EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000007108 (Gene tree)
Gene ID: -
Gene Symbol: YTHDC1
Alias: KIAA1966|YT521|YT521-B
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 28836 bases
Position: chrPPEB01007619.1:34620-63455
Accession: 30626
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000009164	YTH	PF04146.15	3.9e-40	1	1
ENSGAGP00000009189	YTH	PF04146.15	4e-40	1	1
ENSGAGP00000009188	YTH	PF04146.15	4.2e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000010552	YTHDC1-203	2052	-	ENSGAGP00000009189	683 (aa)	-	-
ENSGAGT00000010526	YTHDC1-201	2019	-	ENSGAGP00000009164	672 (aa)	-	-
ENSGAGT00000010551	YTHDC1-202	2130	-	ENSGAGP00000009188	709 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000007108's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000007108's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000007108	YTHDC1	93	86.364	ENSG00000083896	YTHDC1	93	86.510	Homo_sapiens
ENSGAGG00000007108	YTHDC1	57	65.722	ENSAPOG00000013997	ythdc1	93	55.781	Acanthochromis_polyacanthus
ENSGAGG00000007108	YTHDC1	60	95.082	ENSAMEG00000005688	YTHDC1	93	85.255	Ailuropoda_melanoleuca
ENSGAGG00000007108	YTHDC1	57	67.971	ENSAOCG00000000239	ythdc1	93	58.725	Amphiprion_ocellaris
ENSGAGG00000007108	YTHDC1	50	68.129	ENSAPEG00000000618	ythdc1	89	58.644	Amphiprion_percula
ENSGAGG00000007108	YTHDC1	91	93.837	ENSAPLG00000009921	YTHDC1	92	91.834	Anas_platyrhynchos
ENSGAGG00000007108	YTHDC1	93	85.757	ENSACAG00000009697	YTHDC1	93	86.507	Anolis_carolinensis
ENSGAGG00000007108	YTHDC1	93	85.652	ENSANAG00000001522	YTHDC1	92	87.221	Aotus_nancymaae
ENSGAGG00000007108	YTHDC1	92	53.949	ENSACLG00000019371	ythdc1	93	58.182	Astatotilapia_calliptera
ENSGAGG00000007108	YTHDC1	92	68.643	ENSAMXG00000006978	ythdc1	92	69.891	Astyanax_mexicanus
ENSGAGG00000007108	YTHDC1	93	84.773	ENSBTAG00000015572	YTHDC1	93	84.627	Bos_taurus
ENSGAGG00000007108	YTHDC1	93	85.505	ENSCJAG00000009934	YTHDC1	93	85.505	Callithrix_jacchus
ENSGAGG00000007108	YTHDC1	60	95.082	ENSCAFG00000002821	YTHDC1	93	85.109	Canis_familiaris
ENSGAGG00000007108	YTHDC1	92	81.487	ENSCAFG00020027112	YTHDC1	93	85.109	Canis_lupus_dingo
ENSGAGG00000007108	YTHDC1	91	80.763	ENSCHIG00000004810	YTHDC1	95	85.300	Capra_hircus
ENSGAGG00000007108	YTHDC1	93	85.484	ENSTSYG00000011668	YTHDC1	93	85.630	Carlito_syrichta
ENSGAGG00000007108	YTHDC1	90	63.522	ENSCAPG00000008722	YTHDC1	90	61.890	Cavia_aperea
ENSGAGG00000007108	YTHDC1	93	78.446	ENSCPOG00000010929	YTHDC1	92	78.963	Cavia_porcellus
ENSGAGG00000007108	YTHDC1	93	85.463	ENSCCAG00000035754	YTHDC1	93	85.463	Cebus_capucinus
ENSGAGG00000007108	YTHDC1	93	86.530	ENSCATG00000036320	YTHDC1	97	85.385	Cercocebus_atys
ENSGAGG00000007108	YTHDC1	92	87.073	ENSCLAG00000005482	YTHDC1	92	87.073	Chinchilla_lanigera
