EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000008464 (Gene tree)
Gene ID: -
Gene Symbol: TRMT6
Alias: CGI-09|GCD10|Gcd10p|MGC5029
Full Name: tRNA methyltransferase 6
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 23379 bases
Position: chrPPEB01001027.1:240340-263718
Accession: 20900
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000010890	Gcd10p	PF04189.13	5e-69	1	1
ENSGAGP00000010889	Gcd10p	PF04189.13	1.9e-64	1	1
ENSGAGP00000010892	Gcd10p	PF04189.13	2.2e-51	1	2
ENSGAGP00000010892	Gcd10p	PF04189.13	2.2e-51	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000012479	TRMT6-203	2642	-	ENSGAGP00000010892	456 (aa)	-	-
ENSGAGT00000012477	TRMT6-202	2726	-	ENSGAGP00000010890	484 (aa)	-	-
ENSGAGT00000012476	TRMT6-201	2799	-	ENSGAGP00000010889	455 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000008464's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000008464's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000008464	TRMT6	98	75.824	ENSG00000089195	TRMT6	96	75.574	Homo_sapiens
ENSGAGG00000008464	TRMT6	98	60.444	ENSAPOG00000008036	trmt6	99	59.627	Acanthochromis_polyacanthus
ENSGAGG00000008464	TRMT6	98	76.264	ENSAMEG00000010635	TRMT6	96	75.992	Ailuropoda_melanoleuca
ENSGAGG00000008464	TRMT6	98	56.660	ENSACIG00000004608	trmt6	97	56.660	Amphilophus_citrinellus
ENSGAGG00000008464	TRMT6	99	55.487	ENSAOCG00000024322	trmt6	99	55.901	Amphiprion_ocellaris
ENSGAGG00000008464	TRMT6	98	60.889	ENSAPEG00000017334	trmt6	99	59.420	Amphiprion_percula
ENSGAGG00000008464	TRMT6	99	59.471	ENSATEG00000018498	trmt6	98	59.737	Anabas_testudineus
ENSGAGG00000008464	TRMT6	99	85.275	ENSAPLG00000007761	TRMT6	100	85.275	Anas_platyrhynchos
ENSGAGG00000008464	TRMT6	100	76.805	ENSACAG00000000575	TRMT6	98	76.681	Anolis_carolinensis
ENSGAGG00000008464	TRMT6	98	75.604	ENSANAG00000021260	TRMT6	96	75.365	Aotus_nancymaae
ENSGAGG00000008464	TRMT6	98	57.294	ENSACLG00000026034	trmt6	96	56.904	Astatotilapia_calliptera
ENSGAGG00000008464	TRMT6	99	58.444	ENSAMXG00000017116	trmt6	97	58.592	Astyanax_mexicanus
ENSGAGG00000008464	TRMT6	98	75.824	ENSBTAG00000001314	TRMT6	96	75.523	Bos_taurus
ENSGAGG00000008464	TRMT6	99	75.359	ENSCJAG00000021296	TRMT6	97	75.154	Callithrix_jacchus
ENSGAGG00000008464	TRMT6	98	76.264	ENSCAFG00000005969	TRMT6	96	75.783	Canis_familiaris
ENSGAGG00000008464	TRMT6	98	76.264	ENSCAFG00020000777	TRMT6	99	74.044	Canis_lupus_dingo
ENSGAGG00000008464	TRMT6	98	75.824	ENSCHIG00000010338	TRMT6	96	75.523	Capra_hircus
ENSGAGG00000008464	TRMT6	98	77.434	ENSTSYG00000004286	TRMT6	96	76.569	Carlito_syrichta
ENSGAGG00000008464	TRMT6	89	73.430	ENSCAPG00000015467	TRMT6	93	72.947	Cavia_aperea
ENSGAGG00000008464	TRMT6	98	73.695	ENSCPOG00000013809	TRMT6	96	73.695	Cavia_porcellus
