EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000008287 (Gene tree)
Gene ID: -
Gene Symbol: CPSF2
Alias: CPSF100|KIAA1367
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 27380 bases
Position: chrPPEB01007743.1:24314-51693
Accession: 2325
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000010611	Beta-Casp	PF10996.8	2.9e-20	1	1
ENSGAGP00000010614	Beta-Casp	PF10996.8	3e-20	1	1
ENSGAGP00000010611	Lactamase_B	PF00753.27	3.7e-05	1	1
ENSGAGP00000010614	Lactamase_B	PF00753.27	3.9e-05	1	1
ENSGAGP00000010611	RMMBL	PF07521.12	2e-14	1	1
ENSGAGP00000010614	RMMBL	PF07521.12	2.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000012176	CPSF2-202	3314	-	ENSGAGP00000010614	783 (aa)	-	UPI000CEFAC70
ENSGAGT00000012173	CPSF2-201	4062	-	ENSGAGP00000010611	758 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000008287's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000008287's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000008287	CPSF2	100	96.424	ENSG00000165934	CPSF2	100	96.424	Homo_sapiens
ENSGAGG00000008287	CPSF2	100	85.425	ENSAPOG00000001242	cpsf2	100	85.425	Acanthochromis_polyacanthus
ENSGAGG00000008287	CPSF2	50	97.375	ENSAMEG00000014835	-	100	97.375	Ailuropoda_melanoleuca
ENSGAGG00000008287	CPSF2	100	85.316	ENSACIG00000009331	cpsf2	100	85.316	Amphilophus_citrinellus
ENSGAGG00000008287	CPSF2	100	85.425	ENSAOCG00000014095	cpsf2	100	85.425	Amphiprion_ocellaris
ENSGAGG00000008287	CPSF2	100	85.425	ENSAPEG00000009158	cpsf2	100	85.425	Amphiprion_percula
ENSGAGG00000008287	CPSF2	99	86.107	ENSATEG00000017644	cpsf2	100	83.806	Anabas_testudineus
ENSGAGG00000008287	CPSF2	100	97.707	ENSAPLG00000006330	CPSF2	100	97.707	Anas_platyrhynchos
ENSGAGG00000008287	CPSF2	100	95.785	ENSACAG00000009245	CPSF2	100	95.785	Anolis_carolinensis
ENSGAGG00000008287	CPSF2	100	96.424	ENSANAG00000022915	CPSF2	100	96.424	Aotus_nancymaae
ENSGAGG00000008287	CPSF2	100	85.896	ENSAMXG00000018696	cpsf2	100	85.896	Astyanax_mexicanus
ENSGAGG00000008287	CPSF2	100	96.679	ENSBTAG00000010227	CPSF2	100	96.679	Bos_taurus
ENSGAGG00000008287	CPSF2	100	41.101	WBGene00017313	cpsf-2	100	40.749	Caenorhabditis_elegans
ENSGAGG00000008287	CPSF2	100	96.424	ENSCJAG00000018069	CPSF2	100	96.424	Callithrix_jacchus
ENSGAGG00000008287	CPSF2	100	96.552	ENSCAFG00000010909	CPSF2	100	96.552	Canis_familiaris
ENSGAGG00000008287	CPSF2	100	96.552	ENSCAFG00020020670	CPSF2	100	96.552	Canis_lupus_dingo
ENSGAGG00000008287	CPSF2	100	96.679	ENSCHIG00000023848	CPSF2	100	96.679	Capra_hircus
ENSGAGG00000008287	CPSF2	100	95.913	ENSTSYG00000009036	CPSF2	100	95.913	Carlito_syrichta
ENSGAGG00000008287	CPSF2	100	96.679	ENSCPOG00000010899	CPSF2	100	96.679	Cavia_porcellus
ENSGAGG00000008287	CPSF2	100	96.424	ENSCCAG00000028088	CPSF2	100	96.424	Cebus_capucinus
