EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000008350 (Gene tree)
Gene ID: -
Gene Symbol: PRPF8
Alias: PRPC8|Prp8|RP13|SNRNP220|hPrp8
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 31254 bases
Position: chrPPEB01000644.1:101241-132494
Accession: 17340
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000010700	RRM_4	PF10598.9	3.9e-48	1	1
ENSGAGP00000010700	U5_2-snRNA_bdg	PF10597.9	7.6e-74	1	1
ENSGAGP00000010700	PRO8NT	PF08082.11	1.6e-86	1	1
ENSGAGP00000010700	U6-snRNA_bdg	PF10596.9	1.9e-89	1	1
ENSGAGP00000010700	PROCN	PF08083.11	9.5e-237	1	1
ENSGAGP00000010700	PRP8_domainIV	PF12134.8	4.3e-130	1	1
ENSGAGP00000010700	PROCT	PF08084.11	8.1e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000012270	PRPF8-201	7638	-	ENSGAGP00000010700	2335 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000008350's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000008350's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000008350	PRPF8	100	99.529	ENSG00000174231	PRPF8	100	99.529	Homo_sapiens
ENSGAGG00000008350	PRPF8	100	97.819	ENSAPOG00000010079	prpf8	100	97.819	Acanthochromis_polyacanthus
ENSGAGG00000008350	PRPF8	100	99.529	ENSAMEG00000007940	PRPF8	100	99.529	Ailuropoda_melanoleuca
ENSGAGG00000008350	PRPF8	100	95.968	ENSACIG00000018280	prpf8	100	95.968	Amphilophus_citrinellus
ENSGAGG00000008350	PRPF8	100	97.819	ENSAOCG00000010725	prpf8	100	97.819	Amphiprion_ocellaris
ENSGAGG00000008350	PRPF8	100	97.819	ENSAPEG00000014397	prpf8	100	97.819	Amphiprion_percula
ENSGAGG00000008350	PRPF8	100	97.220	ENSATEG00000010062	prpf8	100	97.220	Anabas_testudineus
ENSGAGG00000008350	PRPF8	96	99.778	ENSAPLG00000010357	PRPF8	100	99.778	Anas_platyrhynchos
ENSGAGG00000008350	PRPF8	83	97.580	ENSACAG00000014784	PRPF8	99	97.580	Anolis_carolinensis
ENSGAGG00000008350	PRPF8	100	99.529	ENSANAG00000032629	PRPF8	100	99.529	Aotus_nancymaae
ENSGAGG00000008350	PRPF8	100	97.489	ENSACLG00000020858	prpf8	100	97.489	Astatotilapia_calliptera
ENSGAGG00000008350	PRPF8	100	97.901	ENSAMXG00000020291	prpf8	100	97.901	Astyanax_mexicanus
ENSGAGG00000008350	PRPF8	100	99.529	ENSBTAG00000011488	PRPF8	100	99.529	Bos_taurus
ENSGAGG00000008350	PRPF8	99	86.681	WBGene00004187	prp-8	99	86.767	Caenorhabditis_elegans
ENSGAGG00000008350	PRPF8	100	99.529	ENSCJAG00000001911	PRPF8	100	99.529	Callithrix_jacchus
ENSGAGG00000008350	PRPF8	100	99.529	ENSCAFG00000019221	PRPF8	100	99.529	Canis_familiaris
ENSGAGG00000008350	PRPF8	96	99.688	ENSCAFG00020009943	PRPF8	100	99.688	Canis_lupus_dingo
ENSGAGG00000008350	PRPF8	100	99.529	ENSCHIG00000017499	PRPF8	100	99.529	Capra_hircus
ENSGAGG00000008350	PRPF8	100	99.529	ENSTSYG00000014120	PRPF8	100	99.529	Carlito_syrichta
ENSGAGG00000008350	PRPF8	96	97.461	ENSCAPG00000009459	PRPF8	99	97.461	Cavia_aperea
