EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000008348 (Gene tree)
Gene ID: -
Gene Symbol: SBNO2
Alias: FLJ00173|KIAA0963|Sno|Stno
Full Name: strawberry notch homolog 2
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 88662 bases
Position: chrPPEB01002495.1:44617-133278
Accession: 29158
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000010703	ResIII	PF04851.15	1.2e-06	1	1
ENSGAGP00000010701	ResIII	PF04851.15	1.3e-06	1	1
ENSGAGP00000010698	ResIII	PF04851.15	1.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000012271	SBNO2-202	5389	-	ENSGAGP00000010701	1412 (aa)	-	-
ENSGAGT00000012268	SBNO2-201	5473	-	ENSGAGP00000010698	1440 (aa)	-	-
ENSGAGT00000012273	SBNO2-203	5259	-	ENSGAGP00000010703	1344 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000008348's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000008348's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000008348	SBNO2	69	65.986	ENSGAGG00000001065	SBNO1	82	55.483

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000008348	SBNO2	86	77.491	ENSG00000064932	SBNO2	98	70.977	Homo_sapiens
ENSGAGG00000008348	SBNO2	89	71.053	ENSAPOG00000003185	si:ch73-63e15.2	90	70.678	Acanthochromis_polyacanthus
ENSGAGG00000008348	SBNO2	90	70.688	ENSAOCG00000016581	si:ch73-63e15.2	93	73.994	Amphiprion_ocellaris
ENSGAGG00000008348	SBNO2	90	70.769	ENSAPEG00000008862	si:ch73-63e15.2	89	66.447	Amphiprion_percula
ENSGAGG00000008348	SBNO2	87	73.430	ENSATEG00000023838	si:ch73-63e15.2	93	76.677	Anabas_testudineus
ENSGAGG00000008348	SBNO2	91	87.632	ENSAPLG00000007158	SBNO2	99	83.997	Anas_platyrhynchos
ENSGAGG00000008348	SBNO2	99	69.367	ENSANAG00000026685	SBNO2	98	70.250	Aotus_nancymaae
ENSGAGG00000008348	SBNO2	89	69.625	ENSACLG00000005090	si:ch73-63e15.2	88	62.596	Astatotilapia_calliptera
ENSGAGG00000008348	SBNO2	89	69.091	ENSAMXG00000018868	sbno2a	95	73.156	Astyanax_mexicanus
ENSGAGG00000008348	SBNO2	87	71.758	ENSAMXG00000015881	si:ch73-63e15.2	99	63.974	Astyanax_mexicanus
ENSGAGG00000008348	SBNO2	99	70.861	ENSBTAG00000020780	SBNO2	99	70.935	Bos_taurus
ENSGAGG00000008348	SBNO2	86	77.835	ENSCAFG00000019543	SBNO2	99	68.966	Canis_familiaris
ENSGAGG00000008348	SBNO2	86	77.835	ENSCAFG00020017115	SBNO2	98	73.491	Canis_lupus_dingo
ENSGAGG00000008348	SBNO2	99	71.004	ENSCHIG00000026127	SBNO2	99	68.892	Capra_hircus
ENSGAGG00000008348	SBNO2	84	75.661	ENSCAPG00000005731	SBNO2	99	72.557	Cavia_aperea
ENSGAGG00000008348	SBNO2	93	72.629	ENSCPOG00000007477	SBNO2	99	66.410	Cavia_porcellus
ENSGAGG00000008348	SBNO2	87	76.516	ENSCCAG00000037518	SBNO2	98	70.103	Cebus_capucinus
ENSGAGG00000008348	SBNO2	87	77.331	ENSCATG00000037046	SBNO2	98	70.935	Cercocebus_atys
ENSGAGG00000008348	SBNO2	86	76.983	ENSCLAG00000010178	SBNO2	99	76.983	Chinchilla_lanigera
ENSGAGG00000008348	SBNO2	86	77.261	ENSCSAG00000012317	SBNO2	99	68.621	Chlorocebus_sabaeus
ENSGAGG00000008348	SBNO2	99	86.777	ENSCPBG00000008920	SBNO2	91	96.623	Chrysemys_picta_bellii