ENSGAGG00000008287	CPSF2	100	96.552	ENSCATG00000030132	CPSF2	100	96.552	Cercocebus_atys
ENSGAGG00000008287	CPSF2	100	96.552	ENSCLAG00000012404	CPSF2	100	96.552	Chinchilla_lanigera
ENSGAGG00000008287	CPSF2	100	96.552	ENSCSAG00000011300	CPSF2	100	96.552	Chlorocebus_sabaeus
ENSGAGG00000008287	CPSF2	100	90.166	ENSCHOG00000012904	CPSF2	100	90.166	Choloepus_hoffmanni
ENSGAGG00000008287	CPSF2	100	99.872	ENSCPBG00000008766	CPSF2	97	99.872	Chrysemys_picta_bellii
ENSGAGG00000008287	CPSF2	100	54.625	ENSCING00000007881	-	100	54.250	Ciona_intestinalis
ENSGAGG00000008287	CPSF2	94	96.453	ENSCANG00000041651	CPSF2	100	96.453	Colobus_angolensis_palliatus
ENSGAGG00000008287	CPSF2	100	96.424	ENSCGRG00001006901	Cpsf2	100	96.424	Cricetulus_griseus_chok1gshd
ENSGAGG00000008287	CPSF2	100	96.424	ENSCGRG00000012416	Cpsf2	100	96.424	Cricetulus_griseus_crigri
ENSGAGG00000008287	CPSF2	100	83.777	ENSCSEG00000004116	cpsf2	100	83.777	Cynoglossus_semilaevis
ENSGAGG00000008287	CPSF2	100	85.171	ENSCVAG00000000095	cpsf2	100	85.298	Cyprinodon_variegatus
ENSGAGG00000008287	CPSF2	100	85.696	ENSDARG00000028971	cpsf2	100	85.696	Danio_rerio
ENSGAGG00000008287	CPSF2	100	96.807	ENSDNOG00000042757	CPSF2	100	96.807	Dasypus_novemcinctus
ENSGAGG00000008287	CPSF2	100	96.296	ENSDORG00000013709	Cpsf2	100	96.296	Dipodomys_ordii
ENSGAGG00000008287	CPSF2	100	52.927	FBgn0027873	Cpsf100	100	52.684	Drosophila_melanogaster
ENSGAGG00000008287	CPSF2	100	87.500	ENSETEG00000012123	CPSF2	100	87.500	Echinops_telfairi
ENSGAGG00000008287	CPSF2	54	76.961	ENSEBUG00000012098	cpsf2	93	76.961	Eptatretus_burgeri
ENSGAGG00000008287	CPSF2	91	96.246	ENSEASG00005021193	CPSF2	100	96.246	Equus_asinus_asinus
ENSGAGG00000008287	CPSF2	100	96.424	ENSECAG00000023935	CPSF2	100	96.424	Equus_caballus
ENSGAGG00000008287	CPSF2	100	84.818	ENSELUG00000008442	cpsf2	100	84.818	Esox_lucius
ENSGAGG00000008287	CPSF2	100	96.424	ENSFCAG00000007886	CPSF2	100	96.424	Felis_catus
ENSGAGG00000008287	CPSF2	100	97.957	ENSFALG00000002412	CPSF2	100	97.957	Ficedula_albicollis
ENSGAGG00000008287	CPSF2	100	96.552	ENSFDAG00000006327	CPSF2	100	96.552	Fukomys_damarensis
ENSGAGG00000008287	CPSF2	100	84.585	ENSFHEG00000015465	cpsf2	99	84.845	Fundulus_heteroclitus
ENSGAGG00000008287	CPSF2	100	83.733	ENSGMOG00000008761	cpsf2	100	83.733	Gadus_morhua
ENSGAGG00000008287	CPSF2	100	97.446	ENSGALG00000010783	CPSF2	100	97.446	Gallus_gallus
ENSGAGG00000008287	CPSF2	100	85.171	ENSGAFG00000001407	cpsf2	100	85.171	Gambusia_affinis
ENSGAGG00000008287	CPSF2	100	85.044	ENSGACG00000008418	cpsf2	100	85.044	Gasterosteus_aculeatus
ENSGAGG00000008287	CPSF2	100	96.424	ENSGGOG00000011799	CPSF2	100	96.424	Gorilla_gorilla
ENSGAGG00000008287	CPSF2	100	85.044	ENSHBUG00000023466	cpsf2	100	85.044	Haplochromis_burtoni