ENSGAGG00000008350	PRPF8	100	99.529	ENSCPOG00000010379	PRPF8	100	99.529	Cavia_porcellus
ENSGAGG00000008350	PRPF8	100	99.529	ENSCCAG00000031983	-	100	99.529	Cebus_capucinus
ENSGAGG00000008350	PRPF8	100	99.529	ENSCATG00000038595	PRPF8	100	99.529	Cercocebus_atys
ENSGAGG00000008350	PRPF8	100	99.529	ENSCLAG00000004388	PRPF8	100	99.529	Chinchilla_lanigera
ENSGAGG00000008350	PRPF8	100	99.529	ENSCSAG00000013929	PRPF8	100	99.529	Chlorocebus_sabaeus
ENSGAGG00000008350	PRPF8	81	98.163	ENSCHOG00000008590	PRPF8	88	98.163	Choloepus_hoffmanni
ENSGAGG00000008350	PRPF8	100	99.914	ENSCPBG00000020409	PRPF8	100	99.914	Chrysemys_picta_bellii
ENSGAGG00000008350	PRPF8	99	92.993	ENSCSAVG00000007825	-	100	91.323	Ciona_savignyi
ENSGAGG00000008350	PRPF8	100	99.529	ENSCANG00000043088	PRPF8	100	99.529	Colobus_angolensis_palliatus
ENSGAGG00000008350	PRPF8	74	99.409	ENSCGRG00000005129	Prpf8	100	99.409	Cricetulus_griseus_crigri
ENSGAGG00000008350	PRPF8	100	97.734	ENSCSEG00000007905	prpf8	100	97.734	Cynoglossus_semilaevis
ENSGAGG00000008350	PRPF8	100	97.694	ENSDARG00000026180	prpf8	100	97.694	Danio_rerio
ENSGAGG00000008350	PRPF8	93	99.540	ENSDNOG00000018471	PRPF8	99	99.540	Dasypus_novemcinctus
ENSGAGG00000008350	PRPF8	84	98.793	ENSDORG00000006185	Prpf8	96	98.793	Dipodomys_ordii
ENSGAGG00000008350	PRPF8	99	91.581	FBgn0033688	Prp8	97	91.581	Drosophila_melanogaster
ENSGAGG00000008350	PRPF8	100	94.090	ENSETEG00000017592	PRPF8	100	94.090	Echinops_telfairi
ENSGAGG00000008350	PRPF8	99	93.723	ENSEBUG00000006548	prpf8	99	93.723	Eptatretus_burgeri
ENSGAGG00000008350	PRPF8	100	99.529	ENSEASG00005009514	PRPF8	100	99.529	Equus_asinus_asinus
ENSGAGG00000008350	PRPF8	97	99.692	ENSECAG00000021318	PRPF8	100	99.692	Equus_caballus
ENSGAGG00000008350	PRPF8	67	99.259	ENSEEUG00000012120	-	67	99.259	Erinaceus_europaeus
ENSGAGG00000008350	PRPF8	98	96.547	ENSELUG00000007120	prpf8	99	96.547	Esox_lucius
ENSGAGG00000008350	PRPF8	100	99.529	ENSFCAG00000006297	PRPF8	100	99.529	Felis_catus
ENSGAGG00000008350	PRPF8	100	99.743	ENSFALG00000006628	PRPF8	100	99.743	Ficedula_albicollis
ENSGAGG00000008350	PRPF8	100	99.529	ENSFDAG00000004711	PRPF8	100	99.529	Fukomys_damarensis
ENSGAGG00000008350	PRPF8	100	97.481	ENSFHEG00000021084	prpf8	100	97.481	Fundulus_heteroclitus
ENSGAGG00000008350	PRPF8	100	95.474	ENSGMOG00000002028	prpf8	99	95.474	Gadus_morhua
ENSGAGG00000008350	PRPF8	100	99.700	ENSGALG00000002943	PRPF8	100	99.700	Gallus_gallus
ENSGAGG00000008350	PRPF8	99	97.728	ENSGAFG00000010337	prpf8	99	97.728	Gambusia_affinis
ENSGAGG00000008350	PRPF8	100	97.687	ENSGACG00000008504	prpf8	100	97.687	Gasterosteus_aculeatus
ENSGAGG00000008350	PRPF8	100	99.529	ENSGGOG00000005516	PRPF8	100	99.529	Gorilla_gorilla
ENSGAGG00000008350	PRPF8	100	97.730	ENSHBUG00000016192	prpf8	100	97.730	Haplochromis_burtoni
