EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000007230 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 5041 bases
Position: chrPPEB01011963.1:20-5060
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000009151	zf-C2H2	PF00096.26	1.2e-50	1	9
ENSGAGP00000009151	zf-C2H2	PF00096.26	1.2e-50	2	9
ENSGAGP00000009151	zf-C2H2	PF00096.26	1.2e-50	3	9
ENSGAGP00000009151	zf-C2H2	PF00096.26	1.2e-50	4	9
ENSGAGP00000009151	zf-C2H2	PF00096.26	1.2e-50	5	9
ENSGAGP00000009151	zf-C2H2	PF00096.26	1.2e-50	6	9
ENSGAGP00000009151	zf-C2H2	PF00096.26	1.2e-50	7	9
ENSGAGP00000009151	zf-C2H2	PF00096.26	1.2e-50	8	9
ENSGAGP00000009151	zf-C2H2	PF00096.26	1.2e-50	9	9
ENSGAGP00000009151	zf-met	PF12874.7	2.5e-07	1	2
ENSGAGP00000009151	zf-met	PF12874.7	2.5e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000010510	-	1128	-	ENSGAGP00000009151	375 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000007230's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000007230's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000007230	-	89	66.810	ENSGAGG00000001645	-	67	66.810
ENSGAGG00000007230	-	91	68.548	ENSGAGG00000006683	-	95	71.257
ENSGAGG00000007230	-	86	37.931	ENSGAGG00000022571	ZNF319	93	40.925
ENSGAGG00000007230	-	81	45.136	ENSGAGG00000017094	-	52	45.136
ENSGAGG00000007230	-	91	71.747	ENSGAGG00000004740	-	92	69.189
ENSGAGG00000007230	-	91	67.466	ENSGAGG00000014389	-	94	71.125
ENSGAGG00000007230	-	83	64.460	ENSGAGG00000006323	-	97	64.460
ENSGAGG00000007230	-	83	52.581	ENSGAGG00000011366	-	99	52.581
ENSGAGG00000007230	-	95	63.441	ENSGAGG00000016529	-	88	63.441
ENSGAGG00000007230	-	77	65.868	ENSGAGG00000015232	-	68	65.868
ENSGAGG00000007230	-	90	52.962	ENSGAGG00000018445	-	89	53.929
ENSGAGG00000007230	-	75	35.135	ENSGAGG00000020362	PRDM5	67	33.594
ENSGAGG00000007230	-	91	52.978	ENSGAGG00000006846	-	86	53.355
ENSGAGG00000007230	-	79	58.683	ENSGAGG00000006848	-	64	53.846
ENSGAGG00000007230	-	92	60.208	ENSGAGG00000020134	-	66	61.168
ENSGAGG00000007230	-	93	60.744	ENSGAGG00000010324	-	74	61.034
ENSGAGG00000007230	-	78	61.411	ENSGAGG00000011487	-	75	60.417
ENSGAGG00000007230	-	91	62.463	ENSGAGG00000011574	-	87	62.537
ENSGAGG00000007230	-	91	72.330	ENSGAGG00000010833	-	86	71.429
ENSGAGG00000007230	-	95	57.993	ENSGAGG00000009272	-	97	58.079
ENSGAGG00000007230	-	94	52.837	ENSGAGG00000018885	-	77	52.837
ENSGAGG00000007230	-	77	51.497	ENSGAGG00000013021	-	95	51.497
ENSGAGG00000007230	-	82	72.183	ENSGAGG00000019349	-	77	72.183
ENSGAGG00000007230	-	89	49.701	ENSGAGG00000017640	-	63	51.587
ENSGAGG00000007230	-	77	54.011	ENSGAGG00000004926	-	97	54.011
ENSGAGG00000007230	-	92	72.093	ENSGAGG00000014356	-	76	72.434
ENSGAGG00000007230	-	91	65.761	ENSGAGG00000013851	-	86	66.027
ENSGAGG00000007230	-	82	66.558	ENSGAGG00000015451	-	89	66.558
