EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000008438 (Gene tree)
Gene ID: -
Gene Symbol: RNPC3
Alias: FLJ20008|KIAA1839|RBM40|SNRNP65
Full Name: RNA binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 23179 bases
Position: chrPPEB01005522.1:71383-94561
Accession: 18666
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000010853	RRM_1	PF00076.22	1e-17	1	2
ENSGAGP00000010853	RRM_1	PF00076.22	1e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000012432	RNPC3-201	2854	-	ENSGAGP00000010853	519 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000008438's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000008438's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000008438	RNPC3	95	70.221	ENSG00000185946	RNPC3	100	67.143	Homo_sapiens
ENSGAGG00000008438	RNPC3	94	58.130	ENSAPOG00000017371	rnpc3	97	56.911	Acanthochromis_polyacanthus
ENSGAGG00000008438	RNPC3	98	69.591	ENSAMEG00000001694	RNPC3	95	70.884	Ailuropoda_melanoleuca
ENSGAGG00000008438	RNPC3	94	55.578	ENSACIG00000021043	rnpc3	97	55.578	Amphilophus_citrinellus
ENSGAGG00000008438	RNPC3	94	58.116	ENSAOCG00000014052	rnpc3	95	56.914	Amphiprion_ocellaris
ENSGAGG00000008438	RNPC3	94	57.916	ENSAPEG00000008739	rnpc3	95	56.713	Amphiprion_percula
ENSGAGG00000008438	RNPC3	94	56.917	ENSATEG00000021263	rnpc3	97	57.905	Anabas_testudineus
ENSGAGG00000008438	RNPC3	87	82.522	ENSAPLG00000015605	RNPC3	100	82.301	Anas_platyrhynchos
ENSGAGG00000008438	RNPC3	99	76.172	ENSACAG00000002029	RNPC3	96	78.455	Anolis_carolinensis
ENSGAGG00000008438	RNPC3	98	67.773	ENSANAG00000019950	RNPC3	95	69.215	Aotus_nancymaae
ENSGAGG00000008438	RNPC3	94	57.755	ENSACLG00000014702	rnpc3	96	57.755	Astatotilapia_calliptera
ENSGAGG00000008438	RNPC3	95	56.137	ENSAMXG00000033372	rnpc3	97	57.287	Astyanax_mexicanus
ENSGAGG00000008438	RNPC3	95	71.888	ENSBTAG00000019091	RNPC3	95	71.687	Bos_taurus
ENSGAGG00000008438	RNPC3	98	67.578	ENSCJAG00000035686	RNPC3	95	69.014	Callithrix_jacchus
ENSGAGG00000008438	RNPC3	98	69.336	ENSCAFG00000019972	RNPC3	95	70.624	Canis_familiaris
ENSGAGG00000008438	RNPC3	98	69.531	ENSCAFG00020011300	RNPC3	95	70.825	Canis_lupus_dingo
ENSGAGG00000008438	RNPC3	95	71.888	ENSCHIG00000020361	RNPC3	95	71.486	Capra_hircus
ENSGAGG00000008438	RNPC3	98	67.969	ENSTSYG00000030256	RNPC3	95	68.813	Carlito_syrichta
ENSGAGG00000008438	RNPC3	84	62.870	ENSCAPG00000013600	RNPC3	97	59.821	Cavia_aperea
ENSGAGG00000008438	RNPC3	95	70.624	ENSCPOG00000031638	RNPC3	95	70.221	Cavia_porcellus
ENSGAGG00000008438	RNPC3	98	67.773	ENSCCAG00000024301	RNPC3	95	69.215	Cebus_capucinus
ENSGAGG00000008438	RNPC3	95	53.862	ENSCATG00000035930	-	95	54.065	Cercocebus_atys