ENSGAGG00000008350	PRPF8	100	99.529	ENSHGLG00000012029	PRPF8	100	99.529	Heterocephalus_glaber_female
ENSGAGG00000008350	PRPF8	100	99.529	ENSHGLG00100016494	PRPF8	100	99.529	Heterocephalus_glaber_male
ENSGAGG00000008350	PRPF8	100	97.649	ENSHCOG00000016414	prpf8	100	97.649	Hippocampus_comes
ENSGAGG00000008350	PRPF8	100	97.690	ENSIPUG00000023230	prpf8	100	97.690	Ictalurus_punctatus
ENSGAGG00000008350	PRPF8	100	99.529	ENSSTOG00000005128	PRPF8	100	99.529	Ictidomys_tridecemlineatus
ENSGAGG00000008350	PRPF8	100	97.345	ENSJJAG00000021159	Prpf8	100	97.345	Jaculus_jaculus
ENSGAGG00000008350	PRPF8	99	98.022	ENSKMAG00000016118	prpf8	99	98.022	Kryptolebias_marmoratus
ENSGAGG00000008350	PRPF8	100	97.562	ENSLBEG00000026903	prpf8	100	97.562	Labrus_bergylta
ENSGAGG00000008350	PRPF8	95	96.072	ENSLACG00000010479	PRPF8	99	98.599	Latimeria_chalumnae
ENSGAGG00000008350	PRPF8	99	97.902	ENSLOCG00000005409	prpf8	99	97.902	Lepisosteus_oculatus
ENSGAGG00000008350	PRPF8	100	99.529	ENSLAFG00000015445	PRPF8	100	99.529	Loxodonta_africana
ENSGAGG00000008350	PRPF8	100	99.529	ENSMFAG00000039995	PRPF8	100	99.529	Macaca_fascicularis
ENSGAGG00000008350	PRPF8	100	99.529	ENSMMUG00000004820	PRPF8	100	99.529	Macaca_mulatta
ENSGAGG00000008350	PRPF8	100	99.529	ENSMNEG00000035713	PRPF8	100	99.529	Macaca_nemestrina
ENSGAGG00000008350	PRPF8	100	99.529	ENSMLEG00000037937	PRPF8	100	99.529	Mandrillus_leucophaeus
ENSGAGG00000008350	PRPF8	100	97.819	ENSMAMG00000008919	prpf8	100	97.819	Mastacembelus_armatus
ENSGAGG00000008350	PRPF8	100	97.489	ENSMZEG00005015073	prpf8	100	97.489	Maylandia_zebra
ENSGAGG00000008350	PRPF8	100	99.700	ENSMGAG00000004769	PRPF8	100	99.700	Meleagris_gallopavo
ENSGAGG00000008350	PRPF8	100	99.486	ENSMICG00000010320	PRPF8	100	99.486	Microcebus_murinus
ENSGAGG00000008350	PRPF8	100	99.486	ENSMOCG00000016838	Prpf8	100	99.486	Microtus_ochrogaster
ENSGAGG00000008350	PRPF8	100	97.305	ENSMMOG00000011887	prpf8	100	97.305	Mola_mola
ENSGAGG00000008350	PRPF8	100	99.529	ENSMODG00000010480	PRPF8	100	99.529	Monodelphis_domestica
ENSGAGG00000008350	PRPF8	97	97.621	ENSMALG00000003558	prpf8	100	97.621	Monopterus_albus
ENSGAGG00000008350	PRPF8	100	99.443	MGP_CAROLIEiJ_G0016740	Prpf8	100	99.443	Mus_caroli
ENSGAGG00000008350	PRPF8	100	99.443	ENSMUSG00000020850	Prpf8	100	99.443	Mus_musculus
ENSGAGG00000008350	PRPF8	100	99.400	MGP_PahariEiJ_G0017877	Prpf8	100	99.400	Mus_pahari
ENSGAGG00000008350	PRPF8	100	99.443	MGP_SPRETEiJ_G0017583	Prpf8	100	99.443	Mus_spretus
ENSGAGG00000008350	PRPF8	100	99.529	ENSMPUG00000013227	PRPF8	100	99.529	Mustela_putorius_furo
ENSGAGG00000008350	PRPF8	100	99.316	ENSMLUG00000002666	PRPF8	100	99.316	Myotis_lucifugus
ENSGAGG00000008350	PRPF8	100	97.730	ENSNGAG00000005305	Prpf8	100	97.730	Nannospalax_galili
