	100	56.425	Rattus_norvegicus
ENSGAGG00000006825	TSEN54	99	55.762	ENSRBIG00000043040	TSEN54	100	55.948	Rhinopithecus_bieti
ENSGAGG00000006825	TSEN54	99	55.576	ENSRROG00000030797	TSEN54	100	55.762	Rhinopithecus_roxellana
ENSGAGG00000006825	TSEN54	99	52.799	ENSSBOG00000013543	TSEN54	99	54.019	Saimiri_boliviensis_boliviensis
ENSGAGG00000006825	TSEN54	99	55.091	ENSSHAG00000018127	TSEN54	100	55.091	Sarcophilus_harrisii
ENSGAGG00000006825	TSEN54	81	46.528	ENSSFOG00015004093	tsen54	100	46.759	Scleropages_formosus
ENSGAGG00000006825	TSEN54	96	47.115	ENSSMAG00000012449	tsen54	98	47.547	Scophthalmus_maximus
ENSGAGG00000006825	TSEN54	96	48.549	ENSSDUG00000021506	tsen54	97	48.549	Seriola_dumerili
ENSGAGG00000006825	TSEN54	96	48.062	ENSSLDG00000016303	tsen54	97	48.062	Seriola_lalandi_dorsalis
ENSGAGG00000006825	TSEN54	79	65.741	ENSSPUG00000008988	TSEN54	97	65.068	Sphenodon_punctatus
ENSGAGG00000006825	TSEN54	92	49.296	ENSSPAG00000008098	-	99	49.296	Stegastes_partitus
ENSGAGG00000006825	TSEN54	80	44.804	ENSSPAG00000008047	tsen54	99	44.804	Stegastes_partitus
ENSGAGG00000006825	TSEN54	100	55.678	ENSSSCG00000036852	TSEN54	100	55.861	Sus_scrofa
ENSGAGG00000006825	TSEN54	86	70.961	ENSTGUG00000008548	TSEN54	100	70.961	Taeniopygia_guttata
ENSGAGG00000006825	TSEN54	98	46.183	ENSTRUG00000004230	tsen54	98	46.565	Takifugu_rubripes
ENSGAGG00000006825	TSEN54	86	54.468	ENSTTRG00000015828	TSEN54	100	54.468	Tursiops_truncatus
ENSGAGG00000006825	TSEN54	81	51.598	ENSUAMG00000010045	TSEN54	100	51.826	Ursus_americanus
ENSGAGG00000006825	TSEN54	83	52.318	ENSUMAG00000008979	TSEN54	100	52.759	Ursus_maritimus
ENSGAGG00000006825	TSEN54	96	56.840	ENSVVUG00000011411	TSEN54	97	56.840	Vulpes_vulpes
ENSGAGG00000006825	TSEN54	96	51.257	ENSXETG00000012532	tsen54	99	69.167	Xenopus_tropicalis
ENSGAGG00000006825	TSEN54	74	63.473	ENSXCOG00000018245	tsen54	87	63.473	Xiphophorus_couchianus
ENSGAGG00000006825	TSEN54	99	47.114	ENSXMAG00000018818	tsen54	97	47.876	Xiphophorus_maculatus