EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000007807 (Gene tree)
Gene ID: -
Gene Symbol: SSB
Alias: LARP3|La|La/SSB
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 13745 bases
Position: chrPPEB01000197.1:541806-555550
Accession: 11316
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000009926	RRM_1	PF00076.22	1.2e-13	1	1
ENSGAGP00000009928	RRM_1	PF00076.22	1.2e-13	1	1
ENSGAGP00000009926	RRM_3	PF08777.11	6.1e-29	1	1
ENSGAGP00000009928	RRM_3	PF08777.11	6.1e-29	1	1
ENSGAGP00000009926	La	PF05383.17	1.1e-21	1	1
ENSGAGP00000009928	La	PF05383.17	1.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000011401	SSB-202	1392	-	ENSGAGP00000009928	409 (aa)	-	-
ENSGAGT00000011399	SSB-201	1532	-	ENSGAGP00000009926	409 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000007807's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000007807's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000007807	SSB	100	78.240	ENSG00000138385	SSB	100	82.500	Homo_sapiens
ENSGAGG00000007807	SSB	99	57.561	ENSAPOG00000003448	ssb	100	57.317	Acanthochromis_polyacanthus
ENSGAGG00000007807	SSB	100	75.708	ENSAMEG00000010507	SSB	100	74.764	Ailuropoda_melanoleuca
ENSGAGG00000007807	SSB	91	60.160	ENSACIG00000001738	ssb	95	60.109	Amphilophus_citrinellus
ENSGAGG00000007807	SSB	99	57.805	ENSAOCG00000020398	ssb	100	57.561	Amphiprion_ocellaris
ENSGAGG00000007807	SSB	99	58.049	ENSAPEG00000020395	ssb	100	57.805	Amphiprion_percula
ENSGAGG00000007807	SSB	99	60.976	ENSATEG00000016884	ssb	100	60.976	Anabas_testudineus
ENSGAGG00000007807	SSB	100	82.243	ENSAPLG00000006109	SSB	100	80.562	Anas_platyrhynchos
ENSGAGG00000007807	SSB	100	73.659	ENSACAG00000017008	SSB	99	73.659	Anolis_carolinensis
ENSGAGG00000007807	SSB	100	68.949	ENSANAG00000027195	-	100	68.704	Aotus_nancymaae
ENSGAGG00000007807	SSB	99	55.882	ENSACLG00000010798	ssb	100	55.637	Astatotilapia_calliptera
ENSGAGG00000007807	SSB	98	57.946	ENSAMXG00000012606	ssb	100	58.111	Astyanax_mexicanus
ENSGAGG00000007807	SSB	100	78.240	ENSBTAG00000008716	SSB	100	77.995	Bos_taurus
ENSGAGG00000007807	SSB	73	37.171	WBGene00016653	C44E4.4	77	37.582	Caenorhabditis_elegans
ENSGAGG00000007807	SSB	100	77.995	ENSCJAG00000045073	SSB	100	77.751	Callithrix_jacchus
ENSGAGG00000007807	SSB	100	78.537	ENSCAFG00000012418	SSB	100	77.805	Canis_familiaris
ENSGAGG00000007807	SSB	100	78.537	ENSCAFG00020002900	SSB	100	77.805	Canis_lupus_dingo
ENSGAGG00000007807	SSB	100	78.240	ENSCHIG00000022624	-	100	77.995	Capra_hircus
ENSGAGG00000007807	SSB	100	72.616	ENSCHIG00000022196	-	100	72.127	Capra_hircus
ENSGAGG00000007807	SSB	100	77.506	ENSTSYG00000000097	SSB	100	77.262	Carlito_syrichta
