EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000008536 (Gene tree)
Gene ID: -
Gene Symbol: ALYREF
Alias: ALY|ALY/REF|BEF|REF|THOC4
Full Name: Aly/REF export factor
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 8510 bases
Position: chrPPEB01002676.1:183521-192030
Accession: 19071
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000011020	RRM_1	PF00076.22	1.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000012618	ALYREF-201	1326	-	ENSGAGP00000011020	258 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000008536's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000008536's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000008536	ALYREF	100	82.061	ENSG00000183684	ALYREF	97	82.824	Homo_sapiens
ENSGAGG00000008536	ALYREF	100	69.343	ENSAPOG00000018455	ALYREF	100	71.168	Acanthochromis_polyacanthus
ENSGAGG00000008536	ALYREF	79	84.360	ENSAMEG00000017463	ALYREF	74	90.270	Ailuropoda_melanoleuca
ENSGAGG00000008536	ALYREF	100	82.239	ENSACAG00000010526	ALYREF	100	80.695	Anolis_carolinensis
ENSGAGG00000008536	ALYREF	69	92.135	ENSANAG00000022638	-	87	82.524	Aotus_nancymaae
ENSGAGG00000008536	ALYREF	100	74.046	ENSANAG00000028229	-	78	72.137	Aotus_nancymaae
ENSGAGG00000008536	ALYREF	100	82.443	ENSBTAG00000008498	ALYREF	100	83.588	Bos_taurus
ENSGAGG00000008536	ALYREF	100	81.679	ENSCJAG00000039942	ALYREF	97	82.443	Callithrix_jacchus
ENSGAGG00000008536	ALYREF	100	82.443	ENSCAFG00000005877	ALYREF	100	83.588	Canis_familiaris
ENSGAGG00000008536	ALYREF	100	82.443	ENSCAFG00020009815	ALYREF	100	83.588	Canis_lupus_dingo
ENSGAGG00000008536	ALYREF	100	81.749	ENSCHIG00000017396	ALYREF	97	82.890	Capra_hircus
ENSGAGG00000008536	ALYREF	82	81.991	ENSTSYG00000002272	ALYREF	69	93.182	Carlito_syrichta
ENSGAGG00000008536	ALYREF	52	91.852	ENSCAPG00000014727	-	100	89.630	Cavia_aperea
ENSGAGG00000008536	ALYREF	100	82.061	ENSCPOG00000013710	ALYREF	100	80.916	Cavia_porcellus
ENSGAGG00000008536	ALYREF	100	84.351	ENSCCAG00000020578	-	97	83.206	Cebus_capucinus
ENSGAGG00000008536	ALYREF	100	71.318	ENSCCAG00000030237	-	100	69.767	Cebus_capucinus
ENSGAGG00000008536	ALYREF	100	82.443	ENSCATG00000033169	ALYREF	97	83.206	Cercocebus_atys
ENSGAGG00000008536	ALYREF	100	78.295	ENSCLAG00000015026	ALYREF	100	78.295	Chinchilla_lanigera
ENSGAGG00000008536	ALYREF	100	82.443	ENSCSAG00000002216	ALYREF	97	83.206	Chlorocebus_sabaeus
ENSGAGG00000008536	ALYREF	71	91.209	ENSCANG00000034056	ALYREF	95	82.979	Colobus_angolensis_palliatus
ENSGAGG00000008536	ALYREF	100	82.759	ENSCGRG00001018191	-	100	81.226	Cricetulus_griseus_chok1gshd
ENSGAGG00000008536	ALYREF	74	87.958	ENSCGRG00000015871	-	94	80.102	Cricetulus_griseus_crigri
ENSGAGG00000008536	ALYREF	72	56.186	ENSCSEG00000015438	-	98	56.701	Cynoglossus_semilaevis
ENSGAGG00000008536	ALYREF	69	93.296	ENSDNOG00000002563	ALYREF	84	88.500	Dasypus_novemcinctus
ENSGAGG00000008536	ALYREF	91	77.021	ENSDORG00000025849	-	73	92.222	Dipodomys_ordii
ENSGAGG00000008536	ALYREF	69	92.737	ENSETEG00000016596	ALYREF	100	90.503	Echinops_telfairi
ENSGAGG00000008536	ALYREF	100	82.061	ENSEASG00005005824	ALYREF	95	83.206	Equus_asinus_asinus
ENSGAGG00000008536	ALYREF	100	82.061	ENSECAG00000018754	ALYREF	95	83.206	Equus_caballus