ENSGAGG00000008348	SBNO2	82	77.987	ENSCANG00000036745	SBNO2	96	77.917	Colobus_angolensis_palliatus
ENSGAGG00000008348	SBNO2	89	71.774	ENSCGRG00001023960	Sbno2	99	64.807	Cricetulus_griseus_chok1gshd
ENSGAGG00000008348	SBNO2	89	73.295	ENSCGRG00000011984	Sbno2	99	66.070	Cricetulus_griseus_crigri
ENSGAGG00000008348	SBNO2	89	68.905	ENSCSEG00000006856	si:ch73-63e15.2	98	70.416	Cynoglossus_semilaevis
ENSGAGG00000008348	SBNO2	95	67.174	ENSCVAG00000005663	si:ch73-63e15.2	86	67.174	Cyprinodon_variegatus
ENSGAGG00000008348	SBNO2	91	67.664	ENSDARG00000098801	sbno2a	94	64.943	Danio_rerio
ENSGAGG00000008348	SBNO2	88	68.509	ENSDARG00000016188	SBNO2	99	62.199	Danio_rerio
ENSGAGG00000008348	SBNO2	99	70.230	ENSDORG00000002916	Sbno2	99	69.028	Dipodomys_ordii
ENSGAGG00000008348	SBNO2	86	78.430	ENSEASG00005021621	SBNO2	99	71.018	Equus_asinus_asinus
ENSGAGG00000008348	SBNO2	86	78.430	ENSECAG00000011827	SBNO2	99	71.091	Equus_caballus
ENSGAGG00000008348	SBNO2	90	72.436	ENSELUG00000020457	si:ch73-63e15.2	87	69.535	Esox_lucius
ENSGAGG00000008348	SBNO2	94	81.791	ENSFALG00000013988	SBNO2	99	81.277	Ficedula_albicollis
ENSGAGG00000008348	SBNO2	84	75.465	ENSFDAG00000015186	SBNO2	91	71.697	Fukomys_damarensis
ENSGAGG00000008348	SBNO2	90	70.115	ENSFHEG00000022262	si:ch73-63e15.2	85	66.566	Fundulus_heteroclitus
ENSGAGG00000008348	SBNO2	90	69.844	ENSGMOG00000007542	si:ch73-63e15.2	98	69.926	Gadus_morhua
ENSGAGG00000008348	SBNO2	99	84.873	ENSGALG00000037522	SBNO2	99	83.519	Gallus_gallus
ENSGAGG00000008348	SBNO2	87	72.373	ENSGAFG00000004860	si:ch73-63e15.2	91	72.458	Gambusia_affinis
ENSGAGG00000008348	SBNO2	86	73.603	ENSGACG00000013190	si:ch73-63e15.2	95	73.689	Gasterosteus_aculeatus
ENSGAGG00000008348	SBNO2	89	69.576	ENSHBUG00000010742	si:ch73-63e15.2	88	64.762	Haplochromis_burtoni
ENSGAGG00000008348	SBNO2	99	70.186	ENSHGLG00000008739	SBNO2	99	68.239	Heterocephalus_glaber_female
ENSGAGG00000008348	SBNO2	86	77.414	ENSHGLG00100005269	SBNO2	99	77.414	Heterocephalus_glaber_male
ENSGAGG00000008348	SBNO2	86	71.330	ENSHCOG00000000884	si:ch73-63e15.2	88	72.633	Hippocampus_comes
ENSGAGG00000008348	SBNO2	86	71.256	ENSIPUG00000019672	sbno2	93	73.745	Ictalurus_punctatus
ENSGAGG00000008348	SBNO2	89	69.288	ENSIPUG00000000537	si:ch73-63e15.2	98	63.887	Ictalurus_punctatus
ENSGAGG00000008348	SBNO2	99	70.802	ENSSTOG00000025832	SBNO2	99	69.209	Ictidomys_tridecemlineatus
ENSGAGG00000008348	SBNO2	90	71.216	ENSJJAG00000017397	Sbno2	99	65.205	Jaculus_jaculus
ENSGAGG00000008348	SBNO2	95	67.145	ENSKMAG00000005541	si:ch73-63e15.2	87	67.043	Kryptolebias_marmoratus
ENSGAGG00000008348	SBNO2	93	69.376	ENSLBEG00000025016	si:ch73-63e15.2	95	75.290	Labrus_bergylta
ENSGAGG00000008348	SBNO2	50	74.556	ENSLACG00000012598	SBNO2	100	77.977	Latimeria_chalumnae
ENSGAGG00000008348	SBNO2	90	73.459	ENSLOCG00000004643	si:ch73-63e15.2	99	67.686	Lepisosteus_oculatus
ENSGAGG00000008348	SBNO2	88	71.248	ENSLAFG00000008824	SBNO2	99	67.649	Loxodonta_africana