ENSGAGG00000007807	SSB	100	79.951	ENSCPOG00000003338	SSB	100	79.707	Cavia_porcellus
ENSGAGG00000007807	SSB	100	79.218	ENSCCAG00000035147	SSB	100	78.240	Cebus_capucinus
ENSGAGG00000007807	SSB	78	71.386	ENSCATG00000036701	SSB	93	70.482	Cercocebus_atys
ENSGAGG00000007807	SSB	100	58.191	ENSCATG00000042909	-	100	57.213	Cercocebus_atys
ENSGAGG00000007807	SSB	100	79.462	ENSCLAG00000015617	-	100	78.484	Chinchilla_lanigera
ENSGAGG00000007807	SSB	100	78.729	ENSCSAG00000015200	SSB	89	77.995	Chlorocebus_sabaeus
ENSGAGG00000007807	SSB	98	71.820	ENSCSAG00000018390	-	100	70.823	Chlorocebus_sabaeus
ENSGAGG00000007807	SSB	100	79.218	ENSCHOG00000007763	SSB	100	78.973	Choloepus_hoffmanni
ENSGAGG00000007807	SSB	100	98.044	ENSCPBG00000006519	SSB	100	98.044	Chrysemys_picta_bellii
ENSGAGG00000007807	SSB	100	78.729	ENSCANG00000027695	SSB	100	77.995	Colobus_angolensis_palliatus
ENSGAGG00000007807	SSB	100	67.482	ENSCANG00000033240	-	100	66.504	Colobus_angolensis_palliatus
ENSGAGG00000007807	SSB	96	61.323	ENSCANG00000028838	-	93	60.814	Colobus_angolensis_palliatus
ENSGAGG00000007807	SSB	100	68.599	ENSCGRG00001024831	Ssb	100	69.565	Cricetulus_griseus_chok1gshd
ENSGAGG00000007807	SSB	100	68.599	ENSCGRG00000005387	Ssb	100	69.565	Cricetulus_griseus_crigri
ENSGAGG00000007807	SSB	98	57.816	ENSCSEG00000011599	ssb	99	56.824	Cynoglossus_semilaevis
ENSGAGG00000007807	SSB	99	59.124	ENSCVAG00000021558	ssb	100	59.367	Cyprinodon_variegatus
ENSGAGG00000007807	SSB	99	61.707	ENSDARG00000029252	ssb	100	61.220	Danio_rerio
ENSGAGG00000007807	SSB	100	79.707	ENSDNOG00000013450	SSB	100	78.729	Dasypus_novemcinctus
ENSGAGG00000007807	SSB	100	72.289	ENSDORG00000005543	Ssb	100	71.325	Dipodomys_ordii
ENSGAGG00000007807	SSB	81	34.402	FBgn0011638	La	54	43.396	Drosophila_melanogaster
ENSGAGG00000007807	SSB	87	50.000	ENSEBUG00000001237	ssb	91	48.732	Eptatretus_burgeri
ENSGAGG00000007807	SSB	100	79.218	ENSEASG00005022835	SSB	100	78.973	Equus_asinus_asinus
ENSGAGG00000007807	SSB	100	79.462	ENSECAG00000018495	SSB	100	79.218	Equus_caballus
ENSGAGG00000007807	SSB	75	64.052	ENSEEUG00000008077	SSB	78	62.745	Erinaceus_europaeus
ENSGAGG00000007807	SSB	99	63.081	ENSELUG00000020929	ssb	100	64.390	Esox_lucius
ENSGAGG00000007807	SSB	100	78.049	ENSFCAG00000011601	SSB	100	78.049	Felis_catus
ENSGAGG00000007807	SSB	100	85.819	ENSFALG00000000930	SSB	100	85.575	Ficedula_albicollis
ENSGAGG00000007807	SSB	100	79.707	ENSFDAG00000000598	SSB	100	78.729	Fukomys_damarensis
ENSGAGG00000007807	SSB	72	58.333	ENSFHEG00000003268	ssb	92	58.389	Fundulus_heteroclitus