ENSGAGG00000008536	ALYREF	67	77.966	ENSEEUG00000010164	ALYREF	100	80.682	Erinaceus_europaeus
ENSGAGG00000008536	ALYREF	100	82.443	ENSFCAG00000022549	ALYREF	98	83.588	Felis_catus
ENSGAGG00000008536	ALYREF	78	85.644	ENSFDAG00000001213	ALYREF	90	85.930	Fukomys_damarensis
ENSGAGG00000008536	ALYREF	100	87.209	ENSGALG00000007237	ALYREF	100	85.659	Gallus_gallus
ENSGAGG00000008536	ALYREF	100	71.648	ENSGACG00000013328	ALYREF	100	71.264	Gasterosteus_aculeatus
ENSGAGG00000008536	ALYREF	100	82.443	ENSGGOG00000013935	ALYREF	99	82.510	Gorilla_gorilla
ENSGAGG00000008536	ALYREF	100	82.375	ENSHGLG00000008293	ALYREF	100	82.759	Heterocephalus_glaber_female
ENSGAGG00000008536	ALYREF	80	78.509	ENSHGLG00100006949	ALYREF	88	84.058	Heterocephalus_glaber_male
ENSGAGG00000008536	ALYREF	100	67.669	ENSHCOG00000015046	ALYREF	100	69.030	Hippocampus_comes
ENSGAGG00000008536	ALYREF	100	80.608	ENSJJAG00000004134	-	100	79.771	Jaculus_jaculus
ENSGAGG00000008536	ALYREF	100	74.046	ENSLACG00000005694	ALYREF	100	75.573	Latimeria_chalumnae
ENSGAGG00000008536	ALYREF	73	92.593	ENSLAFG00000003083	ALYREF	100	91.534	Loxodonta_africana
ENSGAGG00000008536	ALYREF	100	83.333	ENSMFAG00000001394	ALYREF	97	82.946	Macaca_fascicularis
ENSGAGG00000008536	ALYREF	100	82.443	ENSMMUG00000012884	ALYREF	97	83.206	Macaca_mulatta
ENSGAGG00000008536	ALYREF	100	82.443	ENSMNEG00000043666	ALYREF	97	83.206	Macaca_nemestrina
ENSGAGG00000008536	ALYREF	72	84.293	ENSMLEG00000043353	ALYREF	87	82.723	Mandrillus_leucophaeus
ENSGAGG00000008536	ALYREF	100	76.426	ENSMAUG00000020552	-	100	74.419	Mesocricetus_auratus
ENSGAGG00000008536	ALYREF	100	80.916	ENSMICG00000017403	ALYREF	97	80.916	Microcebus_murinus
ENSGAGG00000008536	ALYREF	100	79.537	ENSMOCG00000016792	-	100	75.573	Microtus_ochrogaster
ENSGAGG00000008536	ALYREF	99	83.525	ENSMODG00000003030	ALYREF	84	83.908	Monodelphis_domestica
ENSGAGG00000008536	ALYREF	100	69.004	ENSMALG00000019408	ALYREF	100	70.849	Monopterus_albus
ENSGAGG00000008536	ALYREF	100	70.543	MGP_CAROLIEiJ_G0014874	Alyref2	100	69.767	Mus_caroli
ENSGAGG00000008536	ALYREF	100	81.992	MGP_CAROLIEiJ_G0017529	Alyref	100	81.226	Mus_caroli
ENSGAGG00000008536	ALYREF	91	62.288	ENSMUSG00000094314	Gm4301	62	62.189	Mus_musculus
ENSGAGG00000008536	ALYREF	100	58.042	ENSMUSG00000094144	Gm21312	100	53.169	Mus_musculus
ENSGAGG00000008536	ALYREF	100	58.271	ENSMUSG00000117091	AC153137.1	100	56.818	Mus_musculus
ENSGAGG00000008536	ALYREF	91	62.128	ENSMUSG00000112856	Gm4305	62	64.179	Mus_musculus
ENSGAGG00000008536	ALYREF	100	58.042	ENSMUSG00000091779	Gm21293	100	53.169	Mus_musculus
ENSGAGG00000008536	ALYREF	91	62.288	ENSMUSG00000091101	Gm4302	61	64.179	Mus_musculus
ENSGAGG00000008536	ALYREF	100	81.992	ENSMUSG00000025134	Alyref	100	81.226	Mus_musculus
ENSGAGG00000008536	ALYREF	100	58.042	ENSMUSG00000095022	Gm20765	100	53.169	Mus_musculus
ENSGAGG00000008536	ALYREF	100	70.543	ENSMUSG00000060244	Alyref2	100	67.829	Mus_musculus
ENSGAGG00000008536	ALYREF	91	62.288	ENSMUSG00000096640	Gm4312	62	62.189	Mus_musculus
ENSGAGG00000008536	ALYREF	100	58.042	ENSMUSG00000097878	Gm8764	98	60.241	Mus_musculus
ENSGAGG00000008536	ALYREF	100	58.042	ENSMUSG00000097427	Gm6763	98	60.241	Mus_musculus