ENSGAGG00000007108	YTHDC1	93	85.359	ENSCSAG00000005252	YTHDC1	93	85.359	Chlorocebus_sabaeus
ENSGAGG00000007108	YTHDC1	99	99.098	ENSCPBG00000021965	YTHDC1	100	99.392	Chrysemys_picta_bellii
ENSGAGG00000007108	YTHDC1	93	85.505	ENSCANG00000004769	YTHDC1	96	85.385	Colobus_angolensis_palliatus
ENSGAGG00000007108	YTHDC1	93	85.484	ENSCGRG00001000816	Ythdc1	93	86.657	Cricetulus_griseus_chok1gshd
ENSGAGG00000007108	YTHDC1	92	85.015	ENSCGRG00000009807	Ythdc1	92	87.037	Cricetulus_griseus_crigri
ENSGAGG00000007108	YTHDC1	92	55.423	ENSCSEG00000020404	ythdc1	93	58.841	Cynoglossus_semilaevis
ENSGAGG00000007108	YTHDC1	57	64.692	ENSCVAG00000022349	ythdc1	93	57.078	Cyprinodon_variegatus
ENSGAGG00000007108	YTHDC1	92	67.656	ENSDARG00000051953	ythdc1	92	67.496	Danio_rerio
ENSGAGG00000007108	YTHDC1	93	85.672	ENSDNOG00000004949	YTHDC1	93	86.263	Dasypus_novemcinctus
ENSGAGG00000007108	YTHDC1	92	86.519	ENSDORG00000013045	Ythdc1	92	86.815	Dipodomys_ordii
ENSGAGG00000007108	YTHDC1	73	97.183	ENSETEG00000001878	YTHDC1	70	97.758	Echinops_telfairi
ENSGAGG00000007108	YTHDC1	86	85.962	ENSEASG00005018383	YTHDC1	93	85.547	Equus_asinus_asinus
ENSGAGG00000007108	YTHDC1	81	95.833	ENSECAG00000018303	YTHDC1	99	83.271	Equus_caballus
ENSGAGG00000007108	YTHDC1	60	93.677	ENSEEUG00000015466	YTHDC1	93	84.187	Erinaceus_europaeus
ENSGAGG00000007108	YTHDC1	92	64.955	ENSELUG00000014029	ythdc1	94	65.773	Esox_lucius
ENSGAGG00000007108	YTHDC1	93	85.088	ENSFCAG00000026791	YTHDC1	93	85.234	Felis_catus
ENSGAGG00000007108	YTHDC1	66	94.390	ENSFALG00000006581	YTHDC1	87	96.250	Ficedula_albicollis
ENSGAGG00000007108	YTHDC1	91	87.112	ENSFDAG00000018560	YTHDC1	92	86.957	Fukomys_damarensis
ENSGAGG00000007108	YTHDC1	57	63.636	ENSFHEG00000001286	ythdc1	61	54.070	Fundulus_heteroclitus
ENSGAGG00000007108	YTHDC1	62	74.009	ENSGMOG00000018815	ythdc1	70	77.340	Gadus_morhua
ENSGAGG00000007108	YTHDC1	92	94.427	ENSGALG00000035906	YTHDC1	88	94.235	Gallus_gallus
ENSGAGG00000007108	YTHDC1	57	67.830	ENSGACG00000015486	ythdc1	57	67.082	Gasterosteus_aculeatus
ENSGAGG00000007108	YTHDC1	93	86.530	ENSGGOG00000021958	YTHDC1	97	85.413	Gorilla_gorilla
ENSGAGG00000007108	YTHDC1	92	54.098	ENSHBUG00000019288	ythdc1	93	58.182	Haplochromis_burtoni
ENSGAGG00000007108	YTHDC1	93	86.726	ENSHGLG00000006319	-	93	86.726	Heterocephalus_glaber_female
ENSGAGG00000007108	YTHDC1	94	68.311	ENSHGLG00000003239	-	86	68.558	Heterocephalus_glaber_female
ENSGAGG00000007108	YTHDC1	93	84.751	ENSHGLG00100001556	-	92	86.677	Heterocephalus_glaber_male
ENSGAGG00000007108	YTHDC1	94	66.667	ENSHGLG00100008060	-	86	67.023	Heterocephalus_glaber_male
ENSGAGG00000007108	YTHDC1	55	70.270	ENSHCOG00000001520	ythdc1	84	63.830	Hippocampus_comes