ENSGAGG00000008350	PRPF8	100	97.532	ENSNBRG00000013127	prpf8	100	97.532	Neolamprologus_brichardi
ENSGAGG00000008350	PRPF8	97	97.445	ENSNLEG00000000897	PRPF8	98	97.445	Nomascus_leucogenys
ENSGAGG00000008350	PRPF8	99	97.870	ENSMEUG00000015999	PRPF8	100	97.870	Notamacropus_eugenii
ENSGAGG00000008350	PRPF8	100	97.987	ENSOPRG00000003102	PRPF8	100	97.987	Ochotona_princeps
ENSGAGG00000008350	PRPF8	100	99.529	ENSODEG00000008468	PRPF8	100	99.529	Octodon_degus
ENSGAGG00000008350	PRPF8	100	97.533	ENSONIG00000008153	prpf8	100	97.533	Oreochromis_niloticus
ENSGAGG00000008350	PRPF8	82	99.813	ENSOANG00000004250	PRPF8	97	99.813	Ornithorhynchus_anatinus
ENSGAGG00000008350	PRPF8	100	99.529	ENSOCUG00000000081	PRPF8	100	99.529	Oryctolagus_cuniculus
ENSGAGG00000008350	PRPF8	100	97.026	ENSORLG00000008036	prpf8	100	97.026	Oryzias_latipes
ENSGAGG00000008350	PRPF8	100	96.985	ENSORLG00020021070	prpf8	100	96.985	Oryzias_latipes_hni
ENSGAGG00000008350	PRPF8	100	97.026	ENSORLG00015002340	prpf8	100	97.026	Oryzias_latipes_hsok
ENSGAGG00000008350	PRPF8	100	95.540	ENSOMEG00000016866	prpf8	100	95.540	Oryzias_melastigma
ENSGAGG00000008350	PRPF8	100	99.401	ENSOARG00000013312	PRPF8	100	99.401	Ovis_aries
ENSGAGG00000008350	PRPF8	100	99.529	ENSPPAG00000042753	PRPF8	100	99.529	Pan_paniscus
ENSGAGG00000008350	PRPF8	100	99.529	ENSPPRG00000008746	PRPF8	100	99.529	Panthera_pardus
ENSGAGG00000008350	PRPF8	100	99.443	ENSPTIG00000019200	PRPF8	100	99.443	Panthera_tigris_altaica
ENSGAGG00000008350	PRPF8	100	99.529	ENSPTRG00000039576	PRPF8	100	99.529	Pan_troglodytes
ENSGAGG00000008350	PRPF8	99	99.696	ENSPANG00000024607	PRPF8	98	99.696	Papio_anubis
ENSGAGG00000008350	PRPF8	100	97.614	ENSPKIG00000011201	prpf8	100	97.614	Paramormyrops_kingsleyae
ENSGAGG00000008350	PRPF8	100	99.872	ENSPSIG00000013393	PRPF8	100	99.872	Pelodiscus_sinensis
ENSGAGG00000008350	PRPF8	100	99.486	ENSPEMG00000021699	Prpf8	100	99.486	Peromyscus_maniculatus_bairdii
ENSGAGG00000008350	PRPF8	96	93.808	ENSPMAG00000005438	prpf8	100	93.853	Petromyzon_marinus
ENSGAGG00000008350	PRPF8	100	99.529	ENSPCIG00000022603	PRPF8	100	99.688	Phascolarctos_cinereus
ENSGAGG00000008350	PRPF8	100	96.989	ENSPFOG00000007005	prpf8	100	96.989	Poecilia_formosa
ENSGAGG00000008350	PRPF8	100	96.403	ENSPLAG00000020777	prpf8	100	96.403	Poecilia_latipinna
ENSGAGG00000008350	PRPF8	100	96.989	ENSPMEG00000004051	prpf8	100	96.989	Poecilia_mexicana
ENSGAGG00000008350	PRPF8	100	97.816	ENSPREG00000021902	prpf8	100	97.816	Poecilia_reticulata
ENSGAGG00000008350	PRPF8	100	99.529	ENSPPYG00000007777	PRPF8	100	99.529	Pongo_abelii
ENSGAGG00000008350	PRPF8	90	99.010	ENSPCAG00000008938	PRPF8	90	99.010	Procavia_capensis
ENSGAGG00000008350	PRPF8	100	99.486	ENSPCOG00000015182	PRPF8	100	99.486	Propithecus_coquereli