ENSGAGG00000007807	SSB	97	56.863	ENSGMOG00000002664	ssb	100	54.300	Gadus_morhua
ENSGAGG00000007807	SSB	100	85.330	ENSGALG00000009677	SSB	100	84.352	Gallus_gallus
ENSGAGG00000007807	SSB	99	58.049	ENSGAFG00000002749	ssb	100	58.293	Gambusia_affinis
ENSGAGG00000007807	SSB	98	56.968	ENSGACG00000005107	ssb	99	56.479	Gasterosteus_aculeatus
ENSGAGG00000007807	SSB	55	76.106	ENSGGOG00000023471	-	95	73.820	Gorilla_gorilla
ENSGAGG00000007807	SSB	100	64.548	ENSGGOG00000024891	-	100	64.303	Gorilla_gorilla
ENSGAGG00000007807	SSB	99	55.882	ENSHBUG00000006584	ssb	100	55.637	Haplochromis_burtoni
ENSGAGG00000007807	SSB	100	71.149	ENSHGLG00000005832	-	100	70.416	Heterocephalus_glaber_female
ENSGAGG00000007807	SSB	100	78.365	ENSHGLG00000017580	-	100	76.202	Heterocephalus_glaber_female
ENSGAGG00000007807	SSB	100	73.479	ENSHGLG00000004478	-	100	72.506	Heterocephalus_glaber_female
ENSGAGG00000007807	SSB	100	78.365	ENSHGLG00100003084	-	100	76.202	Heterocephalus_glaber_male
ENSGAGG00000007807	SSB	100	68.949	ENSHGLG00100008767	-	100	68.949	Heterocephalus_glaber_male
ENSGAGG00000007807	SSB	98	57.606	ENSHCOG00000019011	ssb	99	57.107	Hippocampus_comes
ENSGAGG00000007807	SSB	99	61.408	ENSIPUG00000003681	SSB	100	61.408	Ictalurus_punctatus
ENSGAGG00000007807	SSB	100	78.484	ENSSTOG00000008416	SSB	100	78.240	Ictidomys_tridecemlineatus
ENSGAGG00000007807	SSB	100	66.745	ENSJJAG00000023158	-	100	65.105	Jaculus_jaculus
ENSGAGG00000007807	SSB	99	55.911	ENSJJAG00000016250	-	99	55.665	Jaculus_jaculus
ENSGAGG00000007807	SSB	99	58.537	ENSKMAG00000017317	ssb	99	57.816	Kryptolebias_marmoratus
ENSGAGG00000007807	SSB	99	58.293	ENSLBEG00000017345	ssb	100	58.780	Labrus_bergylta
ENSGAGG00000007807	SSB	99	69.118	ENSLACG00000014056	SSB	99	69.363	Latimeria_chalumnae
ENSGAGG00000007807	SSB	97	71.322	ENSLOCG00000007933	ssb	98	71.216	Lepisosteus_oculatus
ENSGAGG00000007807	SSB	74	59.934	ENSLAFG00000026721	-	99	59.934	Loxodonta_africana
ENSGAGG00000007807	SSB	100	66.504	ENSLAFG00000028909	-	100	66.259	Loxodonta_africana
ENSGAGG00000007807	SSB	100	73.882	ENSLAFG00000000867	-	100	73.005	Loxodonta_africana
ENSGAGG00000007807	SSB	87	68.908	ENSMFAG00000041478	-	100	68.067	Macaca_fascicularis
ENSGAGG00000007807	SSB	100	78.729	ENSMFAG00000039066	SSB	100	77.995	Macaca_fascicularis
ENSGAGG00000007807	SSB	100	67.237	ENSMMUG00000011724	-	97	65.281	Macaca_mulatta
ENSGAGG00000007807	SSB	100	78.729	ENSMMUG00000023051	SSB	100	77.995	Macaca_mulatta
ENSGAGG00000007807	SSB	99	54.791	ENSMMUG00000039889	-	100	53.808	Macaca_mulatta
ENSGAGG00000007807	SSB	100	68.049	ENSMNEG00000028321	SSB	100	68.049	Macaca_nemestrina
ENSGAGG00000007807	SSB	87	68.908	ENSMNEG00000034698	-	100	68.067	Macaca_nemestrina