ENSGAGG00000007108	YTHDC1	92	67.762	ENSIPUG00000018136	ythdc1	92	67.601	Ictalurus_punctatus
ENSGAGG00000007108	YTHDC1	60	96.487	ENSSTOG00000013652	YTHDC1	93	86.237	Ictidomys_tridecemlineatus
ENSGAGG00000007108	YTHDC1	60	95.785	ENSJJAG00000010268	Ythdc1	92	86.486	Jaculus_jaculus
ENSGAGG00000007108	YTHDC1	58	65.542	ENSKMAG00000006483	ythdc1	86	69.639	Kryptolebias_marmoratus
ENSGAGG00000007108	YTHDC1	65	63.971	ENSLBEG00000020831	ythdc1	72	65.909	Labrus_bergylta
ENSGAGG00000007108	YTHDC1	87	72.387	ENSLACG00000004893	YTHDC1	92	72.855	Latimeria_chalumnae
ENSGAGG00000007108	YTHDC1	91	73.134	ENSLOCG00000003045	ythdc1	91	71.713	Lepisosteus_oculatus
ENSGAGG00000007108	YTHDC1	93	87.445	ENSLAFG00000021592	YTHDC1	98	84.575	Loxodonta_africana
ENSGAGG00000007108	YTHDC1	93	86.530	ENSMFAG00000031927	YTHDC1	96	85.385	Macaca_fascicularis
ENSGAGG00000007108	YTHDC1	92	87.240	ENSMMUG00000002265	YTHDC1	92	87.240	Macaca_mulatta
ENSGAGG00000007108	YTHDC1	93	85.505	ENSMNEG00000033751	YTHDC1	96	85.385	Macaca_nemestrina
ENSGAGG00000007108	YTHDC1	93	85.505	ENSMLEG00000042147	YTHDC1	96	85.385	Mandrillus_leucophaeus
ENSGAGG00000007108	YTHDC1	57	67.402	ENSMAMG00000013122	ythdc1	92	57.704	Mastacembelus_armatus
ENSGAGG00000007108	YTHDC1	92	53.949	ENSMZEG00005023173	ythdc1	93	58.182	Maylandia_zebra
ENSGAGG00000007108	YTHDC1	93	92.413	ENSMGAG00000010391	YTHDC1	92	92.413	Meleagris_gallopavo
ENSGAGG00000007108	YTHDC1	93	85.484	ENSMAUG00000001286	Ythdc1	93	86.510	Mesocricetus_auratus
ENSGAGG00000007108	YTHDC1	93	86.765	ENSMICG00000034640	YTHDC1	93	87.059	Microcebus_murinus
ENSGAGG00000007108	YTHDC1	93	86.618	ENSMOCG00000020201	Ythdc1	93	86.618	Microtus_ochrogaster
ENSGAGG00000007108	YTHDC1	76	56.827	ENSMMOG00000021200	ythdc1	93	52.522	Mola_mola
ENSGAGG00000007108	YTHDC1	50	59.412	ENSMODG00000004117	-	92	61.661	Monodelphis_domestica
ENSGAGG00000007108	YTHDC1	66	56.568	ENSMODG00000009173	-	84	60.100	Monodelphis_domestica
ENSGAGG00000007108	YTHDC1	96	49.718	ENSMODG00000010076	-	96	49.779	Monodelphis_domestica
ENSGAGG00000007108	YTHDC1	93	86.425	ENSMODG00000020754	-	92	87.330	Monodelphis_domestica
ENSGAGG00000007108	YTHDC1	96	57.571	ENSMODG00000014337	-	94	70.284	Monodelphis_domestica
ENSGAGG00000007108	YTHDC1	50	74.493	ENSMALG00000013412	ythdc1	94	58.404	Monopterus_albus
ENSGAGG00000007108	YTHDC1	93	85.337	MGP_CAROLIEiJ_G0027347	Ythdc1	93	85.777	Mus_caroli
ENSGAGG00000007108	YTHDC1	93	85.652	ENSMUSG00000035851	Ythdc1	93	85.505	Mus_musculus
ENSGAGG00000007108	YTHDC1	93	85.505	MGP_PahariEiJ_G0017126	Ythdc1	93	85.505	Mus_pahari
ENSGAGG00000007108	YTHDC1	93	85.798	MGP_SPRETEiJ_G0028339	Ythdc1	93	85.652	Mus_spretus
ENSGAGG00000007108	YTHDC1	93	67.930	ENSMPUG00000001743	YTHDC1	70	97.406	Mustela_putorius_furo