ENSGAGG00000008350	PRPF8	93	99.390	ENSPVAG00000002134	PRPF8	93	99.390	Pteropus_vampyrus
ENSGAGG00000008350	PRPF8	100	97.730	ENSPNYG00000016356	prpf8	100	97.730	Pundamilia_nyererei
ENSGAGG00000008350	PRPF8	100	97.776	ENSPNAG00000009247	prpf8	100	97.776	Pygocentrus_nattereri
ENSGAGG00000008350	PRPF8	100	99.443	ENSRNOG00000003495	Prpf8	100	99.443	Rattus_norvegicus
ENSGAGG00000008350	PRPF8	100	99.529	ENSRBIG00000031219	PRPF8	100	99.529	Rhinopithecus_bieti
ENSGAGG00000008350	PRPF8	100	99.529	ENSRROG00000038014	PRPF8	100	99.529	Rhinopithecus_roxellana
ENSGAGG00000008350	PRPF8	99	62.473	YHR165C	PRP8	95	62.516	Saccharomyces_cerevisiae
ENSGAGG00000008350	PRPF8	100	99.529	ENSSBOG00000029717	PRPF8	100	99.529	Saimiri_boliviensis_boliviensis
ENSGAGG00000008350	PRPF8	100	99.486	ENSSHAG00000006167	PRPF8	100	99.486	Sarcophilus_harrisii
ENSGAGG00000008350	PRPF8	100	97.609	ENSSFOG00015013905	prpf8	100	97.609	Scleropages_formosus
ENSGAGG00000008350	PRPF8	100	97.605	ENSSMAG00000017736	prpf8	100	97.605	Scophthalmus_maximus
ENSGAGG00000008350	PRPF8	100	97.819	ENSSDUG00000003029	prpf8	100	97.819	Seriola_dumerili
ENSGAGG00000008350	PRPF8	68	98.874	ENSSLDG00000017096	prpf8	100	98.874	Seriola_lalandi_dorsalis
ENSGAGG00000008350	PRPF8	87	98.336	ENSSARG00000002892	PRPF8	87	98.336	Sorex_araneus
ENSGAGG00000008350	PRPF8	100	99.400	ENSSPUG00000007463	PRPF8	100	99.400	Sphenodon_punctatus
ENSGAGG00000008350	PRPF8	100	97.220	ENSSPAG00000015639	prpf8	100	97.220	Stegastes_partitus
ENSGAGG00000008350	PRPF8	100	99.529	ENSSSCG00000017817	PRPF8	100	99.529	Sus_scrofa
ENSGAGG00000008350	PRPF8	52	99.651	ENSTGUG00000015597	-	95	99.651	Taeniopygia_guttata
ENSGAGG00000008350	PRPF8	100	99.743	ENSTGUG00000005648	-	100	99.743	Taeniopygia_guttata
ENSGAGG00000008350	PRPF8	100	97.690	ENSTRUG00000015906	prpf8	100	97.690	Takifugu_rubripes
ENSGAGG00000008350	PRPF8	95	98.865	ENSTNIG00000003460	prpf8	99	98.865	Tetraodon_nigroviridis
ENSGAGG00000008350	PRPF8	93	99.728	ENSTBEG00000006431	PRPF8	93	99.728	Tupaia_belangeri
ENSGAGG00000008350	PRPF8	100	98.929	ENSTTRG00000006869	PRPF8	100	98.929	Tursiops_truncatus
ENSGAGG00000008350	PRPF8	54	99.206	ENSUAMG00000015644	-	96	99.206	Ursus_americanus
ENSGAGG00000008350	PRPF8	100	99.272	ENSUMAG00000009385	PRPF8	100	99.272	Ursus_maritimus
ENSGAGG00000008350	PRPF8	71	99.310	ENSVPAG00000006063	-	71	99.310	Vicugna_pacos
ENSGAGG00000008350	PRPF8	100	99.529	ENSVVUG00000021695	PRPF8	99	99.529	Vulpes_vulpes
ENSGAGG00000008350	PRPF8	100	98.716	ENSXETG00000022259	prpf8	100	98.716	Xenopus_tropicalis
ENSGAGG00000008350	PRPF8	100	97.481	ENSXCOG00000012775	prpf8	100	97.481	Xiphophorus_couchianus
ENSGAGG00000008350	PRPF8	100	97.523	ENSXMAG00000008505	prpf8	100	97.523	Xiphophorus_maculatus