ENSGAGG00000008464	TRMT6	98	76.044	ENSCCAG00000026939	TRMT6	96	75.157	Cebus_capucinus
ENSGAGG00000008464	TRMT6	98	76.484	ENSCATG00000041111	TRMT6	96	76.200	Cercocebus_atys
ENSGAGG00000008464	TRMT6	98	74.393	ENSCLAG00000013978	TRMT6	95	74.526	Chinchilla_lanigera
ENSGAGG00000008464	TRMT6	98	76.703	ENSCSAG00000013461	TRMT6	96	76.409	Chlorocebus_sabaeus
ENSGAGG00000008464	TRMT6	74	66.205	ENSCHOG00000012537	TRMT6	72	66.111	Choloepus_hoffmanni
ENSGAGG00000008464	TRMT6	100	96.901	ENSCPBG00000023406	TRMT6	100	96.901	Chrysemys_picta_bellii
ENSGAGG00000008464	TRMT6	93	34.014	ENSCING00000002472	-	93	34.467	Ciona_intestinalis
ENSGAGG00000008464	TRMT6	92	37.500	ENSCSAVG00000001680	-	94	37.705	Ciona_savignyi
ENSGAGG00000008464	TRMT6	98	76.264	ENSCANG00000002381	TRMT6	96	75.992	Colobus_angolensis_palliatus
ENSGAGG00000008464	TRMT6	98	74.779	ENSCGRG00001003385	Trmt6	95	74.105	Cricetulus_griseus_chok1gshd
ENSGAGG00000008464	TRMT6	98	74.779	ENSCGRG00000006540	Trmt6	95	74.105	Cricetulus_griseus_crigri
ENSGAGG00000008464	TRMT6	99	57.522	ENSCSEG00000002228	trmt6	97	58.263	Cynoglossus_semilaevis
ENSGAGG00000008464	TRMT6	98	58.193	ENSCVAG00000000341	trmt6	97	58.403	Cyprinodon_variegatus
ENSGAGG00000008464	TRMT6	98	58.737	ENSDARG00000042344	trmt6	95	57.474	Danio_rerio
ENSGAGG00000008464	TRMT6	98	72.451	ENSDNOG00000012785	TRMT6	96	72.165	Dasypus_novemcinctus
ENSGAGG00000008464	TRMT6	99	72.895	ENSDORG00000006458	Trmt6	98	72.690	Dipodomys_ordii
ENSGAGG00000008464	TRMT6	82	31.200	FBgn0031832	CG9596	75	31.720	Drosophila_melanogaster
ENSGAGG00000008464	TRMT6	61	48.936	ENSETEG00000017282	-	90	48.936	Echinops_telfairi
ENSGAGG00000008464	TRMT6	54	85.606	ENSETEG00000003490	-	51	85.606	Echinops_telfairi
ENSGAGG00000008464	TRMT6	99	76.096	ENSEASG00005001411	TRMT6	96	76.200	Equus_asinus_asinus
ENSGAGG00000008464	TRMT6	99	75.877	ENSECAG00000023914	TRMT6	96	75.992	Equus_caballus
ENSGAGG00000008464	TRMT6	99	75.109	ENSEEUG00000006635	TRMT6	98	74.590	Erinaceus_europaeus
ENSGAGG00000008464	TRMT6	98	58.720	ENSELUG00000013378	trmt6	78	58.889	Esox_lucius
ENSGAGG00000008464	TRMT6	98	76.264	ENSFCAG00000003102	TRMT6	96	75.992	Felis_catus
ENSGAGG00000008464	TRMT6	99	85.366	ENSFALG00000013575	TRMT6	99	85.366	Ficedula_albicollis
ENSGAGG00000008464	TRMT6	99	72.895	ENSFDAG00000015117	TRMT6	97	72.895	Fukomys_damarensis
ENSGAGG00000008464	TRMT6	98	56.933	ENSFHEG00000019957	trmt6	98	56.933	Fundulus_heteroclitus
ENSGAGG00000008464	TRMT6	83	65.532	ENSGMOG00000011059	trmt6	97	64.961	Gadus_morhua
ENSGAGG00000008464	TRMT6	99	83.186	ENSGALG00000009169	TRMT6	98	82.947	Gallus_gallus
ENSGAGG00000008464	TRMT6	98	57.384	ENSGAFG00000008618	trmt6	97	57.717	Gambusia_affinis
ENSGAGG00000008464	TRMT6	98	58.315	ENSGACG00000012471	trmt6	97	57.595	Gasterosteus_aculeatus
ENSGAGG00000008464	TRMT6	98	76.044	ENSGGOG00000008597	TRMT6	96	75.783	Gorilla_gorilla