ENSGAGG00000007108	YTHDC1	91	86.248	ENSMLUG00000016300	YTHDC1	92	86.099	Myotis_lucifugus
ENSGAGG00000007108	YTHDC1	58	79.384	ENSNGAG00000024000	Ythdc1	93	80.142	Nannospalax_galili
ENSGAGG00000007108	YTHDC1	61	65.528	ENSNBRG00000007663	ythdc1	70	71.750	Neolamprologus_brichardi
ENSGAGG00000007108	YTHDC1	91	86.607	ENSNLEG00000009202	YTHDC1	96	84.586	Nomascus_leucogenys
ENSGAGG00000007108	YTHDC1	71	81.271	ENSMEUG00000007128	YTHDC1	68	81.271	Notamacropus_eugenii
ENSGAGG00000007108	YTHDC1	79	96.034	ENSOPRG00000008986	YTHDC1	74	96.034	Ochotona_princeps
ENSGAGG00000007108	YTHDC1	93	85.398	ENSODEG00000001715	YTHDC1	92	86.756	Octodon_degus
ENSGAGG00000007108	YTHDC1	91	73.529	ENSONIG00000012651	ythdc1	93	58.485	Oreochromis_niloticus
ENSGAGG00000007108	YTHDC1	87	77.364	ENSOANG00000014398	YTHDC1	71	95.493	Ornithorhynchus_anatinus
ENSGAGG00000007108	YTHDC1	93	76.574	ENSOCUG00000015886	YTHDC1	70	97.983	Oryctolagus_cuniculus
ENSGAGG00000007108	YTHDC1	92	55.607	ENSORLG00000030544	ythdc1	94	58.896	Oryzias_latipes
ENSGAGG00000007108	YTHDC1	92	54.893	ENSORLG00020019316	ythdc1	94	58.040	Oryzias_latipes_hni
ENSGAGG00000007108	YTHDC1	92	55.077	ENSOMEG00000000551	ythdc1	94	57.473	Oryzias_melastigma
ENSGAGG00000007108	YTHDC1	93	84.751	ENSOGAG00000003362	YTHDC1	93	84.897	Otolemur_garnettii
ENSGAGG00000007108	YTHDC1	93	84.773	ENSOARG00000008633	YTHDC1	93	84.627	Ovis_aries
ENSGAGG00000007108	YTHDC1	93	86.510	ENSPPAG00000041315	YTHDC1	97	85.769	Pan_paniscus
ENSGAGG00000007108	YTHDC1	93	86.111	ENSPPRG00000011979	YTHDC1	93	86.257	Panthera_pardus
ENSGAGG00000007108	YTHDC1	91	86.499	ENSPTIG00000015527	YTHDC1	93	86.647	Panthera_tigris_altaica
ENSGAGG00000007108	YTHDC1	93	86.510	ENSPTRG00000016105	YTHDC1	97	85.769	Pan_troglodytes
ENSGAGG00000007108	YTHDC1	93	86.530	ENSPANG00000021590	YTHDC1	95	85.385	Papio_anubis
ENSGAGG00000007108	YTHDC1	91	69.094	ENSPKIG00000018497	ythdc1	93	68.960	Paramormyrops_kingsleyae
ENSGAGG00000007108	YTHDC1	99	97.571	ENSPSIG00000002782	YTHDC1	99	97.571	Pelodiscus_sinensis
ENSGAGG00000007108	YTHDC1	54	62.579	ENSPMGG00000000970	-	63	73.333	Periophthalmus_magnuspinnatus
ENSGAGG00000007108	YTHDC1	91	86.905	ENSPEMG00000013850	Ythdc1	92	87.202	Peromyscus_maniculatus_bairdii
ENSGAGG00000007108	YTHDC1	93	86.576	ENSPCIG00000006870	YTHDC1	92	88.383	Phascolarctos_cinereus
ENSGAGG00000007108	YTHDC1	57	65.049	ENSPFOG00000013404	ythdc1	93	57.734	Poecilia_formosa
ENSGAGG00000007108	YTHDC1	57	65.049	ENSPLAG00000011079	ythdc1	85	69.287	Poecilia_latipinna
ENSGAGG00000007108	YTHDC1	57	65.049	ENSPMEG00000009238	ythdc1	93	57.734	Poecilia_mexicana
ENSGAGG00000007108	YTHDC1	68	61.905	ENSPREG00000016973	ythdc1	93	53.492	Poecilia_reticulata