ENSGAGG00000008438	RNPC3	95	70.161	ENSCATG00000002086	RNPC3	95	70.161	Cercocebus_atys
ENSGAGG00000008438	RNPC3	96	68.701	ENSCLAG00000005169	RNPC3	95	69.416	Chinchilla_lanigera
ENSGAGG00000008438	RNPC3	95	70.161	ENSCSAG00000001519	RNPC3	95	70.161	Chlorocebus_sabaeus
ENSGAGG00000008438	RNPC3	100	96.923	ENSCPBG00000028311	RNPC3	100	96.923	Chrysemys_picta_bellii
ENSGAGG00000008438	RNPC3	92	37.137	ENSCSAVG00000002800	-	100	37.474	Ciona_savignyi
ENSGAGG00000008438	RNPC3	95	69.758	ENSCANG00000031444	RNPC3	95	69.758	Colobus_angolensis_palliatus
ENSGAGG00000008438	RNPC3	96	69.291	ENSCGRG00001019276	Rnpc3	96	70.020	Cricetulus_griseus_chok1gshd
ENSGAGG00000008438	RNPC3	87	69.298	ENSCGRG00000000053	Rnpc3	100	69.079	Cricetulus_griseus_crigri
ENSGAGG00000008438	RNPC3	95	56.883	ENSCSEG00000013475	rnpc3	97	56.883	Cynoglossus_semilaevis
ENSGAGG00000008438	RNPC3	94	55.644	ENSCVAG00000002645	rnpc3	97	55.842	Cyprinodon_variegatus
ENSGAGG00000008438	RNPC3	95	56.972	ENSDARG00000011247	rnpc3	89	65.089	Danio_rerio
ENSGAGG00000008438	RNPC3	95	70.624	ENSDNOG00000044555	-	95	70.423	Dasypus_novemcinctus
ENSGAGG00000008438	RNPC3	95	70.624	ENSDNOG00000047498	-	95	70.423	Dasypus_novemcinctus
ENSGAGG00000008438	RNPC3	100	68.199	ENSDORG00000027343	Rnpc3	96	70.363	Dipodomys_ordii
ENSGAGG00000008438	RNPC3	97	48.748	ENSEBUG00000002068	rnpc3	98	47.287	Eptatretus_burgeri
ENSGAGG00000008438	RNPC3	98	69.667	ENSEASG00005015957	RNPC3	95	70.968	Equus_asinus_asinus
ENSGAGG00000008438	RNPC3	98	69.472	ENSECAG00000021148	RNPC3	95	70.766	Equus_caballus
ENSGAGG00000008438	RNPC3	95	54.352	ENSELUG00000002264	rnpc3	97	55.126	Esox_lucius
ENSGAGG00000008438	RNPC3	95	71.026	ENSFCAG00000024312	RNPC3	95	70.825	Felis_catus
ENSGAGG00000008438	RNPC3	87	81.416	ENSFALG00000002580	RNPC3	100	80.973	Ficedula_albicollis
ENSGAGG00000008438	RNPC3	95	71.429	ENSFDAG00000019948	RNPC3	96	71.026	Fukomys_damarensis
ENSGAGG00000008438	RNPC3	94	52.556	ENSFHEG00000020647	rnpc3	96	52.352	Fundulus_heteroclitus
ENSGAGG00000008438	RNPC3	95	54.910	ENSGMOG00000019213	rnpc3	96	55.131	Gadus_morhua
ENSGAGG00000008438	RNPC3	99	81.589	ENSGALG00000005162	RNPC3	94	80.769	Gallus_gallus
ENSGAGG00000008438	RNPC3	94	56.687	ENSGAFG00000017236	rnpc3	97	56.487	Gambusia_affinis
ENSGAGG00000008438	RNPC3	94	57.287	ENSGACG00000002048	rnpc3	97	56.548	Gasterosteus_aculeatus
ENSGAGG00000008438	RNPC3	94	59.305	ENSGGOG00000026201	-	94	59.509	Gorilla_gorilla
ENSGAGG00000008438	RNPC3	78	69.231	ENSHBUG00000015966	rnpc3	82	69.231	Haplochromis_burtoni
ENSGAGG00000008438	RNPC3	95	70.423	ENSHGLG00000001708	RNPC3	95	70.221	Heterocephalus_glaber_female