ENSGAGG00000007807	SSB	100	78.729	ENSMLEG00000035717	SSB	100	77.995	Mandrillus_leucophaeus
ENSGAGG00000007807	SSB	100	56.235	ENSMLEG00000042644	-	100	53.790	Mandrillus_leucophaeus
ENSGAGG00000007807	SSB	99	60.000	ENSMAMG00000004800	ssb	100	60.000	Mastacembelus_armatus
ENSGAGG00000007807	SSB	99	55.882	ENSMZEG00005005749	ssb	100	55.637	Maylandia_zebra
ENSGAGG00000007807	SSB	100	85.575	ENSMGAG00000010328	SSB	100	85.086	Meleagris_gallopavo
ENSGAGG00000007807	SSB	98	72.319	ENSMICG00000033304	-	93	76.648	Microcebus_murinus
ENSGAGG00000007807	SSB	99	79.853	ENSMICG00000028252	-	99	79.607	Microcebus_murinus
ENSGAGG00000007807	SSB	100	64.303	ENSMODG00000019271	-	100	62.347	Monodelphis_domestica
ENSGAGG00000007807	SSB	100	73.986	ENSMODG00000008227	-	100	74.702	Monodelphis_domestica
ENSGAGG00000007807	SSB	100	62.592	ENSMODG00000007027	-	100	61.858	Monodelphis_domestica
ENSGAGG00000007807	SSB	89	58.537	ENSMALG00000008045	ssb	88	61.580	Monopterus_albus
ENSGAGG00000007807	SSB	100	67.765	MGP_CAROLIEiJ_G0023629	-	100	77.717	Mus_caroli
ENSGAGG00000007807	SSB	100	67.059	ENSMUSG00000068882	Ssb	100	77.717	Mus_musculus
ENSGAGG00000007807	SSB	100	67.059	MGP_PahariEiJ_G0025081	-	100	77.174	Mus_pahari
ENSGAGG00000007807	SSB	100	67.059	MGP_SPRETEiJ_G0024551	Ssb	100	77.717	Mus_spretus
ENSGAGG00000007807	SSB	100	78.729	ENSMPUG00000000785	SSB	100	78.729	Mustela_putorius_furo
ENSGAGG00000007807	SSB	100	75.000	ENSMLUG00000016316	SSB	100	74.528	Myotis_lucifugus
ENSGAGG00000007807	SSB	99	55.637	ENSNBRG00000012661	ssb	100	55.147	Neolamprologus_brichardi
ENSGAGG00000007807	SSB	100	57.702	ENSNLEG00000028754	-	100	56.585	Nomascus_leucogenys
ENSGAGG00000007807	SSB	100	78.729	ENSNLEG00000004958	SSB	100	77.995	Nomascus_leucogenys
ENSGAGG00000007807	SSB	61	84.677	ENSMEUG00000001650	-	100	84.677	Notamacropus_eugenii
ENSGAGG00000007807	SSB	53	82.581	ENSOPRG00000008475	-	100	59.864	Ochotona_princeps
ENSGAGG00000007807	SSB	93	76.115	ENSODEG00000004202	-	99	75.328	Octodon_degus
ENSGAGG00000007807	SSB	99	56.618	ENSONIG00000008776	ssb	100	56.127	Oreochromis_niloticus
ENSGAGG00000007807	SSB	100	81.174	ENSOANG00000008543	SSB	100	80.196	Ornithorhynchus_anatinus
ENSGAGG00000007807	SSB	100	78.729	ENSOCUG00000010396	SSB	100	78.484	Oryctolagus_cuniculus
ENSGAGG00000007807	SSB	99	58.780	ENSORLG00000017208	ssb	100	58.537	Oryzias_latipes
ENSGAGG00000007807	SSB	99	58.537	ENSORLG00020022574	ssb	100	58.780	Oryzias_latipes_hni
ENSGAGG00000007807	SSB	99	58.780	ENSORLG00015016592	ssb	100	58.293	Oryzias_latipes_hsok
ENSGAGG00000007807	SSB	99	59.413	ENSOMEG00000003193	ssb	100	60.147	Oryzias_melastigma
