EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000008424 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 24328 bases
Position: chrPPEB01004751.1:287-24614
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000010835	RRM_5	PF13893.6	3.2e-06	1	1
ENSGAGP00000010835	RRM_1	PF00076.22	1.2e-13	1	1
ENSGAGP00000010835	SAP	PF02037.27	1.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000012412	-	3621	-	ENSGAGP00000010835	915 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000008424's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000008424's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000008424	-	70	73.343	ENSGAGG00000017702	-	97	73.193

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000008424	-	97	63.404	ENSG00000160633	SAFB	78	80.165	Homo_sapiens
ENSGAGG00000008424	-	95	49.498	ENSAPOG00000022508	safb	96	48.039	Acanthochromis_polyacanthus
ENSGAGG00000008424	-	97	46.028	ENSACIG00000006247	safb	97	45.593	Amphilophus_citrinellus
ENSGAGG00000008424	-	98	48.366	ENSAOCG00000006308	safb	99	47.546	Amphiprion_ocellaris
ENSGAGG00000008424	-	95	49.719	ENSAPEG00000023342	safb	95	48.355	Amphiprion_percula
ENSGAGG00000008424	-	98	49.175	ENSATEG00000004998	safb	96	48.794	Anabas_testudineus
ENSGAGG00000008424	-	93	79.744	ENSAPLG00000006355	-	99	79.118	Anas_platyrhynchos
ENSGAGG00000008424	-	93	72.125	ENSAPLG00000005780	-	95	70.964	Anas_platyrhynchos
ENSGAGG00000008424	-	82	58.915	ENSACAG00000016893	-	96	57.143	Anolis_carolinensis
ENSGAGG00000008424	-	90	70.536	ENSANAG00000028821	SAFB	95	63.147	Aotus_nancymaae
ENSGAGG00000008424	-	95	50.170	ENSACLG00000001926	safb	95	49.388	Astatotilapia_calliptera
ENSGAGG00000008424	-	98	50.108	ENSAMXG00000018154	safb	92	49.724	Astyanax_mexicanus
ENSGAGG00000008424	-	97	62.736	ENSBTAG00000007875	SAFB	96	62.069	Bos_taurus
ENSGAGG00000008424	-	97	65.849	ENSCJAG00000017081	SAFB	94	66.792	Callithrix_jacchus
ENSGAGG00000008424	-	97	63.515	ENSCAFG00000018803	SAFB	83	63.147	Canis_familiaris
ENSGAGG00000008424	-	97	63.515	ENSCAFG00020018943	SAFB	95	63.147	Canis_lupus_dingo
ENSGAGG00000008424	-	97	62.625	ENSCHIG00000007262	SAFB	99	59.916	Capra_hircus
ENSGAGG00000008424	-	56	57.060	ENSTSYG00000001851	-	92	56.867	Carlito_syrichta
ENSGAGG00000008424	-	93	68.712	ENSCAPG00000012121	SAFB	94	68.712	Cavia_aperea
ENSGAGG00000008424	-	67	57.298	ENSCPOG00000026322	SAFB	96	59.832	Cavia_porcellus
ENSGAGG00000008424	-	90	70.536	ENSCCAG00000020193	SAFB	95	62.823	Cebus_capucinus
ENSGAGG00000008424	-	97	63.404	ENSCATG00000029994	SAFB	95	63.039	Cercocebus_atys
ENSGAGG00000008424	-	97	62.336	ENSCLAG00000007734	SAFB	96	60.127	Chinchilla_lanigera
ENSGAGG00000008424	-	97	63.515	ENSCSAG00000009949	SAFB	95	63.147	Chlorocebus_sabaeus
ENSGAGG00000008424	-	86	53.875	ENSCHOG00000003208	SAFB	88	54.115	Choloepus_hoffmanni
ENSGAGG00000008424	-	92	77.069	ENSCPBG00000010928	-	95	77.187	Chrysemys_picta_bellii
ENSGAGG00000008424	-	92	97.262	ENSCPBG00000010936	-	95	97.262	Chrysemys_picta_bellii
ENSGAGG00000008424	-	97	59.956	ENSCANG00000019754	-	95	59.243	Colobus_angolensis_palliatus