ENSGAGG00000008287	CPSF2	100	96.679	ENSHGLG00000018311	CPSF2	100	96.679	Heterocephalus_glaber_female
ENSGAGG00000008287	CPSF2	100	96.679	ENSHGLG00100016460	CPSF2	100	96.679	Heterocephalus_glaber_male
ENSGAGG00000008287	CPSF2	100	84.791	ENSHCOG00000019527	cpsf2	98	84.791	Hippocampus_comes
ENSGAGG00000008287	CPSF2	100	85.896	ENSIPUG00000020857	cpsf2	100	85.896	Ictalurus_punctatus
ENSGAGG00000008287	CPSF2	100	96.552	ENSSTOG00000009528	CPSF2	100	96.552	Ictidomys_tridecemlineatus
ENSGAGG00000008287	CPSF2	100	96.679	ENSJJAG00000017925	Cpsf2	100	96.679	Jaculus_jaculus
ENSGAGG00000008287	CPSF2	100	84.284	ENSKMAG00000019429	cpsf2	100	84.284	Kryptolebias_marmoratus
ENSGAGG00000008287	CPSF2	95	84.739	ENSLBEG00000011585	cpsf2	100	84.492	Labrus_bergylta
ENSGAGG00000008287	CPSF2	100	89.527	ENSLACG00000019024	CPSF2	100	90.294	Latimeria_chalumnae
ENSGAGG00000008287	CPSF2	100	87.833	ENSLOCG00000014102	cpsf2	100	87.833	Lepisosteus_oculatus
ENSGAGG00000008287	CPSF2	100	96.306	ENSLAFG00000004891	CPSF2	100	96.306	Loxodonta_africana
ENSGAGG00000008287	CPSF2	100	96.552	ENSMFAG00000041212	CPSF2	100	96.552	Macaca_fascicularis
ENSGAGG00000008287	CPSF2	100	96.552	ENSMMUG00000000699	CPSF2	100	96.552	Macaca_mulatta
ENSGAGG00000008287	CPSF2	100	96.552	ENSMNEG00000031584	CPSF2	100	96.552	Macaca_nemestrina
ENSGAGG00000008287	CPSF2	100	96.552	ENSMLEG00000029394	CPSF2	100	96.552	Mandrillus_leucophaeus
ENSGAGG00000008287	CPSF2	100	85.425	ENSMAMG00000004235	cpsf2	100	85.425	Mastacembelus_armatus
ENSGAGG00000008287	CPSF2	100	85.171	ENSMZEG00005001769	cpsf2	100	85.171	Maylandia_zebra
ENSGAGG00000008287	CPSF2	100	97.449	ENSMGAG00000013122	CPSF2	100	97.449	Meleagris_gallopavo
ENSGAGG00000008287	CPSF2	100	96.552	ENSMAUG00000015160	Cpsf2	100	96.552	Mesocricetus_auratus
ENSGAGG00000008287	CPSF2	100	96.679	ENSMICG00000016441	CPSF2	100	96.679	Microcebus_murinus
ENSGAGG00000008287	CPSF2	100	96.424	ENSMOCG00000015372	Cpsf2	100	96.424	Microtus_ochrogaster
ENSGAGG00000008287	CPSF2	100	81.242	ENSMMOG00000015590	cpsf2	100	81.242	Mola_mola
ENSGAGG00000008287	CPSF2	100	97.190	ENSMODG00000002042	CPSF2	100	97.190	Monodelphis_domestica
ENSGAGG00000008287	CPSF2	100	82.636	ENSMALG00000022275	cpsf2	100	82.636	Monopterus_albus
ENSGAGG00000008287	CPSF2	100	95.530	ENSMUSG00000041781	Cpsf2	100	95.530	Mus_musculus
ENSGAGG00000008287	CPSF2	100	95.785	MGP_PahariEiJ_G0029791	Cpsf2	100	95.785	Mus_pahari
ENSGAGG00000008287	CPSF2	100	95.530	MGP_SPRETEiJ_G0018877	Cpsf2	100	95.530	Mus_spretus
ENSGAGG00000008287	CPSF2	100	96.552	ENSMPUG00000007617	CPSF2	98	96.552	Mustela_putorius_furo
ENSGAGG00000008287	CPSF2	100	96.296	ENSMLUG00000005570	CPSF2	100	96.296	Myotis_lucifugus