ENSGAGG00000007807	SSB	100	73.944	ENSOGAG00000029768	SSB	100	71.596	Otolemur_garnettii
ENSGAGG00000007807	SSB	100	78.484	ENSOARG00000002906	SSB	100	78.240	Ovis_aries
ENSGAGG00000007807	SSB	89	64.641	ENSPPAG00000006189	-	93	59.290	Pan_paniscus
ENSGAGG00000007807	SSB	100	78.240	ENSPPAG00000042673	SSB	100	78.240	Pan_paniscus
ENSGAGG00000007807	SSB	100	63.570	ENSPPAG00000032427	-	100	72.868	Pan_paniscus
ENSGAGG00000007807	SSB	100	78.049	ENSPPRG00000006599	SSB	100	78.049	Panthera_pardus
ENSGAGG00000007807	SSB	100	78.049	ENSPTIG00000011021	SSB	97	78.049	Panthera_tigris_altaica
ENSGAGG00000007807	SSB	100	78.240	ENSPTRG00000012620	SSB	100	78.240	Pan_troglodytes
ENSGAGG00000007807	SSB	100	60.391	ENSPTRG00000042880	-	100	57.908	Pan_troglodytes
ENSGAGG00000007807	SSB	100	57.213	ENSPANG00000034126	-	100	52.844	Papio_anubis
ENSGAGG00000007807	SSB	98	55.087	ENSPANG00000031877	-	95	52.854	Papio_anubis
ENSGAGG00000007807	SSB	100	78.729	ENSPANG00000007440	SSB	100	77.995	Papio_anubis
ENSGAGG00000007807	SSB	99	66.259	ENSPKIG00000019325	ssb	99	66.259	Paramormyrops_kingsleyae
ENSGAGG00000007807	SSB	100	92.421	ENSPSIG00000002265	SSB	93	92.421	Pelodiscus_sinensis
ENSGAGG00000007807	SSB	86	56.863	ENSPMGG00000020075	ssb	90	57.349	Periophthalmus_magnuspinnatus
ENSGAGG00000007807	SSB	99	47.086	ENSPMAG00000002982	ssb	100	46.154	Petromyzon_marinus
ENSGAGG00000007807	SSB	100	77.805	ENSPCIG00000028591	-	100	78.293	Phascolarctos_cinereus
ENSGAGG00000007807	SSB	99	59.024	ENSPFOG00000009650	ssb	100	58.537	Poecilia_formosa
ENSGAGG00000007807	SSB	99	58.780	ENSPLAG00000020498	ssb	100	58.537	Poecilia_latipinna
ENSGAGG00000007807	SSB	99	58.780	ENSPMEG00000001051	ssb	100	58.780	Poecilia_mexicana
ENSGAGG00000007807	SSB	91	60.263	ENSPREG00000003708	ssb	96	60.598	Poecilia_reticulata
ENSGAGG00000007807	SSB	100	78.729	ENSPPYG00000012919	SSB	100	77.995	Pongo_abelii
ENSGAGG00000007807	SSB	95	76.744	ENSPCAG00000010276	SSB	100	75.711	Procavia_capensis
ENSGAGG00000007807	SSB	100	76.284	ENSPCOG00000015741	-	100	75.550	Propithecus_coquereli
ENSGAGG00000007807	SSB	100	70.171	ENSPCOG00000023189	-	100	69.438	Propithecus_coquereli
ENSGAGG00000007807	SSB	86	81.429	ENSPVAG00000006615	SSB	97	82.164	Pteropus_vampyrus
ENSGAGG00000007807	SSB	99	55.882	ENSPNYG00000006444	ssb	100	55.637	Pundamilia_nyererei
ENSGAGG00000007807	SSB	98	59.852	ENSPNAG00000011708	ssb	100	60.000	Pygocentrus_nattereri
ENSGAGG00000007807	SSB	100	66.588	ENSRNOG00000007998	Ssb	100	65.647	Rattus_norvegicus
ENSGAGG00000007807	SSB	100	66.990	ENSRNOG00000011606	AABR07061825.1	100	66.262	Rattus_norvegicus