ENSGAGG00000008348	SBNO2	90	73.909	ENSMFAG00000040030	SBNO2	98	70.186	Macaca_fascicularis
ENSGAGG00000008348	SBNO2	99	70.000	ENSMMUG00000010886	SBNO2	99	68.690	Macaca_mulatta
ENSGAGG00000008348	SBNO2	87	77.246	ENSMNEG00000039927	SBNO2	98	70.778	Macaca_nemestrina
ENSGAGG00000008348	SBNO2	79	78.236	ENSMLEG00000038556	SBNO2	97	74.936	Mandrillus_leucophaeus
ENSGAGG00000008348	SBNO2	87	71.814	ENSMAMG00000018758	si:ch73-63e15.2	76	71.899	Mastacembelus_armatus
ENSGAGG00000008348	SBNO2	99	64.728	ENSMZEG00005010682	si:ch73-63e15.2	82	66.140	Maylandia_zebra
ENSGAGG00000008348	SBNO2	99	81.009	ENSMGAG00000003801	SBNO2	98	81.009	Meleagris_gallopavo
ENSGAGG00000008348	SBNO2	86	75.217	ENSMAUG00000008034	Sbno2	99	66.229	Mesocricetus_auratus
ENSGAGG00000008348	SBNO2	99	70.627	ENSMICG00000013071	SBNO2	98	70.849	Microcebus_murinus
ENSGAGG00000008348	SBNO2	86	75.302	ENSMOCG00000010504	Sbno2	99	65.975	Microtus_ochrogaster
ENSGAGG00000008348	SBNO2	99	76.123	ENSMODG00000005382	SBNO2	99	74.462	Monodelphis_domestica
ENSGAGG00000008348	SBNO2	71	68.808	ENSMALG00000021831	si:ch73-63e15.2	96	70.406	Monopterus_albus
ENSGAGG00000008348	SBNO2	99	68.351	ENSMUSG00000035673	Sbno2	99	72.200	Mus_musculus
ENSGAGG00000008348	SBNO2	99	67.955	MGP_PahariEiJ_G0030976	Sbno2	99	66.113	Mus_pahari
ENSGAGG00000008348	SBNO2	99	68.178	MGP_SPRETEiJ_G0016381	Sbno2	97	72.200	Mus_spretus
ENSGAGG00000008348	SBNO2	74	79.758	ENSMPUG00000008747	SBNO2	99	76.768	Mustela_putorius_furo
ENSGAGG00000008348	SBNO2	89	74.417	ENSNGAG00000004308	Sbno2	98	66.953	Nannospalax_galili
ENSGAGG00000008348	SBNO2	82	71.928	ENSNBRG00000022968	si:ch73-63e15.2	98	73.119	Neolamprologus_brichardi
ENSGAGG00000008348	SBNO2	88	68.864	ENSNLEG00000001305	SBNO2	98	69.565	Nomascus_leucogenys
ENSGAGG00000008348	SBNO2	75	75.789	ENSMEUG00000013511	-	82	75.789	Notamacropus_eugenii
ENSGAGG00000008348	SBNO2	97	68.659	ENSOPRG00000017238	SBNO2	100	69.425	Ochotona_princeps
ENSGAGG00000008348	SBNO2	90	72.076	ENSODEG00000011822	SBNO2	99	66.879	Octodon_degus
ENSGAGG00000008348	SBNO2	91	69.268	ENSONIG00000002490	si:ch73-63e15.2	97	69.348	Oreochromis_niloticus
ENSGAGG00000008348	SBNO2	97	66.392	ENSORLG00000000913	si:ch73-63e15.2	88	66.542	Oryzias_latipes
ENSGAGG00000008348	SBNO2	97	66.343	ENSORLG00020010978	si:ch73-63e15.2	88	66.542	Oryzias_latipes_hni
ENSGAGG00000008348	SBNO2	97	66.417	ENSORLG00015000202	si:ch73-63e15.2	88	66.617	Oryzias_latipes_hsok
ENSGAGG00000008348	SBNO2	88	70.768	ENSOMEG00000000359	si:ch73-63e15.2	80	68.376	Oryzias_melastigma
ENSGAGG00000008348	SBNO2	87	73.582	ENSOARG00000011130	SBNO2	98	69.196	Ovis_aries
ENSGAGG00000008348	SBNO2	90	74.186	ENSPPAG00000032482	SBNO2	98	74.155	Pan_paniscus
ENSGAGG00000008348	SBNO2	92	73.476	ENSPTRG00000010185	SBNO2	99	70.503	Pan_troglodytes
ENSGAGG00000008348	SBNO2	87	73.738	ENSPANG00000009658	SBNO2	98	67.844	Papio_anubis
ENSGAGG00000008348	SBNO2	76	72.674	ENSPKIG00000009707	-	86	70.628	Paramormyrops_kingsleyae