ENSGAGG00000008424	-	92	68.519	ENSCANG00000004774	-	94	63.830	Colobus_angolensis_palliatus
ENSGAGG00000008424	-	67	56.347	ENSCGRG00001002254	Safb	96	59.263	Cricetulus_griseus_chok1gshd
ENSGAGG00000008424	-	60	51.244	ENSCGRG00000011529	Safb	92	56.413	Cricetulus_griseus_crigri
ENSGAGG00000008424	-	98	45.000	ENSCSEG00000019870	safb	97	45.122	Cynoglossus_semilaevis
ENSGAGG00000008424	-	97	44.519	ENSCVAG00000002226	safb	94	44.321	Cyprinodon_variegatus
ENSGAGG00000008424	-	94	49.490	ENSDARG00000020467	safb	95	48.512	Danio_rerio
ENSGAGG00000008424	-	97	63.111	ENSDNOG00000015746	SAFB	95	62.020	Dasypus_novemcinctus
ENSGAGG00000008424	-	67	58.621	ENSDORG00000016200	Safb	96	57.233	Dipodomys_ordii
ENSGAGG00000008424	-	70	58.696	ENSETEG00000018679	SAFB	74	58.416	Echinops_telfairi
ENSGAGG00000008424	-	97	59.844	ENSEASG00005023019	SAFB	98	57.595	Equus_asinus_asinus
ENSGAGG00000008424	-	67	59.420	ENSECAG00000018659	SAFB	85	61.207	Equus_caballus
ENSGAGG00000008424	-	99	48.825	ENSELUG00000022327	safb	99	48.077	Esox_lucius
ENSGAGG00000008424	-	97	63.029	ENSFCAG00000011835	SAFB	95	62.675	Felis_catus
ENSGAGG00000008424	-	90	83.413	ENSFALG00000013881	-	95	83.194	Ficedula_albicollis
ENSGAGG00000008424	-	100	73.564	ENSFALG00000013882	-	88	72.186	Ficedula_albicollis
ENSGAGG00000008424	-	92	66.667	ENSFDAG00000020306	SAFB	96	66.667	Fukomys_damarensis
ENSGAGG00000008424	-	78	59.167	ENSFHEG00000004219	safb	88	59.167	Fundulus_heteroclitus
ENSGAGG00000008424	-	99	45.601	ENSGMOG00000014280	safb	96	47.351	Gadus_morhua
ENSGAGG00000008424	-	100	73.290	ENSGALG00000013365	-	95	72.096	Gallus_gallus
ENSGAGG00000008424	-	100	83.931	ENSGALG00000001948	-	96	83.931	Gallus_gallus
ENSGAGG00000008424	-	97	46.060	ENSGAFG00000016162	safb	95	45.505	Gambusia_affinis
ENSGAGG00000008424	-	98	49.017	ENSGACG00000011385	safb	97	48.253	Gasterosteus_aculeatus
ENSGAGG00000008424	-	97	63.515	ENSGGOG00000015109	SAFB	95	63.147	Gorilla_gorilla
ENSGAGG00000008424	-	98	45.465	ENSHBUG00000009218	safb	96	44.912	Haplochromis_burtoni
ENSGAGG00000008424	-	67	59.655	ENSHGLG00000015883	SAFB	95	60.934	Heterocephalus_glaber_female
ENSGAGG00000008424	-	84	70.552	ENSHGLG00100004228	SAFB	92	70.552	Heterocephalus_glaber_male
ENSGAGG00000008424	-	92	40.460	ENSHCOG00000001705	safb	95	40.997	Hippocampus_comes
ENSGAGG00000008424	-	61	59.194	ENSIPUG00000024869	safb2	97	50.324	Ictalurus_punctatus
ENSGAGG00000008424	-	63	59.432	ENSSTOG00000002783	SAFB	95	62.030	Ictidomys_tridecemlineatus
ENSGAGG00000008424	-	100	58.122	ENSJJAG00000009021	Safb	96	60.127	Jaculus_jaculus
ENSGAGG00000008424	-	95	49.329	ENSKMAG00000022308	safb	95	48.257	Kryptolebias_marmoratus
ENSGAGG00000008424	-	97	50.109	ENSLBEG00000006015	safb	95	50.055	Labrus_bergylta
ENSGAGG00000008424	-	100	55.227	ENSLACG00000018090	SAFB	94	55.027	Latimeria_chalumnae
ENSGAGG00000008424	-	98	53.384	ENSLOCG00000003613	safb	99	52.601	Lepisosteus_oculatus
ENSGAGG00000008424	-	100	63.118	ENSLAFG00000003840	SAFB	96	62.581	Loxodonta_africana
ENSGAGG00000008424	-	97	63.404	ENSMFAG00000003885	SAFB	95	62.716	Macaca_fascicularis