ENSGAGG00000007230	-	91	64.453	ENSGAGG00000002214	-	86	63.701
ENSGAGG00000007230	-	92	70.732	ENSGAGG00000020594	-	95	70.732
ENSGAGG00000007230	-	77	58.974	ENSGAGG00000002828	-	67	58.974
ENSGAGG00000007230	-	96	71.329	ENSGAGG00000006960	-	84	72.188
ENSGAGG00000007230	-	91	62.278	ENSGAGG00000002179	-	92	62.278
ENSGAGG00000007230	-	82	32.143	ENSGAGG00000022082	PRDM15	50	32.143
ENSGAGG00000007230	-	96	47.436	ENSGAGG00000005331	-	97	47.436
ENSGAGG00000007230	-	83	44.643	ENSGAGG00000003883	ZNF236	58	44.643
ENSGAGG00000007230	-	97	56.890	ENSGAGG00000001387	-	58	56.890
ENSGAGG00000007230	-	91	59.924	ENSGAGG00000001469	-	95	59.696
ENSGAGG00000007230	-	76	54.545	ENSGAGG00000011399	-	83	54.545
ENSGAGG00000007230	-	91	73.171	ENSGAGG00000017986	-	97	72.512
ENSGAGG00000007230	-	82	71.895	ENSGAGG00000008773	-	82	71.895
ENSGAGG00000007230	-	91	56.048	ENSGAGG00000005805	-	91	56.048
ENSGAGG00000007230	-	83	65.737	ENSGAGG00000000971	-	91	65.737
ENSGAGG00000007230	-	87	42.248	ENSGAGG00000003095	ZNF865	82	39.016
ENSGAGG00000007230	-	96	63.473	ENSGAGG00000010492	-	94	63.473
ENSGAGG00000007230	-	91	72.069	ENSGAGG00000012452	-	79	71.875
ENSGAGG00000007230	-	83	51.748	ENSGAGG00000020168	-	78	51.748
ENSGAGG00000007230	-	76	71.429	ENSGAGG00000009739	-	99	71.429

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000007230	-	81	52.709	ENSACIG00000011153	-	69	54.264	Amphilophus_citrinellus
ENSGAGG00000007230	-	85	54.724	ENSACIG00000019791	-	92	53.982	Amphilophus_citrinellus
ENSGAGG00000007230	-	83	54.425	ENSANAG00000032414	-	84	54.425	Aotus_nancymaae
ENSGAGG00000007230	-	81	50.000	ENSACLG00000020474	-	92	50.000	Astatotilapia_calliptera
ENSGAGG00000007230	-	75	45.149	ENSACLG00000014167	-	60	45.149	Astatotilapia_calliptera
ENSGAGG00000007230	-	96	47.518	ENSACLG00000017329	-	81	47.518	Astatotilapia_calliptera
ENSGAGG00000007230	-	76	50.000	ENSACLG00000001507	-	79	50.000	Astatotilapia_calliptera
ENSGAGG00000007230	-	77	44.615	ENSACLG00000022499	-	84	44.615	Astatotilapia_calliptera
ENSGAGG00000007230	-	87	60.068	ENSAMXG00000031501	-	88	60.068	Astyanax_mexicanus
ENSGAGG00000007230	-	82	55.814	ENSAMXG00000010078	-	75	57.295	Astyanax_mexicanus
ENSGAGG00000007230	-	80	57.143	ENSAMXG00000038324	-	71	57.143	Astyanax_mexicanus
ENSGAGG00000007230	-	89	61.607	ENSAMXG00000031646	-	98	61.607	Astyanax_mexicanus
ENSGAGG00000007230	-	88	52.857	ENSAMXG00000039770	-	83	50.439	Astyanax_mexicanus
ENSGAGG00000007230	-	82	56.634	ENSAMXG00000039162	-	90	56.634	Astyanax_mexicanus
ENSGAGG00000007230	-	87	53.017	ENSAMXG00000031844	-	92	53.017	Astyanax_mexicanus
ENSGAGG00000007230	-	87	59.375	ENSAMXG00000036849	-	86	59.375	Astyanax_mexicanus
ENSGAGG00000007230	-	84	47.134	ENSCHIG00000015741	-	89	49.110	Capra_hircus
ENSGAGG00000007230	-	77	63.758	ENSCCAG00000035188	-	84	62.887	Cebus_capucinus