ENSGAGG00000007807	SSB	100	66.667	ENSRBIG00000041972	SSB	88	80.870	Rhinopithecus_bieti
ENSGAGG00000007807	SSB	89	72.131	ENSRBIG00000041608	-	98	69.399	Rhinopithecus_bieti
ENSGAGG00000007807	SSB	100	55.854	ENSRBIG00000029918	-	100	56.829	Rhinopithecus_bieti
ENSGAGG00000007807	SSB	94	66.319	ENSRBIG00000041232	-	98	65.274	Rhinopithecus_bieti
ENSGAGG00000007807	SSB	98	67.000	ENSRROG00000031684	-	100	66.000	Rhinopithecus_roxellana
ENSGAGG00000007807	SSB	100	64.878	ENSRROG00000007149	-	100	64.390	Rhinopithecus_roxellana
ENSGAGG00000007807	SSB	100	78.729	ENSRROG00000040346	SSB	100	77.995	Rhinopithecus_roxellana
ENSGAGG00000007807	SSB	89	75.683	ENSRROG00000034102	-	97	70.500	Rhinopithecus_roxellana
ENSGAGG00000007807	SSB	100	78.484	ENSSBOG00000027204	SSB	100	78.240	Saimiri_boliviensis_boliviensis
ENSGAGG00000007807	SSB	100	77.317	ENSSHAG00000018062	SSB	100	78.293	Sarcophilus_harrisii
ENSGAGG00000007807	SSB	99	66.828	ENSSFOG00015000550	ssb	100	67.312	Scleropages_formosus
ENSGAGG00000007807	SSB	98	55.583	ENSSMAG00000013885	ssb	98	60.705	Scophthalmus_maximus
ENSGAGG00000007807	SSB	99	60.244	ENSSDUG00000020117	ssb	100	60.244	Seriola_dumerili
ENSGAGG00000007807	SSB	99	57.740	ENSSLDG00000002525	ssb	100	57.494	Seriola_lalandi_dorsalis
ENSGAGG00000007807	SSB	95	73.127	ENSSARG00000007747	SSB	100	72.868	Sorex_araneus
ENSGAGG00000007807	SSB	100	86.797	ENSSPUG00000012112	SSB	100	86.553	Sphenodon_punctatus
ENSGAGG00000007807	SSB	98	57.389	ENSSPAG00000005696	ssb	100	57.317	Stegastes_partitus
ENSGAGG00000007807	SSB	89	70.219	ENSSSCG00000015938	SSB	91	69.505	Sus_scrofa
ENSGAGG00000007807	SSB	100	85.330	ENSTGUG00000007942	SSB	100	85.330	Taeniopygia_guttata
ENSGAGG00000007807	SSB	99	58.824	ENSTRUG00000017839	ssb	100	56.934	Takifugu_rubripes
ENSGAGG00000007807	SSB	89	60.870	ENSTNIG00000000915	ssb	99	59.249	Tetraodon_nigroviridis
ENSGAGG00000007807	SSB	83	80.870	ENSTBEG00000009056	SSB	82	80.870	Tupaia_belangeri
ENSGAGG00000007807	SSB	100	78.049	ENSTTRG00000002152	SSB	100	77.073	Tursiops_truncatus
ENSGAGG00000007807	SSB	92	80.423	ENSUAMG00000027833	SSB	96	81.868	Ursus_americanus
ENSGAGG00000007807	SSB	100	78.780	ENSUMAG00000013907	SSB	100	78.049	Ursus_maritimus
ENSGAGG00000007807	SSB	100	78.973	ENSVPAG00000007183	SSB	100	78.729	Vicugna_pacos
ENSGAGG00000007807	SSB	100	78.537	ENSVVUG00000016573	SSB	78	77.805	Vulpes_vulpes
ENSGAGG00000007807	SSB	100	60.514	ENSXETG00000025402	ssb	100	60.280	Xenopus_tropicalis
ENSGAGG00000007807	SSB	91	58.311	ENSXCOG00000019109	ssb	93	64.062	Xiphophorus_couchianus
ENSGAGG00000007807	SSB	99	58.838	ENSXMAG00000004888	ssb	100	58.537	Xiphophorus_maculatus