EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000007493 (Gene tree)
Gene ID: -
Gene Symbol: RPUSD3
Alias: MGC29784
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 4144 bases
Position: chrPPEB01005482.1:17048-21191
Accession: 28437
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000009472	PseudoU_synth_2	PF00849.22	7.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000010880	RPUSD3-201	2190	-	ENSGAGP00000009472	310 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000007493's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000007493's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000007493	RPUSD3	81	33.942	ENSGAGG00000000132	RPUSD4	52	31.937

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000007493	RPUSD3	82	53.232	ENSG00000156990	RPUSD3	82	57.143	Homo_sapiens
ENSGAGG00000007493	RPUSD3	82	53.992	ENSAMEG00000016227	RPUSD3	74	54.753	Ailuropoda_melanoleuca
ENSGAGG00000007493	RPUSD3	81	64.093	ENSACAG00000009836	RPUSD3	74	62.934	Anolis_carolinensis
ENSGAGG00000007493	RPUSD3	57	52.688	ENSANAG00000019945	-	71	49.735	Aotus_nancymaae
ENSGAGG00000007493	RPUSD3	62	42.439	ENSANAG00000007127	-	78	40.625	Aotus_nancymaae
ENSGAGG00000007493	RPUSD3	51	56.329	ENSANAG00000038118	-	75	56.329	Aotus_nancymaae
ENSGAGG00000007493	RPUSD3	82	54.753	ENSBTAG00000007968	RPUSD3	76	55.133	Bos_taurus
ENSGAGG00000007493	RPUSD3	82	55.133	ENSCAFG00000029733	RPUSD3	74	56.274	Canis_familiaris
ENSGAGG00000007493	RPUSD3	82	55.133	ENSCAFG00020008582	RPUSD3	80	56.274	Canis_lupus_dingo
ENSGAGG00000007493	RPUSD3	82	56.654	ENSCHIG00000026027	RPUSD3	65	58.796	Capra_hircus
ENSGAGG00000007493	RPUSD3	77	54.435	ENSTSYG00000009994	RPUSD3	73	53.441	Carlito_syrichta
ENSGAGG00000007493	RPUSD3	82	55.556	ENSCAPG00000017559	RPUSD3	95	54.854	Cavia_aperea
ENSGAGG00000007493	RPUSD3	84	54.647	ENSCPOG00000037956	RPUSD3	72	52.672	Cavia_porcellus
ENSGAGG00000007493	RPUSD3	95	48.615	ENSCCAG00000029530	RPUSD3	97	47.840	Cebus_capucinus
ENSGAGG00000007493	RPUSD3	82	56.439	ENSCATG00000036939	RPUSD3	75	55.513	Cercocebus_atys
ENSGAGG00000007493	RPUSD3	82	55.682	ENSCSAG00000010506	RPUSD3	75	54.753	Chlorocebus_sabaeus
ENSGAGG00000007493	RPUSD3	79	94.286	ENSCPBG00000008825	RPUSD3	94	94.286	Chrysemys_picta_bellii
ENSGAGG00000007493	RPUSD3	82	56.061	ENSCANG00000040711	RPUSD3	75	55.133	Colobus_angolensis_palliatus
ENSGAGG00000007493	RPUSD3	82	52.290	ENSCGRG00001004923	Rpusd3	72	50.763	Cricetulus_griseus_chok1gshd
ENSGAGG00000007493	RPUSD3	82	52.290	ENSCGRG00000018315	Rpusd3	76	50.763	Cricetulus_griseus_crigri
ENSGAGG00000007493	RPUSD3	82	52.652	ENSDNOG00000039160	RPUSD3	71	52.963	Dasypus_novemcinctus
ENSGAGG00000007493	RPUSD3	96	50.479	ENSDORG00000026827	Rpusd3	99	50.479	Dipodomys_ordii