ENSGAGG00000008438	RNPC3	95	70.423	ENSHGLG00100003005	RNPC3	95	70.221	Heterocephalus_glaber_male
ENSGAGG00000008438	RNPC3	94	56.566	ENSHCOG00000017135	rnpc3	97	55.556	Hippocampus_comes
ENSGAGG00000008438	RNPC3	94	58.452	ENSIPUG00000002916	rnpc3	96	58.452	Ictalurus_punctatus
ENSGAGG00000008438	RNPC3	95	70.020	ENSSTOG00000025020	RNPC3	95	69.618	Ictidomys_tridecemlineatus
ENSGAGG00000008438	RNPC3	94	68.623	ENSJJAG00000010203	Rnpc3	96	68.813	Jaculus_jaculus
ENSGAGG00000008438	RNPC3	95	56.800	ENSKMAG00000017358	rnpc3	97	57.085	Kryptolebias_marmoratus
ENSGAGG00000008438	RNPC3	94	58.753	ENSLBEG00000024901	rnpc3	95	58.350	Labrus_bergylta
ENSGAGG00000008438	RNPC3	95	65.455	ENSLACG00000005720	RNPC3	91	63.838	Latimeria_chalumnae
ENSGAGG00000008438	RNPC3	95	60.721	ENSLOCG00000007986	rnpc3	97	59.319	Lepisosteus_oculatus
ENSGAGG00000008438	RNPC3	95	70.020	ENSLAFG00000032342	RNPC3	96	69.819	Loxodonta_africana
ENSGAGG00000008438	RNPC3	95	70.363	ENSMFAG00000002004	RNPC3	95	70.363	Macaca_fascicularis
ENSGAGG00000008438	RNPC3	95	52.429	ENSMFAG00000002917	-	95	52.227	Macaca_fascicularis
ENSGAGG00000008438	RNPC3	95	70.161	ENSMMUG00000018039	RNPC3	95	70.161	Macaca_mulatta
ENSGAGG00000008438	RNPC3	77	67.619	ENSMMUG00000002098	-	86	67.143	Macaca_mulatta
ENSGAGG00000008438	RNPC3	76	57.071	ENSMNEG00000029209	-	86	58.853	Macaca_nemestrina
ENSGAGG00000008438	RNPC3	95	66.532	ENSMNEG00000033950	RNPC3	95	66.532	Macaca_nemestrina
ENSGAGG00000008438	RNPC3	95	70.161	ENSMLEG00000033628	RNPC3	95	70.161	Mandrillus_leucophaeus
ENSGAGG00000008438	RNPC3	95	53.012	ENSMLEG00000034644	-	96	54.291	Mandrillus_leucophaeus
ENSGAGG00000008438	RNPC3	94	53.800	ENSMAMG00000007496	rnpc3	97	53.600	Mastacembelus_armatus
ENSGAGG00000008438	RNPC3	98	54.815	ENSMZEG00005020233	rnpc3	97	56.805	Maylandia_zebra
ENSGAGG00000008438	RNPC3	87	82.096	ENSMGAG00000006381	RNPC3	100	82.533	Meleagris_gallopavo
ENSGAGG00000008438	RNPC3	95	70.825	ENSMAUG00000001358	Rnpc3	96	71.630	Mesocricetus_auratus
ENSGAGG00000008438	RNPC3	95	70.624	ENSMICG00000029591	RNPC3	95	70.423	Microcebus_murinus
ENSGAGG00000008438	RNPC3	97	69.291	ENSMOCG00000013423	Rnpc3	95	70.020	Microtus_ochrogaster
ENSGAGG00000008438	RNPC3	94	53.659	ENSMMOG00000005309	rnpc3	96	53.878	Mola_mola
ENSGAGG00000008438	RNPC3	95	73.834	ENSMODG00000002946	RNPC3	96	73.631	Monodelphis_domestica
ENSGAGG00000008438	RNPC3	95	54.902	ENSMALG00000015471	rnpc3	98	53.922	Monopterus_albus
ENSGAGG00000008438	RNPC3	96	68.442	MGP_CAROLIEiJ_G0025555	Rnpc3	97	70.161	Mus_caroli
ENSGAGG00000008438	RNPC3	96	68.639	ENSMUSG00000027981	Rnpc3	99	68.884	Mus_musculus