ENSGAGG00000008424	-	97	63.404	ENSMMUG00000017970	SAFB	95	63.039	Macaca_mulatta
ENSGAGG00000008424	-	97	60.734	ENSMNEG00000035637	SAFB	95	60.150	Macaca_nemestrina
ENSGAGG00000008424	-	97	56.432	ENSMLEG00000038637	SAFB	88	66.667	Mandrillus_leucophaeus
ENSGAGG00000008424	-	99	49.356	ENSMAMG00000003357	safb	88	48.977	Mastacembelus_armatus
ENSGAGG00000008424	-	95	50.282	ENSMZEG00005009120	safb	95	49.499	Maylandia_zebra
ENSGAGG00000008424	-	97	70.819	ENSMGAG00000001101	-	95	68.687	Meleagris_gallopavo
ENSGAGG00000008424	-	93	74.942	ENSMGAG00000001051	-	99	74.130	Meleagris_gallopavo
ENSGAGG00000008424	-	89	55.327	ENSMICG00000046795	-	99	67.708	Microcebus_murinus
ENSGAGG00000008424	-	100	62.121	ENSMICG00000008739	-	95	61.580	Microcebus_murinus
ENSGAGG00000008424	-	67	56.006	ENSMOCG00000014040	Safb	96	59.177	Microtus_ochrogaster
ENSGAGG00000008424	-	100	64.416	ENSMODG00000001236	SAFB	95	65.059	Monodelphis_domestica
ENSGAGG00000008424	-	98	48.754	ENSMALG00000020330	safb	99	47.505	Monopterus_albus
ENSGAGG00000008424	-	67	56.299	MGP_CAROLIEiJ_G0021780	Safb	96	59.263	Mus_caroli
ENSGAGG00000008424	-	67	56.143	ENSMUSG00000071054	Safb	96	59.368	Mus_musculus
ENSGAGG00000008424	-	66	56.025	MGP_PahariEiJ_G0020769	Safb	96	59.263	Mus_pahari
ENSGAGG00000008424	-	100	62.177	ENSMPUG00000006123	SAFB	90	61.961	Mustela_putorius_furo
ENSGAGG00000008424	-	97	64.182	ENSMLUG00000001081	SAFB	95	62.392	Myotis_lucifugus
ENSGAGG00000008424	-	97	57.003	ENSNGAG00000019882	Safb	96	56.947	Nannospalax_galili
ENSGAGG00000008424	-	97	63.252	ENSNLEG00000013551	SAFB	99	62.567	Nomascus_leucogenys
ENSGAGG00000008424	-	63	55.232	ENSOPRG00000011561	-	100	58.701	Ochotona_princeps
ENSGAGG00000008424	-	67	59.937	ENSODEG00000014838	SAFB	96	61.547	Octodon_degus
ENSGAGG00000008424	-	95	50.960	ENSONIG00000002318	safb	95	50.330	Oreochromis_niloticus
ENSGAGG00000008424	-	90	55.529	ENSOCUG00000014628	SAFB	95	53.442	Oryctolagus_cuniculus
ENSGAGG00000008424	-	94	48.292	ENSORLG00000016989	safb	94	47.170	Oryzias_latipes
ENSGAGG00000008424	-	97	44.457	ENSORLG00020000404	safb	93	43.722	Oryzias_latipes_hni
ENSGAGG00000008424	-	97	47.951	ENSORLG00015010733	safb	94	47.111	Oryzias_latipes_hsok
ENSGAGG00000008424	-	94	48.747	ENSOMEG00000009066	safb	95	48.169	Oryzias_melastigma
ENSGAGG00000008424	-	70	60.769	ENSOGAG00000027769	SAFB	95	60.560	Otolemur_garnettii
ENSGAGG00000008424	-	82	58.278	ENSOARG00000007856	-	99	57.124	Ovis_aries
ENSGAGG00000008424	-	97	59.733	ENSOARG00000007662	-	96	56.554	Ovis_aries
ENSGAGG00000008424	-	97	63.515	ENSPPAG00000035129	SAFB	95	62.823	Pan_paniscus
ENSGAGG00000008424	-	97	63.029	ENSPPRG00000017197	SAFB	95	62.675	Panthera_pardus
ENSGAGG00000008424	-	97	63.515	ENSPTRG00000010335	SAFB	95	62.823	Pan_troglodytes
ENSGAGG00000008424	-	97	63.404	ENSPANG00000007770	SAFB	95	62.716	Papio_anubis
ENSGAGG00000008424	-	99	50.749	ENSPKIG00000009902	safb	96	50.422	Paramormyrops_kingsleyae
ENSGAGG00000008424	-	100	76.319	ENSPSIG00000009367	-	96	75.780	Pelodiscus_sinensis
ENSGAGG00000008424	-	100	88.095	ENSPSIG00000011679	-	95	90.382	Pelodiscus_sinensis