ENSGAGG00000007493	RPUSD3	82	55.303	ENSETEG00000006538	RPUSD3	74	53.992	Echinops_telfairi
ENSGAGG00000007493	RPUSD3	66	40.094	ENSEBUG00000015605	RPUSD3	69	40.094	Eptatretus_burgeri
ENSGAGG00000007493	RPUSD3	73	57.709	ENSEASG00005014160	RPUSD3	73	56.654	Equus_asinus_asinus
ENSGAGG00000007493	RPUSD3	73	57.709	ENSECAG00000019988	RPUSD3	73	56.654	Equus_caballus
ENSGAGG00000007493	RPUSD3	66	52.113	ENSEEUG00000007353	RPUSD3	60	51.174	Erinaceus_europaeus
ENSGAGG00000007493	RPUSD3	82	54.753	ENSFCAG00000014199	RPUSD3	61	59.259	Felis_catus
ENSGAGG00000007493	RPUSD3	83	58.594	ENSFALG00000012968	RPUSD3	96	58.594	Ficedula_albicollis
ENSGAGG00000007493	RPUSD3	82	55.894	ENSFDAG00000008350	RPUSD3	81	54.373	Fukomys_damarensis
ENSGAGG00000007493	RPUSD3	82	53.232	ENSGGOG00000013120	RPUSD3	75	55.513	Gorilla_gorilla
ENSGAGG00000007493	RPUSD3	82	52.672	ENSHGLG00000011722	RPUSD3	67	52.290	Heterocephalus_glaber_female
ENSGAGG00000007493	RPUSD3	82	52.672	ENSHGLG00100016038	RPUSD3	67	52.290	Heterocephalus_glaber_male
ENSGAGG00000007493	RPUSD3	82	55.303	ENSSTOG00000002125	RPUSD3	74	54.373	Ictidomys_tridecemlineatus
ENSGAGG00000007493	RPUSD3	82	53.992	ENSJJAG00000012679	Rpusd3	76	52.091	Jaculus_jaculus
ENSGAGG00000007493	RPUSD3	82	56.061	ENSLAFG00000017501	RPUSD3	76	55.133	Loxodonta_africana
ENSGAGG00000007493	RPUSD3	82	56.061	ENSMFAG00000032407	RPUSD3	75	55.133	Macaca_fascicularis
ENSGAGG00000007493	RPUSD3	82	56.654	ENSMMUG00000010628	RPUSD3	82	55.513	Macaca_mulatta
ENSGAGG00000007493	RPUSD3	82	56.061	ENSMNEG00000040308	RPUSD3	75	55.133	Macaca_nemestrina
ENSGAGG00000007493	RPUSD3	82	56.439	ENSMLEG00000033940	RPUSD3	75	55.513	Mandrillus_leucophaeus
ENSGAGG00000007493	RPUSD3	82	52.490	ENSMAUG00000015473	Rpusd3	76	50.958	Mesocricetus_auratus
ENSGAGG00000007493	RPUSD3	82	54.924	ENSMICG00000002315	RPUSD3	76	53.992	Microcebus_murinus
ENSGAGG00000007493	RPUSD3	82	53.992	ENSMOCG00000022613	Rpusd3	63	56.944	Microtus_ochrogaster
ENSGAGG00000007493	RPUSD3	82	58.846	ENSMODG00000005210	RPUSD3	69	55.000	Monodelphis_domestica
ENSGAGG00000007493	RPUSD3	82	53.612	MGP_CAROLIEiJ_G0028725	Rpusd3	75	55.721	Mus_caroli
ENSGAGG00000007493	RPUSD3	82	54.753	ENSMUSG00000051169	Rpusd3	74	56.219	Mus_musculus
ENSGAGG00000007493	RPUSD3	82	53.232	MGP_PahariEiJ_G0022476	Rpusd3	75	55.721	Mus_pahari
ENSGAGG00000007493	RPUSD3	82	54.373	MGP_SPRETEiJ_G0029753	Rpusd3	75	56.219	Mus_spretus
ENSGAGG00000007493	RPUSD3	82	55.344	ENSMPUG00000017132	RPUSD3	74	56.489	Mustela_putorius_furo
ENSGAGG00000007493	RPUSD3	82	56.654	ENSMLUG00000006135	RPUSD3	75	55.894	Myotis_lucifugus
ENSGAGG00000007493	RPUSD3	82	53.435	ENSNGAG00000023704	Rpusd3	78	51.908	Nannospalax_galili
ENSGAGG00000007493	RPUSD3	54	54.491	ENSNLEG00000004214	RPUSD3	73	55.128	Nomascus_leucogenys