ENSGAGG00000007230	-	82	69.565	ENSCPBG00000001258	-	96	69.945	Chrysemys_picta_bellii
ENSGAGG00000007230	-	90	54.448	ENSDNOG00000048084	-	99	54.448	Dasypus_novemcinctus
ENSGAGG00000007230	-	88	54.217	ENSETEG00000002865	-	80	54.217	Echinops_telfairi
ENSGAGG00000007230	-	86	55.556	ENSEBUG00000008157	-	99	55.556	Eptatretus_burgeri
ENSGAGG00000007230	-	91	49.135	ENSEBUG00000011479	-	86	53.279	Eptatretus_burgeri
ENSGAGG00000007230	-	86	52.901	ENSEBUG00000012748	-	78	53.125	Eptatretus_burgeri
ENSGAGG00000007230	-	94	39.695	ENSEBUG00000011582	-	72	50.951	Eptatretus_burgeri
ENSGAGG00000007230	-	83	52.434	ENSECAG00000035557	-	75	52.434	Equus_caballus
ENSGAGG00000007230	-	75	43.617	ENSFHEG00000016184	-	73	43.617	Fundulus_heteroclitus
ENSGAGG00000007230	-	81	46.296	ENSGMOG00000004315	-	99	46.296	Gadus_morhua
ENSGAGG00000007230	-	81	47.107	ENSGACG00000019863	-	98	47.107	Gasterosteus_aculeatus
ENSGAGG00000007230	-	82	53.266	ENSHBUG00000000146	-	78	53.266	Haplochromis_burtoni
ENSGAGG00000007230	-	79	51.625	ENSHBUG00000017372	-	88	51.986	Haplochromis_burtoni
ENSGAGG00000007230	-	96	42.917	ENSHBUG00000006238	-	94	42.917	Haplochromis_burtoni
ENSGAGG00000007230	-	95	50.222	ENSHBUG00000019800	-	96	50.222	Haplochromis_burtoni
ENSGAGG00000007230	-	97	43.110	ENSHBUG00000013264	-	90	43.110	Haplochromis_burtoni
ENSGAGG00000007230	-	79	49.462	ENSHBUG00000021028	-	92	45.985	Haplochromis_burtoni
ENSGAGG00000007230	-	77	52.157	ENSHGLG00000018394	-	94	52.157	Heterocephalus_glaber_female
ENSGAGG00000007230	-	72	58.738	ENSIPUG00000021472	-	77	58.738	Ictalurus_punctatus
ENSGAGG00000007230	-	87	52.862	ENSIPUG00000021527	-	91	56.250	Ictalurus_punctatus
ENSGAGG00000007230	-	82	58.031	ENSIPUG00000021484	-	98	58.031	Ictalurus_punctatus
ENSGAGG00000007230	-	77	53.208	ENSIPUG00000021434	-	93	53.208	Ictalurus_punctatus
ENSGAGG00000007230	-	91	52.683	ENSIPUG00000003960	-	84	52.683	Ictalurus_punctatus
ENSGAGG00000007230	-	86	55.253	ENSIPUG00000015233	-	70	55.253	Ictalurus_punctatus
ENSGAGG00000007230	-	83	58.235	ENSIPUG00000006936	-	78	58.235	Ictalurus_punctatus
ENSGAGG00000007230	-	76	50.968	ENSIPUG00000021518	-	87	52.500	Ictalurus_punctatus
ENSGAGG00000007230	-	76	54.762	ENSIPUG00000013065	-	93	54.491	Ictalurus_punctatus
ENSGAGG00000007230	-	93	57.252	ENSIPUG00000009750	-	93	57.252	Ictalurus_punctatus
ENSGAGG00000007230	-	76	54.709	ENSIPUG00000011073	-	99	54.709	Ictalurus_punctatus
ENSGAGG00000007230	-	96	55.839	ENSIPUG00000022751	-	98	56.429	Ictalurus_punctatus
ENSGAGG00000007230	-	90	54.357	ENSIPUG00000001941	-	83	54.357	Ictalurus_punctatus
ENSGAGG00000007230	-	81	55.556	ENSSTOG00000034297	-	72	55.556	Ictidomys_tridecemlineatus
ENSGAGG00000007230	-	82	63.118	ENSMFAG00000046052	-	85	63.118	Macaca_fascicularis
ENSGAGG00000007230	-	82	63.118	ENSMNEG00000041636	-	85	63.118	Macaca_nemestrina