ENSGAGG00000008424	-	67	56.338	ENSPEMG00000020428	Safb	96	59.197	Peromyscus_maniculatus_bairdii
ENSGAGG00000008424	-	56	66.796	ENSPCIG00000009504	-	99	68.544	Phascolarctos_cinereus
ENSGAGG00000008424	-	93	46.005	ENSPFOG00000007745	safb	99	46.644	Poecilia_formosa
ENSGAGG00000008424	-	97	44.873	ENSPLAG00000001614	safb	95	45.475	Poecilia_latipinna
ENSGAGG00000008424	-	82	51.926	ENSPMEG00000021023	safb	99	44.699	Poecilia_mexicana
ENSGAGG00000008424	-	65	52.429	ENSPREG00000012496	safb	95	45.847	Poecilia_reticulata
ENSGAGG00000008424	-	97	63.293	ENSPPYG00000009428	SAFB	95	62.931	Pongo_abelii
ENSGAGG00000008424	-	99	59.219	ENSPCAG00000006475	SAFB	95	58.539	Procavia_capensis
ENSGAGG00000008424	-	100	58.811	ENSPCOG00000014090	SAFB	95	58.270	Propithecus_coquereli
ENSGAGG00000008424	-	97	58.509	ENSPVAG00000004913	SAFB	95	57.651	Pteropus_vampyrus
ENSGAGG00000008424	-	99	49.467	ENSPNAG00000021838	safb	96	49.409	Pygocentrus_nattereri
ENSGAGG00000008424	-	67	55.832	ENSRNOG00000050543	Safb	96	58.650	Rattus_norvegicus
ENSGAGG00000008424	-	89	66.957	ENSRBIG00000042509	SAFB	95	61.806	Rhinopithecus_bieti
ENSGAGG00000008424	-	97	63.293	ENSRROG00000029278	SAFB	95	62.608	Rhinopithecus_roxellana
ENSGAGG00000008424	-	90	70.536	ENSSBOG00000026291	SAFB	95	63.147	Saimiri_boliviensis_boliviensis
ENSGAGG00000008424	-	97	52.370	ENSSFOG00015008156	safb	93	52.260	Scleropages_formosus
ENSGAGG00000008424	-	98	47.294	ENSSMAG00000009316	safb	94	48.482	Scophthalmus_maximus
ENSGAGG00000008424	-	98	46.417	ENSSDUG00000009652	safb	95	47.807	Seriola_dumerili
ENSGAGG00000008424	-	98	47.149	ENSSLDG00000001670	safb	95	47.978	Seriola_lalandi_dorsalis
ENSGAGG00000008424	-	63	57.922	ENSSARG00000010475	SAFB	95	59.075	Sorex_araneus
ENSGAGG00000008424	-	58	68.030	ENSSPUG00000009747	-	100	64.413	Sphenodon_punctatus
ENSGAGG00000008424	-	86	81.944	ENSSPUG00000009820	-	98	81.944	Sphenodon_punctatus
ENSGAGG00000008424	-	94	44.470	ENSSPAG00000015682	safb	94	46.412	Stegastes_partitus
ENSGAGG00000008424	-	97	62.361	ENSSSCG00000013522	SAFB	99	62.485	Sus_scrofa
ENSGAGG00000008424	-	99	72.144	ENSTGUG00000000502	-	99	70.729	Taeniopygia_guttata
ENSGAGG00000008424	-	97	80.868	ENSTGUG00000000489	-	99	80.868	Taeniopygia_guttata
ENSGAGG00000008424	-	94	47.704	ENSTRUG00000003567	safb	95	46.456	Takifugu_rubripes
ENSGAGG00000008424	-	93	44.766	ENSTNIG00000015470	safb	100	44.295	Tetraodon_nigroviridis
ENSGAGG00000008424	-	51	63.768	ENSTBEG00000013124	-	66	63.768	Tupaia_belangeri
ENSGAGG00000008424	-	89	86.111	ENSTTRG00000013588	SAFB	88	66.154	Tursiops_truncatus
ENSGAGG00000008424	-	75	61.506	ENSUAMG00000024543	SAFB	87	60.653	Ursus_americanus
ENSGAGG00000008424	-	84	59.774	ENSUMAG00000009734	SAFB	91	58.733	Ursus_maritimus
ENSGAGG00000008424	-	67	80.723	ENSVPAG00000012043	SAFB	70	80.723	Vicugna_pacos
ENSGAGG00000008424	-	97	64.071	ENSVVUG00000013720	SAFB	83	62.500	Vulpes_vulpes
ENSGAGG00000008424	-	70	50.698	ENSXETG00000008755	safb	99	54.644	Xenopus_tropicalis
ENSGAGG00000008424	-	82	52.764	ENSXMAG00000003458	safb	95	45.414	Xiphophorus_maculatus