ENSGAGG00000008287	CPSF2	100	96.552	ENSNGAG00000020312	Cpsf2	100	96.552	Nannospalax_galili
ENSGAGG00000008287	CPSF2	100	85.316	ENSNBRG00000022402	cpsf2	100	85.316	Neolamprologus_brichardi
ENSGAGG00000008287	CPSF2	100	95.530	ENSNLEG00000017132	CPSF2	100	95.530	Nomascus_leucogenys
ENSGAGG00000008287	CPSF2	91	99.029	ENSMEUG00000008138	CPSF2	91	99.029	Notamacropus_eugenii
ENSGAGG00000008287	CPSF2	87	97.333	ENSOPRG00000008484	-	93	97.333	Ochotona_princeps
ENSGAGG00000008287	CPSF2	100	96.552	ENSODEG00000008682	CPSF2	100	96.552	Octodon_degus
ENSGAGG00000008287	CPSF2	100	85.551	ENSONIG00000005901	cpsf2	100	85.551	Oreochromis_niloticus
ENSGAGG00000008287	CPSF2	100	96.424	ENSOANG00000003822	CPSF2	100	96.424	Ornithorhynchus_anatinus
ENSGAGG00000008287	CPSF2	100	96.679	ENSOCUG00000005713	CPSF2	100	96.679	Oryctolagus_cuniculus
ENSGAGG00000008287	CPSF2	100	79.721	ENSORLG00000011628	cpsf2	100	79.721	Oryzias_latipes
ENSGAGG00000008287	CPSF2	100	84.664	ENSORLG00020016980	cpsf2	100	84.664	Oryzias_latipes_hni
ENSGAGG00000008287	CPSF2	100	84.664	ENSORLG00015011910	cpsf2	100	84.664	Oryzias_latipes_hsok
ENSGAGG00000008287	CPSF2	100	84.157	ENSOMEG00000022876	cpsf2	100	84.284	Oryzias_melastigma
ENSGAGG00000008287	CPSF2	100	93.631	ENSOARG00000012889	CPSF2	100	93.631	Ovis_aries
ENSGAGG00000008287	CPSF2	100	96.424	ENSPPAG00000039666	CPSF2	100	96.424	Pan_paniscus
ENSGAGG00000008287	CPSF2	99	96.419	ENSPPRG00000010869	CPSF2	100	96.419	Panthera_pardus
ENSGAGG00000008287	CPSF2	100	96.424	ENSPTIG00000021202	CPSF2	100	96.424	Panthera_tigris_altaica
ENSGAGG00000008287	CPSF2	100	96.424	ENSPTRG00000006651	CPSF2	100	96.424	Pan_troglodytes
ENSGAGG00000008287	CPSF2	100	96.552	ENSPANG00000017417	CPSF2	100	96.552	Papio_anubis
ENSGAGG00000008287	CPSF2	100	81.321	ENSPKIG00000021453	cpsf2	100	81.321	Paramormyrops_kingsleyae
ENSGAGG00000008287	CPSF2	100	98.723	ENSPSIG00000006289	CPSF2	100	98.723	Pelodiscus_sinensis
ENSGAGG00000008287	CPSF2	76	79.236	ENSPMGG00000002511	cpsf2	100	79.402	Periophthalmus_magnuspinnatus
ENSGAGG00000008287	CPSF2	100	96.552	ENSPEMG00000007917	Cpsf2	100	96.552	Peromyscus_maniculatus_bairdii
ENSGAGG00000008287	CPSF2	100	73.611	ENSPMAG00000006205	cpsf2	100	73.611	Petromyzon_marinus
ENSGAGG00000008287	CPSF2	100	97.190	ENSPCIG00000011393	CPSF2	100	97.190	Phascolarctos_cinereus
ENSGAGG00000008287	CPSF2	100	85.171	ENSPFOG00000018648	cpsf2	100	85.171	Poecilia_formosa
ENSGAGG00000008287	CPSF2	100	85.171	ENSPLAG00000019199	cpsf2	99	85.171	Poecilia_latipinna
ENSGAGG00000008287	CPSF2	99	85.564	ENSPMEG00000012100	cpsf2	100	84.759	Poecilia_mexicana
ENSGAGG00000008287	CPSF2	100	85.171	ENSPREG00000008960	cpsf2	100	85.171	Poecilia_reticulata
ENSGAGG00000008287	CPSF2	63	95.171	ENSPPYG00000029685	-	100	95.171	Pongo_abelii