ENSGAGG00000007108	YTHDC1	79	87.201	ENSPPYG00000014726	YTHDC1	91	86.348	Pongo_abelii
ENSGAGG00000007108	YTHDC1	76	88.182	ENSPCAG00000009607	YTHDC1	75	87.727	Procavia_capensis
ENSGAGG00000007108	YTHDC1	93	81.912	ENSPCOG00000019105	YTHDC1	92	82.206	Propithecus_coquereli
ENSGAGG00000007108	YTHDC1	60	91.803	ENSPVAG00000015551	YTHDC1	93	82.799	Pteropus_vampyrus
ENSGAGG00000007108	YTHDC1	92	53.949	ENSPNYG00000011687	ythdc1	93	58.182	Pundamilia_nyererei
ENSGAGG00000007108	YTHDC1	92	68.478	ENSPNAG00000028365	ythdc1	92	68.944	Pygocentrus_nattereri
ENSGAGG00000007108	YTHDC1	60	96.019	ENSRNOG00000001996	Ythdc1	93	85.839	Rattus_norvegicus
ENSGAGG00000007108	YTHDC1	91	86.033	ENSRBIG00000028279	YTHDC1	96	83.846	Rhinopithecus_bieti
ENSGAGG00000007108	YTHDC1	93	85.505	ENSRROG00000035028	YTHDC1	96	85.385	Rhinopithecus_roxellana
ENSGAGG00000007108	YTHDC1	93	86.530	ENSSBOG00000022353	YTHDC1	96	85.385	Saimiri_boliviensis_boliviensis
ENSGAGG00000007108	YTHDC1	91	86.830	ENSSHAG00000002538	YTHDC1	91	88.196	Sarcophilus_harrisii
ENSGAGG00000007108	YTHDC1	92	70.505	ENSSFOG00015003298	ythdc1	92	70.616	Scleropages_formosus
ENSGAGG00000007108	YTHDC1	57	65.625	ENSSMAG00000009086	ythdc1	93	58.321	Scophthalmus_maximus
ENSGAGG00000007108	YTHDC1	92	56.042	ENSSDUG00000022008	ythdc1	93	58.824	Seriola_dumerili
ENSGAGG00000007108	YTHDC1	57	67.322	ENSSLDG00000007926	ythdc1	93	58.824	Seriola_lalandi_dorsalis
ENSGAGG00000007108	YTHDC1	71	87.571	ENSSARG00000010960	YTHDC1	91	87.194	Sorex_araneus
ENSGAGG00000007108	YTHDC1	93	87.801	ENSSPUG00000009357	YTHDC1	94	88.941	Sphenodon_punctatus
ENSGAGG00000007108	YTHDC1	57	67.971	ENSSPAG00000011449	ythdc1	93	59.699	Stegastes_partitus
ENSGAGG00000007108	YTHDC1	60	96.253	ENSSSCG00000035505	YTHDC1	93	85.881	Sus_scrofa
ENSGAGG00000007108	YTHDC1	93	93.475	ENSTGUG00000004452	-	92	93.475	Taeniopygia_guttata
ENSGAGG00000007108	YTHDC1	65	69.231	ENSTRUG00000010142	ythdc1	69	69.231	Takifugu_rubripes
ENSGAGG00000007108	YTHDC1	92	51.835	ENSTNIG00000013243	ythdc1	90	56.132	Tetraodon_nigroviridis
ENSGAGG00000007108	YTHDC1	93	79.167	ENSTBEG00000011546	YTHDC1	92	80.506	Tupaia_belangeri
ENSGAGG00000007108	YTHDC1	60	94.145	ENSTTRG00000005083	YTHDC1	93	84.526	Tursiops_truncatus
ENSGAGG00000007108	YTHDC1	86	85.466	ENSUAMG00000010388	YTHDC1	92	86.491	Ursus_americanus
ENSGAGG00000007108	YTHDC1	91	78.769	ENSUMAG00000013668	YTHDC1	98	78.623	Ursus_maritimus
ENSGAGG00000007108	YTHDC1	92	85.780	ENSVPAG00000009040	YTHDC1	92	85.780	Vicugna_pacos
ENSGAGG00000007108	YTHDC1	91	86.963	ENSVVUG00000005387	YTHDC1	91	86.963	Vulpes_vulpes
ENSGAGG00000007108	YTHDC1	92	78.914	ENSXETG00000017960	ythdc1	92	79.107	Xenopus_tropicalis
ENSGAGG00000007108	YTHDC1	57	64.563	ENSXMAG00000005196	ythdc1	94	56.662	Xiphophorus_maculatus