ENSGAGG00000008438	RNPC3	96	68.442	MGP_PahariEiJ_G0027001	Rnpc3	97	69.153	Mus_pahari
ENSGAGG00000008438	RNPC3	96	69.428	MGP_SPRETEiJ_G0026505	Rnpc3	97	69.153	Mus_spretus
ENSGAGG00000008438	RNPC3	98	69.336	ENSMPUG00000007349	RNPC3	95	70.624	Mustela_putorius_furo
ENSGAGG00000008438	RNPC3	95	69.819	ENSMLUG00000028743	RNPC3	95	69.819	Myotis_lucifugus
ENSGAGG00000008438	RNPC3	96	69.685	ENSNGAG00000010939	Rnpc3	96	70.423	Nannospalax_galili
ENSGAGG00000008438	RNPC3	94	57.551	ENSNBRG00000012196	rnpc3	93	57.551	Neolamprologus_brichardi
ENSGAGG00000008438	RNPC3	95	70.221	ENSNLEG00000012013	RNPC3	95	70.221	Nomascus_leucogenys
ENSGAGG00000008438	RNPC3	95	70.221	ENSODEG00000007612	RNPC3	95	69.618	Octodon_degus
ENSGAGG00000008438	RNPC3	94	59.109	ENSONIG00000004770	rnpc3	99	57.895	Oreochromis_niloticus
ENSGAGG00000008438	RNPC3	90	75.319	ENSOANG00000008220	RNPC3	100	74.468	Ornithorhynchus_anatinus
ENSGAGG00000008438	RNPC3	99	68.260	ENSOCUG00000004016	RNPC3	96	70.020	Oryctolagus_cuniculus
ENSGAGG00000008438	RNPC3	94	56.033	ENSORLG00000005694	rnpc3	97	56.033	Oryzias_latipes
ENSGAGG00000008438	RNPC3	94	56.442	ENSORLG00020005513	rnpc3	97	56.442	Oryzias_latipes_hni
ENSGAGG00000008438	RNPC3	94	56.237	ENSORLG00015002179	rnpc3	97	56.237	Oryzias_latipes_hsok
ENSGAGG00000008438	RNPC3	94	56.735	ENSOMEG00000017737	rnpc3	97	55.714	Oryzias_melastigma
ENSGAGG00000008438	RNPC3	95	70.968	ENSOGAG00000026182	RNPC3	95	70.766	Otolemur_garnettii
ENSGAGG00000008438	RNPC3	95	71.888	ENSOARG00000018719	RNPC3	95	71.486	Ovis_aries
ENSGAGG00000008438	RNPC3	94	60.123	ENSPPAG00000030278	-	95	59.877	Pan_paniscus
ENSGAGG00000008438	RNPC3	95	69.880	ENSPPAG00000037459	RNPC3	95	70.281	Pan_paniscus
ENSGAGG00000008438	RNPC3	95	71.227	ENSPPRG00000020246	RNPC3	95	71.026	Panthera_pardus
ENSGAGG00000008438	RNPC3	95	71.227	ENSPTIG00000009887	RNPC3	97	71.026	Panthera_tigris_altaica
ENSGAGG00000008438	RNPC3	98	68.359	ENSPTRG00000033902	RNPC3	95	70.020	Pan_troglodytes
ENSGAGG00000008438	RNPC3	94	59.053	ENSPTRG00000044227	-	95	59.053	Pan_troglodytes
ENSGAGG00000008438	RNPC3	95	57.085	ENSPANG00000029957	-	97	55.870	Papio_anubis
ENSGAGG00000008438	RNPC3	95	70.161	ENSPANG00000012137	RNPC3	95	70.161	Papio_anubis
ENSGAGG00000008438	RNPC3	95	58.185	ENSPKIG00000008828	rnpc3	98	56.213	Paramormyrops_kingsleyae
ENSGAGG00000008438	RNPC3	63	94.207	ENSPSIG00000007396	RNPC3	100	94.207	Pelodiscus_sinensis
ENSGAGG00000008438	RNPC3	95	51.800	ENSPMGG00000011742	rnpc3	97	51.800	Periophthalmus_magnuspinnatus
ENSGAGG00000008438	RNPC3	88	68.330	ENSPEMG00000020112	Rnpc3	100	68.860	Peromyscus_maniculatus_bairdii