ENSGAGG00000007493	RPUSD3	82	58.527	ENSMEUG00000013098	-	100	55.426	Notamacropus_eugenii
ENSGAGG00000007493	RPUSD3	69	47.907	ENSOPRG00000002300	RPUSD3	61	47.907	Ochotona_princeps
ENSGAGG00000007493	RPUSD3	82	54.406	ENSODEG00000018137	RPUSD3	90	53.257	Octodon_degus
ENSGAGG00000007493	RPUSD3	82	48.855	ENSOANG00000012081	-	91	48.092	Ornithorhynchus_anatinus
ENSGAGG00000007493	RPUSD3	82	50.923	ENSOCUG00000027885	RPUSD3	78	50.000	Oryctolagus_cuniculus
ENSGAGG00000007493	RPUSD3	82	56.654	ENSOGAG00000012592	RPUSD3	83	55.513	Otolemur_garnettii
ENSGAGG00000007493	RPUSD3	82	57.034	ENSOARG00000005928	RPUSD3	61	59.259	Ovis_aries
ENSGAGG00000007493	RPUSD3	82	52.471	ENSPPAG00000038083	RPUSD3	75	54.753	Pan_paniscus
ENSGAGG00000007493	RPUSD3	82	55.133	ENSPPRG00000024433	RPUSD3	79	52.632	Panthera_pardus
ENSGAGG00000007493	RPUSD3	82	55.513	ENSPTIG00000006828	RPUSD3	63	60.185	Panthera_tigris_altaica
ENSGAGG00000007493	RPUSD3	82	52.471	ENSPTRG00000051760	RPUSD3	75	54.753	Pan_troglodytes
ENSGAGG00000007493	RPUSD3	82	56.439	ENSPANG00000023885	RPUSD3	75	55.513	Papio_anubis
ENSGAGG00000007493	RPUSD3	82	53.232	ENSPEMG00000017245	Rpusd3	76	52.091	Peromyscus_maniculatus_bairdii
ENSGAGG00000007493	RPUSD3	82	58.846	ENSPCIG00000021901	RPUSD3	80	56.569	Phascolarctos_cinereus
ENSGAGG00000007493	RPUSD3	82	53.232	ENSPPYG00000013676	RPUSD3	75	54.373	Pongo_abelii
ENSGAGG00000007493	RPUSD3	82	56.061	ENSPCOG00000018314	RPUSD3	79	51.880	Propithecus_coquereli
ENSGAGG00000007493	RPUSD3	82	54.753	ENSPVAG00000011107	RPUSD3	74	54.753	Pteropus_vampyrus
ENSGAGG00000007493	RPUSD3	96	46.926	ENSRNOG00000009084	Rpusd3	95	46.278	Rattus_norvegicus
ENSGAGG00000007493	RPUSD3	82	56.061	ENSRBIG00000041230	RPUSD3	75	55.133	Rhinopithecus_bieti
ENSGAGG00000007493	RPUSD3	82	56.061	ENSRROG00000043328	RPUSD3	75	55.133	Rhinopithecus_roxellana
ENSGAGG00000007493	RPUSD3	95	48.308	ENSSBOG00000036106	RPUSD3	97	47.531	Saimiri_boliviensis_boliviensis
ENSGAGG00000007493	RPUSD3	82	55.385	ENSSHAG00000015536	RPUSD3	84	51.923	Sarcophilus_harrisii
ENSGAGG00000007493	RPUSD3	69	59.259	ENSSSCG00000011555	RPUSD3	61	59.259	Sus_scrofa
ENSGAGG00000007493	RPUSD3	69	62.617	ENSTGUG00000008744	RPUSD3	92	62.617	Taeniopygia_guttata
ENSGAGG00000007493	RPUSD3	65	55.665	ENSTBEG00000000176	RPUSD3	70	55.665	Tupaia_belangeri
ENSGAGG00000007493	RPUSD3	82	57.034	ENSTTRG00000007544	RPUSD3	74	57.414	Tursiops_truncatus
ENSGAGG00000007493	RPUSD3	82	54.373	ENSUAMG00000011354	RPUSD3	82	55.133	Ursus_americanus
ENSGAGG00000007493	RPUSD3	82	54.373	ENSUMAG00000018830	RPUSD3	74	55.133	Ursus_maritimus
ENSGAGG00000007493	RPUSD3	82	55.133	ENSVVUG00000023735	RPUSD3	76	56.274	Vulpes_vulpes
ENSGAGG00000007493	RPUSD3	83	57.955	ENSXETG00000023546	rpusd3	93	57.576	Xenopus_tropicalis