ENSGAGG00000007230	-	82	63.118	ENSMLEG00000032640	-	85	63.118	Mandrillus_leucophaeus
ENSGAGG00000007230	-	81	45.255	ENSMAMG00000009051	-	91	45.255	Mastacembelus_armatus
ENSGAGG00000007230	-	79	48.239	ENSMZEG00005027285	-	82	48.239	Maylandia_zebra
ENSGAGG00000007230	-	76	50.211	ENSMZEG00005021421	-	95	50.211	Maylandia_zebra
ENSGAGG00000007230	-	78	44.841	ENSMZEG00005020736	-	88	45.714	Maylandia_zebra
ENSGAGG00000007230	-	80	46.809	ENSMZEG00005012737	-	81	46.809	Maylandia_zebra
ENSGAGG00000007230	-	95	42.456	ENSMZEG00005019982	-	95	42.751	Maylandia_zebra
ENSGAGG00000007230	-	77	43.333	ENSMZEG00005027950	-	89	43.333	Maylandia_zebra
ENSGAGG00000007230	-	82	51.056	ENSMALG00000004413	-	93	52.896	Monopterus_albus
ENSGAGG00000007230	-	87	53.077	ENSNBRG00000015873	-	97	55.882	Neolamprologus_brichardi
ENSGAGG00000007230	-	85	46.520	ENSNBRG00000015652	-	90	48.241	Neolamprologus_brichardi
ENSGAGG00000007230	-	75	53.254	ENSNBRG00000013604	-	70	53.254	Neolamprologus_brichardi
ENSGAGG00000007230	-	84	40.755	ENSNBRG00000016603	-	93	41.379	Neolamprologus_brichardi
ENSGAGG00000007230	-	97	45.798	ENSNBRG00000016582	-	84	45.798	Neolamprologus_brichardi
ENSGAGG00000007230	-	87	40.260	ENSONIG00000001834	-	100	40.260	Oreochromis_niloticus
ENSGAGG00000007230	-	76	41.667	ENSONIG00000008953	-	93	41.667	Oreochromis_niloticus
ENSGAGG00000007230	-	80	48.235	ENSONIG00000020516	-	97	48.235	Oreochromis_niloticus
ENSGAGG00000007230	-	79	49.339	ENSONIG00000021124	-	99	49.339	Oreochromis_niloticus
ENSGAGG00000007230	-	80	46.400	ENSONIG00000000122	-	99	46.400	Oreochromis_niloticus
ENSGAGG00000007230	-	78	40.678	ENSONIG00000007931	-	83	40.678	Oreochromis_niloticus
ENSGAGG00000007230	-	84	41.479	ENSONIG00000000093	-	99	41.479	Oreochromis_niloticus
ENSGAGG00000007230	-	87	47.143	ENSONIG00000015166	-	100	47.143	Oreochromis_niloticus
ENSGAGG00000007230	-	92	48.322	ENSORLG00015012951	-	82	46.528	Oryzias_latipes_hsok
ENSGAGG00000007230	-	87	59.091	ENSOGAG00000025289	-	85	59.091	Otolemur_garnettii
ENSGAGG00000007230	-	82	63.118	ENSPANG00000030978	-	89	63.118	Papio_anubis
ENSGAGG00000007230	-	80	51.034	ENSPEMG00000016975	Zfp940	74	51.128	Peromyscus_maniculatus_bairdii
ENSGAGG00000007230	-	82	50.355	ENSPMEG00000004595	-	91	50.355	Poecilia_mexicana
ENSGAGG00000007230	-	76	65.568	ENSPPYG00000009906	-	70	65.568	Pongo_abelii
ENSGAGG00000007230	-	78	43.463	ENSPNYG00000024244	-	92	43.750	Pundamilia_nyererei
ENSGAGG00000007230	-	76	62.162	ENSPNAG00000011625	-	81	62.162	Pygocentrus_nattereri
ENSGAGG00000007230	-	76	61.429	ENSPNAG00000019338	-	92	61.429	Pygocentrus_nattereri
ENSGAGG00000007230	-	82	63.878	ENSSBOG00000029728	-	85	63.878	Saimiri_boliviensis_boliviensis
ENSGAGG00000007230	-	82	64.336	ENSSPUG00000010059	-	89	64.336	Sphenodon_punctatus