ENSGAGG00000008438	RNPC3	95	47.490	ENSPMAG00000003778	rnpc3	97	47.481	Petromyzon_marinus
ENSGAGG00000008438	RNPC3	95	73.428	ENSPCIG00000004415	-	96	73.225	Phascolarctos_cinereus
ENSGAGG00000008438	RNPC3	94	55.777	ENSPFOG00000009895	rnpc3	96	56.175	Poecilia_formosa
ENSGAGG00000008438	RNPC3	94	56.539	ENSPLAG00000012023	rnpc3	96	56.574	Poecilia_latipinna
ENSGAGG00000008438	RNPC3	94	56.000	ENSPMEG00000003663	rnpc3	96	56.375	Poecilia_mexicana
ENSGAGG00000008438	RNPC3	94	55.936	ENSPREG00000010206	rnpc3	97	56.313	Poecilia_reticulata
ENSGAGG00000008438	RNPC3	82	62.326	ENSPPYG00000001102	RNPC3	94	64.096	Pongo_abelii
ENSGAGG00000008438	RNPC3	94	57.551	ENSPNYG00000020603	rnpc3	96	57.347	Pundamilia_nyererei
ENSGAGG00000008438	RNPC3	95	53.162	ENSPNAG00000000524	rnpc3	90	52.767	Pygocentrus_nattereri
ENSGAGG00000008438	RNPC3	96	67.913	ENSRNOG00000017310	Rnpc3	96	68.612	Rattus_norvegicus
ENSGAGG00000008438	RNPC3	95	64.990	ENSRBIG00000043897	RNPC3	95	64.990	Rhinopithecus_bieti
ENSGAGG00000008438	RNPC3	95	70.161	ENSRROG00000032334	RNPC3	95	70.161	Rhinopithecus_roxellana
ENSGAGG00000008438	RNPC3	95	69.618	ENSSBOG00000024473	RNPC3	96	69.416	Saimiri_boliviensis_boliviensis
ENSGAGG00000008438	RNPC3	95	72.691	ENSSHAG00000011859	RNPC3	96	72.490	Sarcophilus_harrisii
ENSGAGG00000008438	RNPC3	95	60.081	ENSSFOG00015013055	rnpc3	99	59.674	Scleropages_formosus
ENSGAGG00000008438	RNPC3	95	55.490	ENSSMAG00000020346	rnpc3	97	55.666	Scophthalmus_maximus
ENSGAGG00000008438	RNPC3	94	57.087	ENSSDUG00000006600	rnpc3	97	57.199	Seriola_dumerili
ENSGAGG00000008438	RNPC3	94	56.805	ENSSLDG00000007979	rnpc3	97	57.396	Seriola_lalandi_dorsalis
ENSGAGG00000008438	RNPC3	98	80.392	ENSSPUG00000008539	-	97	80.784	Sphenodon_punctatus
ENSGAGG00000008438	RNPC3	95	74.747	ENSSPUG00000003872	-	93	74.747	Sphenodon_punctatus
ENSGAGG00000008438	RNPC3	94	57.841	ENSSPAG00000005633	rnpc3	97	58.452	Stegastes_partitus
ENSGAGG00000008438	RNPC3	98	68.750	ENSSSCG00000037254	RNPC3	95	70.221	Sus_scrofa
ENSGAGG00000008438	RNPC3	87	80.531	ENSTGUG00000004795	-	100	79.204	Taeniopygia_guttata
ENSGAGG00000008438	RNPC3	94	56.566	ENSTNIG00000018963	rnpc3	97	56.740	Tetraodon_nigroviridis
ENSGAGG00000008438	RNPC3	98	70.117	ENSUMAG00000007775	RNPC3	97	71.429	Ursus_maritimus
ENSGAGG00000008438	RNPC3	98	69.531	ENSVVUG00000000331	RNPC3	95	70.825	Vulpes_vulpes
ENSGAGG00000008438	RNPC3	95	50.298	ENSXETG00000025027	rnpc3	97	48.948	Xenopus_tropicalis
ENSGAGG00000008438	RNPC3	94	55.888	ENSXCOG00000005013	rnpc3	97	56.262	Xiphophorus_couchianus
ENSGAGG00000008438	RNPC3	94	56.436	ENSXMAG00000006495	rnpc3	97	56.487	Xiphophorus_maculatus