ENSGAGG00000008464	TRMT6	98	57.294	ENSHBUG00000016631	trmt6	97	56.904	Haplochromis_burtoni
ENSGAGG00000008464	TRMT6	99	74.561	ENSHGLG00000015405	TRMT6	98	73.211	Heterocephalus_glaber_female
ENSGAGG00000008464	TRMT6	99	74.561	ENSHGLG00100004120	TRMT6	98	73.211	Heterocephalus_glaber_male
ENSGAGG00000008464	TRMT6	98	57.489	ENSHCOG00000000118	trmt6	97	55.828	Hippocampus_comes
ENSGAGG00000008464	TRMT6	98	58.720	ENSIPUG00000019365	trmt6	98	58.700	Ictalurus_punctatus
ENSGAGG00000008464	TRMT6	98	74.066	ENSSTOG00000006863	TRMT6	96	73.486	Ictidomys_tridecemlineatus
ENSGAGG00000008464	TRMT6	99	72.609	ENSJJAG00000007315	Trmt6	95	73.069	Jaculus_jaculus
ENSGAGG00000008464	TRMT6	99	58.079	ENSKMAG00000001295	trmt6	98	58.091	Kryptolebias_marmoratus
ENSGAGG00000008464	TRMT6	99	56.442	ENSLBEG00000025654	trmt6	99	55.828	Labrus_bergylta
ENSGAGG00000008464	TRMT6	98	67.550	ENSLACG00000016478	TRMT6	98	65.779	Latimeria_chalumnae
ENSGAGG00000008464	TRMT6	98	63.797	ENSLOCG00000016451	trmt6	97	63.866	Lepisosteus_oculatus
ENSGAGG00000008464	TRMT6	99	75.439	ENSLAFG00000032216	TRMT6	96	75.365	Loxodonta_africana
ENSGAGG00000008464	TRMT6	98	76.484	ENSMFAG00000044360	TRMT6	96	76.200	Macaca_fascicularis
ENSGAGG00000008464	TRMT6	98	76.484	ENSMMUG00000013728	TRMT6	96	76.200	Macaca_mulatta
ENSGAGG00000008464	TRMT6	98	76.484	ENSMNEG00000041831	TRMT6	96	76.200	Macaca_nemestrina
ENSGAGG00000008464	TRMT6	98	76.923	ENSMLEG00000040762	TRMT6	96	76.409	Mandrillus_leucophaeus
ENSGAGG00000008464	TRMT6	98	59.911	ENSMAMG00000012101	trmt6	97	59.746	Mastacembelus_armatus
ENSGAGG00000008464	TRMT6	98	57.294	ENSMZEG00005010771	trmt6	96	56.904	Maylandia_zebra
ENSGAGG00000008464	TRMT6	99	83.628	ENSMGAG00000007678	TRMT6	99	82.438	Meleagris_gallopavo
ENSGAGG00000008464	TRMT6	98	74.779	ENSMAUG00000008719	Trmt6	95	74.105	Mesocricetus_auratus
ENSGAGG00000008464	TRMT6	98	75.165	ENSMICG00000011626	TRMT6	96	75.208	Microcebus_murinus
ENSGAGG00000008464	TRMT6	98	74.779	ENSMOCG00000022320	Trmt6	95	74.526	Microtus_ochrogaster
ENSGAGG00000008464	TRMT6	99	52.643	ENSMMOG00000004412	trmt6	91	64.844	Mola_mola
ENSGAGG00000008464	TRMT6	99	74.066	ENSMODG00000003784	TRMT6	97	73.651	Monodelphis_domestica
ENSGAGG00000008464	TRMT6	98	56.000	ENSMALG00000018140	trmt6	95	55.696	Monopterus_albus
ENSGAGG00000008464	TRMT6	98	72.967	MGP_CAROLIEiJ_G0024344	Trmt6	95	72.803	Mus_caroli
ENSGAGG00000008464	TRMT6	98	72.967	ENSMUSG00000037376	Trmt6	95	73.013	Mus_musculus
ENSGAGG00000008464	TRMT6	98	74.286	MGP_PahariEiJ_G0025789	Trmt6	95	73.125	Mus_pahari
ENSGAGG00000008464	TRMT6	98	72.747	MGP_SPRETEiJ_G0025264	Trmt6	95	72.594	Mus_spretus
ENSGAGG00000008464	TRMT6	87	77.722	ENSMPUG00000006317	TRMT6	89	76.850	Mustela_putorius_furo