ENSGAGG00000008287	CPSF2	100	96.169	ENSPCAG00000012477	CPSF2	100	96.169	Procavia_capensis
ENSGAGG00000008287	CPSF2	100	96.424	ENSPCOG00000026387	CPSF2	100	96.424	Propithecus_coquereli
ENSGAGG00000008287	CPSF2	65	97.959	ENSPVAG00000004223	CPSF2	65	97.959	Pteropus_vampyrus
ENSGAGG00000008287	CPSF2	100	85.190	ENSPNYG00000023356	cpsf2	100	85.190	Pundamilia_nyererei
ENSGAGG00000008287	CPSF2	100	86.785	ENSPNAG00000001849	cpsf2	100	86.785	Pygocentrus_nattereri
ENSGAGG00000008287	CPSF2	100	95.913	ENSRNOG00000005733	Cpsf2	100	95.913	Rattus_norvegicus
ENSGAGG00000008287	CPSF2	100	96.552	ENSRBIG00000044792	CPSF2	100	96.552	Rhinopithecus_bieti
ENSGAGG00000008287	CPSF2	100	96.552	ENSRROG00000034875	CPSF2	100	96.552	Rhinopithecus_roxellana
ENSGAGG00000008287	CPSF2	100	96.424	ENSSBOG00000024571	CPSF2	100	96.424	Saimiri_boliviensis_boliviensis
ENSGAGG00000008287	CPSF2	100	97.190	ENSSHAG00000010458	CPSF2	100	97.190	Sarcophilus_harrisii
ENSGAGG00000008287	CPSF2	100	87.421	ENSSFOG00015002117	cpsf2	100	87.421	Scleropages_formosus
ENSGAGG00000008287	CPSF2	100	84.791	ENSSMAG00000002001	cpsf2	100	85.298	Scophthalmus_maximus
ENSGAGG00000008287	CPSF2	100	85.932	ENSSDUG00000004084	cpsf2	100	85.932	Seriola_dumerili
ENSGAGG00000008287	CPSF2	100	85.425	ENSSLDG00000024330	cpsf2	100	85.425	Seriola_lalandi_dorsalis
ENSGAGG00000008287	CPSF2	60	100.000	ENSSARG00000009784	-	63	100.000	Sorex_araneus
ENSGAGG00000008287	CPSF2	100	97.701	ENSSPUG00000013485	CPSF2	100	97.701	Sphenodon_punctatus
ENSGAGG00000008287	CPSF2	100	84.918	ENSSPAG00000013284	cpsf2	100	84.918	Stegastes_partitus
ENSGAGG00000008287	CPSF2	100	96.552	ENSSSCG00000002447	CPSF2	100	96.552	Sus_scrofa
ENSGAGG00000008287	CPSF2	100	97.829	ENSTGUG00000012571	-	100	97.829	Taeniopygia_guttata
ENSGAGG00000008287	CPSF2	100	84.450	ENSTRUG00000003742	cpsf2	100	84.664	Takifugu_rubripes
ENSGAGG00000008287	CPSF2	100	83.565	ENSTNIG00000012228	cpsf2	100	84.324	Tetraodon_nigroviridis
ENSGAGG00000008287	CPSF2	91	100.000	ENSTBEG00000004530	CPSF2	94	100.000	Tupaia_belangeri
ENSGAGG00000008287	CPSF2	88	97.917	ENSTTRG00000008697	CPSF2	88	97.917	Tursiops_truncatus
ENSGAGG00000008287	CPSF2	100	96.679	ENSUAMG00000028071	CPSF2	100	96.679	Ursus_americanus
ENSGAGG00000008287	CPSF2	100	96.679	ENSUMAG00000005029	CPSF2	100	97.826	Ursus_maritimus
ENSGAGG00000008287	CPSF2	99	96.547	ENSVPAG00000003503	CPSF2	100	96.547	Vicugna_pacos
ENSGAGG00000008287	CPSF2	100	96.552	ENSVVUG00000024642	CPSF2	100	96.552	Vulpes_vulpes
ENSGAGG00000008287	CPSF2	100	92.082	ENSXETG00000010289	cpsf2	100	92.082	Xenopus_tropicalis
ENSGAGG00000008287	CPSF2	100	85.425	ENSXCOG00000001764	cpsf2	100	85.425	Xiphophorus_couchianus
ENSGAGG00000008287	CPSF2	100	85.551	ENSXMAG00000017048	cpsf2	100	85.551	Xiphophorus_maculatus