ENSGAGG00000008348	SBNO2	86	71.969	ENSPKIG00000024201	si:ch73-63e15.2	83	72.479	Paramormyrops_kingsleyae
ENSGAGG00000008348	SBNO2	73	92.175	ENSPSIG00000002852	SBNO2	100	92.276	Pelodiscus_sinensis
ENSGAGG00000008348	SBNO2	86	70.537	ENSPMGG00000014375	si:ch73-63e15.2	90	70.077	Periophthalmus_magnuspinnatus
ENSGAGG00000008348	SBNO2	85	73.913	ENSPEMG00000024122	Sbno2	98	65.982	Peromyscus_maniculatus_bairdii
ENSGAGG00000008348	SBNO2	99	76.589	ENSPCIG00000011264	SBNO2	99	75.830	Phascolarctos_cinereus
ENSGAGG00000008348	SBNO2	85	72.782	ENSPFOG00000004096	si:ch73-63e15.2	99	73.040	Poecilia_formosa
ENSGAGG00000008348	SBNO2	87	72.373	ENSPLAG00000014653	si:ch73-63e15.2	77	72.458	Poecilia_latipinna
ENSGAGG00000008348	SBNO2	87	72.203	ENSPMEG00000002129	si:ch73-63e15.2	90	75.026	Poecilia_mexicana
ENSGAGG00000008348	SBNO2	85	73.127	ENSPREG00000006755	si:ch73-63e15.2	78	69.575	Poecilia_reticulata
ENSGAGG00000008348	SBNO2	95	67.907	ENSPCAG00000012256	SBNO2	99	63.707	Procavia_capensis
ENSGAGG00000008348	SBNO2	90	68.451	ENSPCOG00000015216	SBNO2	98	64.702	Propithecus_coquereli
ENSGAGG00000008348	SBNO2	89	69.764	ENSPNYG00000019926	si:ch73-63e15.2	88	64.689	Pundamilia_nyererei
ENSGAGG00000008348	SBNO2	89	69.250	ENSPNAG00000026609	sbno2a	90	69.612	Pygocentrus_nattereri
ENSGAGG00000008348	SBNO2	87	71.562	ENSPNAG00000020260	si:ch73-63e15.2	84	72.265	Pygocentrus_nattereri
ENSGAGG00000008348	SBNO2	86	75.799	ENSRNOG00000013987	Sbno2	98	69.656	Rattus_norvegicus
ENSGAGG00000008348	SBNO2	80	75.676	ENSRBIG00000009740	SBNO2	87	75.582	Rhinopithecus_bieti
ENSGAGG00000008348	SBNO2	90	80.166	ENSRROG00000044671	SBNO2	97	80.404	Rhinopithecus_roxellana
ENSGAGG00000008348	SBNO2	87	76.133	ENSSBOG00000023562	SBNO2	98	69.882	Saimiri_boliviensis_boliviensis
ENSGAGG00000008348	SBNO2	85	81.667	ENSSHAG00000010241	SBNO2	97	81.802	Sarcophilus_harrisii
ENSGAGG00000008348	SBNO2	87	70.583	ENSSFOG00015005861	si:ch73-63e15.2	97	69.747	Scleropages_formosus
ENSGAGG00000008348	SBNO2	87	72.152	ENSSMAG00000012489	si:ch73-63e15.2	75	72.236	Scophthalmus_maximus
ENSGAGG00000008348	SBNO2	91	68.868	ENSSDUG00000003527	si:ch73-63e15.2	84	67.344	Seriola_dumerili
ENSGAGG00000008348	SBNO2	95	65.702	ENSSLDG00000004623	si:ch73-63e15.2	86	65.588	Seriola_lalandi_dorsalis
ENSGAGG00000008348	SBNO2	93	69.405	ENSSPAG00000017717	si:ch73-63e15.2	82	69.405	Stegastes_partitus
ENSGAGG00000008348	SBNO2	90	75.802	ENSSSCG00000030042	SBNO2	97	71.785	Sus_scrofa
ENSGAGG00000008348	SBNO2	88	70.084	ENSTRUG00000018193	si:ch73-63e15.2	89	70.688	Takifugu_rubripes
ENSGAGG00000008348	SBNO2	79	78.828	ENSUAMG00000006568	SBNO2	92	87.727	Ursus_americanus
ENSGAGG00000008348	SBNO2	89	76.103	ENSVVUG00000022823	SBNO2	99	69.178	Vulpes_vulpes
ENSGAGG00000008348	SBNO2	76	81.621	ENSXETG00000021579	sbno2	90	81.621	Xenopus_tropicalis
ENSGAGG00000008348	SBNO2	72	73.402	ENSXCOG00000009209	si:ch73-63e15.2	91	74.544	Xiphophorus_couchianus
ENSGAGG00000008348	SBNO2	89	70.310	ENSXMAG00000012091	si:ch73-63e15.2	85	73.175	Xiphophorus_maculatus