ENSGAGG00000008464	TRMT6	99	75.658	ENSMLUG00000006491	TRMT6	96	75.365	Myotis_lucifugus
ENSGAGG00000008464	TRMT6	98	72.527	ENSNGAG00000015251	Trmt6	95	71.757	Nannospalax_galili
ENSGAGG00000008464	TRMT6	98	54.545	ENSNBRG00000020261	trmt6	97	54.545	Neolamprologus_brichardi
ENSGAGG00000008464	TRMT6	98	76.044	ENSNLEG00000013957	TRMT6	96	75.992	Nomascus_leucogenys
ENSGAGG00000008464	TRMT6	87	74.684	ENSMEUG00000009179	TRMT6	99	74.641	Notamacropus_eugenii
ENSGAGG00000008464	TRMT6	99	74.398	ENSOPRG00000008564	TRMT6	99	73.523	Ochotona_princeps
ENSGAGG00000008464	TRMT6	98	74.948	ENSODEG00000005657	TRMT6	96	74.530	Octodon_degus
ENSGAGG00000008464	TRMT6	98	57.928	ENSONIG00000000968	trmt6	97	57.294	Oreochromis_niloticus
ENSGAGG00000008464	TRMT6	99	80.973	ENSOANG00000008403	-	100	80.973	Ornithorhynchus_anatinus
ENSGAGG00000008464	TRMT6	98	76.380	ENSOCUG00000014669	TRMT6	95	76.211	Oryctolagus_cuniculus
ENSGAGG00000008464	TRMT6	98	56.541	ENSORLG00000009862	trmt6	97	56.211	Oryzias_latipes
ENSGAGG00000008464	TRMT6	98	56.319	ENSORLG00020001466	trmt6	97	56.000	Oryzias_latipes_hni
ENSGAGG00000008464	TRMT6	98	56.098	ENSORLG00015015552	trmt6	97	56.211	Oryzias_latipes_hsok
ENSGAGG00000008464	TRMT6	98	55.902	ENSOMEG00000019874	trmt6	97	55.115	Oryzias_melastigma
ENSGAGG00000008464	TRMT6	98	74.322	ENSOGAG00000012950	TRMT6	96	73.760	Otolemur_garnettii
ENSGAGG00000008464	TRMT6	98	75.824	ENSOARG00000017993	TRMT6	96	75.523	Ovis_aries
ENSGAGG00000008464	TRMT6	98	75.000	ENSPPAG00000036809	TRMT6	96	74.792	Pan_paniscus
ENSGAGG00000008464	TRMT6	98	76.264	ENSPPRG00000000424	TRMT6	96	75.992	Panthera_pardus
ENSGAGG00000008464	TRMT6	98	76.264	ENSPTIG00000010629	TRMT6	96	75.992	Panthera_tigris_altaica
ENSGAGG00000008464	TRMT6	98	76.044	ENSPTRG00000013231	TRMT6	96	75.783	Pan_troglodytes
ENSGAGG00000008464	TRMT6	98	76.703	ENSPANG00000009284	TRMT6	96	76.409	Papio_anubis
ENSGAGG00000008464	TRMT6	98	61.693	ENSPKIG00000003441	trmt6	96	60.805	Paramormyrops_kingsleyae
ENSGAGG00000008464	TRMT6	99	92.274	ENSPSIG00000017048	TRMT6	99	91.942	Pelodiscus_sinensis
ENSGAGG00000008464	TRMT6	90	55.825	ENSPMGG00000021074	trmt6	89	56.713	Periophthalmus_magnuspinnatus
ENSGAGG00000008464	TRMT6	98	73.451	ENSPEMG00000023268	Trmt6	95	73.263	Peromyscus_maniculatus_bairdii
ENSGAGG00000008464	TRMT6	98	75.501	ENSPCIG00000001546	TRMT6	93	75.212	Phascolarctos_cinereus
ENSGAGG00000008464	TRMT6	98	56.432	ENSPFOG00000003037	trmt6	97	56.432	Poecilia_formosa
ENSGAGG00000008464	TRMT6	98	57.143	ENSPLAG00000005143	trmt6	97	56.933	Poecilia_latipinna
ENSGAGG00000008464	TRMT6	98	57.717	ENSPMEG00000014875	trmt6	97	56.933	Poecilia_mexicana
ENSGAGG00000008464	TRMT6	98	53.911	ENSPREG00000016227	trmt6	96	65.942	Poecilia_reticulata
ENSGAGG00000008464	TRMT6	98	76.484	ENSPPYG00000010691	TRMT6	96	76.200	Pongo_abelii
ENSGAGG00000008464	TRMT6	99	75.439	ENSPCAG00000012098	TRMT6	97	74.949	Procavia_capensis
ENSGAGG00000008464	TRMT6	98	74.948	ENSPCOG00000020723	TRMT6	96	74.948	Propithecus_coquereli
ENSGAGG00000008464	TRMT6	98	72.088	ENSPVAG00000007539	TRMT6	96	72.025	Pteropus_vampyrus
ENSGAGG00000008464	TRMT6	98	56.347	ENSPNYG00000000918	trmt6	98	56.356	Pundamilia_nyererei
ENSGAGG00000008464	TRMT6	99	59.735	ENSPNAG00000019279	trmt6	96	58.613	Pygocentrus_nattereri
ENSGAGG00000008464	TRMT6	98	73.246	ENSRNOG00000021270	Trmt6	95	73.849	Rattus_norvegicus
ENSGAGG00000008464	TRMT6	99	75.359	ENSRBIG00000031132	TRMT6	97	75.154	Rhinopithecus_bieti
ENSGAGG00000008464	TRMT6	99	75.770	ENSRROG00000045329	TRMT6	97	75.565	Rhinopithecus_roxellana
ENSGAGG00000008464	TRMT6	66	32.680	YNL062C	GCD10	63	30.065	Saccharomyces_cerevisiae
ENSGAGG00000008464	TRMT6	80	73.190	ENSSBOG00000019803	-	90	72.922	Saimiri_boliviensis_boliviensis
ENSGAGG00000008464	TRMT6	98	75.604	ENSSBOG00000033602	-	96	75.157	Saimiri_boliviensis_boliviensis
ENSGAGG00000008464	TRMT6	98	73.942	ENSSHAG00000010754	TRMT6	93	73.729	Sarcophilus_harrisii
ENSGAGG00000008464	TRMT6	98	64.444	ENSSFOG00015008429	trmt6	97	63.636	Scleropages_formosus
ENSGAGG00000008464	TRMT6	98	58.797	ENSSMAG00000005352	trmt6	98	58.613	Scophthalmus_maximus
ENSGAGG00000008464	TRMT6	98	59.243	ENSSDUG00000008294	trmt6	97	59.408	Seriola_dumerili
ENSGAGG00000008464	TRMT6	98	59.161	ENSSLDG00000002180	trmt6	97	59.408	Seriola_lalandi_dorsalis
ENSGAGG00000008464	TRMT6	98	69.248	ENSSARG00000005487	TRMT6	95	69.328	Sorex_araneus
ENSGAGG00000008464	TRMT6	99	59.129	ENSSPAG00000011628	trmt6	99	58.351	Stegastes_partitus
ENSGAGG00000008464	TRMT6	98	76.044	ENSSSCG00000007046	TRMT6	69	75.732	Sus_scrofa
ENSGAGG00000008464	TRMT6	99	85.146	ENSTGUG00000002195	TRMT6	99	85.146	Taeniopygia_guttata
ENSGAGG00000008464	TRMT6	99	53.422	ENSTRUG00000007153	trmt6	96	53.700	Takifugu_rubripes
ENSGAGG00000008464	TRMT6	98	55.752	ENSTNIG00000010726	TRMT6	97	55.672	Tetraodon_nigroviridis
ENSGAGG00000008464	TRMT6	73	74.497	ENSTBEG00000016317	TRMT6	73	74.497	Tupaia_belangeri
ENSGAGG00000008464	TRMT6	98	76.432	ENSTTRG00000012889	TRMT6	96	75.574	Tursiops_truncatus
ENSGAGG00000008464	TRMT6	98	75.604	ENSUAMG00000008674	TRMT6	96	75.365	Ursus_americanus
ENSGAGG00000008464	TRMT6	98	76.264	ENSUMAG00000004999	TRMT6	96	75.992	Ursus_maritimus
ENSGAGG00000008464	TRMT6	98	75.551	ENSVPAG00000002371	TRMT6	96	74.174	Vicugna_pacos
ENSGAGG00000008464	TRMT6	98	76.264	ENSVVUG00000023370	TRMT6	96	75.992	Vulpes_vulpes
ENSGAGG00000008464	TRMT6	99	67.473	ENSXETG00000004501	trmt6	98	66.946	Xenopus_tropicalis
ENSGAGG00000008464	TRMT6	98	52.854	ENSXCOG00000007761	trmt6	97	62.681	Xiphophorus_couchianus
ENSGAGG00000008464	TRMT6	98	57.294	ENSXMAG00000008592	trmt6	97	57.082	Xiphophorus_maculatus