ENSGAGG00000008536	ALYREF	100	58.042	ENSMUSG00000097550	Gm21304	100	53.169	Mus_musculus
ENSGAGG00000008536	ALYREF	91	62.128	ENSMUSG00000096744	Gm4307	62	64.179	Mus_musculus
ENSGAGG00000008536	ALYREF	100	59.176	ENSMUSG00000086727	4931428L18Rik	100	55.303	Mus_musculus
ENSGAGG00000008536	ALYREF	100	57.241	ENSMUSG00000090854	Gm4340	100	51.736	Mus_musculus
ENSGAGG00000008536	ALYREF	91	62.128	ENSMUSG00000112931	Gm4303	62	64.179	Mus_musculus
ENSGAGG00000008536	ALYREF	82	65.566	MGP_PahariEiJ_G0027254	-	81	64.677	Mus_pahari
ENSGAGG00000008536	ALYREF	82	65.566	MGP_PahariEiJ_G0027255	-	79	64.677	Mus_pahari
ENSGAGG00000008536	ALYREF	73	81.250	MGP_PahariEiJ_G0018656	-	99	81.771	Mus_pahari
ENSGAGG00000008536	ALYREF	100	81.992	MGP_PahariEiJ_G0018655	-	100	81.226	Mus_pahari
ENSGAGG00000008536	ALYREF	100	70.155	MGP_SPRETEiJ_G0015679	Alyref2	100	67.442	Mus_spretus
ENSGAGG00000008536	ALYREF	100	81.992	MGP_SPRETEiJ_G0018373	Alyref	100	81.226	Mus_spretus
ENSGAGG00000008536	ALYREF	69	54.825	MGP_SPRETEiJ_G0016590	-	54	75.410	Mus_spretus
ENSGAGG00000008536	ALYREF	98	59.608	ENSMLUG00000030407	-	77	59.216	Myotis_lucifugus
ENSGAGG00000008536	ALYREF	98	59.684	ENSMLUG00000024447	-	76	57.312	Myotis_lucifugus
ENSGAGG00000008536	ALYREF	98	57.812	ENSMLUG00000022869	-	69	60.804	Myotis_lucifugus
ENSGAGG00000008536	ALYREF	98	61.265	ENSMLUG00000027352	-	77	60.474	Myotis_lucifugus
ENSGAGG00000008536	ALYREF	98	62.745	ENSMLUG00000025677	-	77	61.176	Myotis_lucifugus
ENSGAGG00000008536	ALYREF	98	60.079	ENSMLUG00000024976	-	79	59.449	Myotis_lucifugus
ENSGAGG00000008536	ALYREF	98	56.154	ENSMLUG00000024471	-	82	52.692	Myotis_lucifugus
ENSGAGG00000008536	ALYREF	98	66.008	ENSMLUG00000027516	-	78	66.798	Myotis_lucifugus
ENSGAGG00000008536	ALYREF	98	55.814	ENSMLUG00000015043	-	98	53.876	Myotis_lucifugus
ENSGAGG00000008536	ALYREF	98	63.281	ENSMLUG00000002626	-	98	58.594	Myotis_lucifugus
ENSGAGG00000008536	ALYREF	88	57.709	ENSMLUG00000028343	-	85	64.045	Myotis_lucifugus
ENSGAGG00000008536	ALYREF	100	50.735	ENSMLUG00000023213	-	100	49.442	Myotis_lucifugus
ENSGAGG00000008536	ALYREF	98	61.905	ENSMLUG00000026271	-	79	59.524	Myotis_lucifugus
ENSGAGG00000008536	ALYREF	73	88.889	ENSMLUG00000009555	-	68	87.831	Myotis_lucifugus
ENSGAGG00000008536	ALYREF	100	82.443	ENSNLEG00000010313	ALYREF	97	83.206	Nomascus_leucogenys
ENSGAGG00000008536	ALYREF	79	69.712	ENSMEUG00000002210	ALYREF	89	70.244	Notamacropus_eugenii
ENSGAGG00000008536	ALYREF	52	89.630	ENSOPRG00000005551	-	52	88.889	Ochotona_princeps
ENSGAGG00000008536	ALYREF	100	80.377	ENSODEG00000008359	ALYREF	100	81.509	Octodon_degus
ENSGAGG00000008536	ALYREF	100	68.613	ENSORLG00000012331	ALYREF	100	70.000	Oryzias_latipes
ENSGAGG00000008536	ALYREF	70	91.713	ENSOGAG00000012409	ALYREF	76	90.055	Otolemur_garnettii
ENSGAGG00000008536	ALYREF	69	94.413	ENSOARG00000017932	ALYREF	67	94.413	Ovis_aries
ENSGAGG00000008536	ALYREF	100	82.443	ENSPPRG00000010829	ALYREF	98	83.588	Panthera_pardus
ENSGAGG00000008536	ALYREF	57	95.890	ENSPTIG00000006399	ALYREF	81	95.890	Panthera_tigris_altaica
ENSGAGG00000008536	ALYREF	100	82.443	ENSPTRG00000009774	ALYREF	97	83.206	Pan_troglodytes
ENSGAGG00000008536	ALYREF	100	82.443	ENSPANG00000019265	ALYREF	97	83.206	Papio_anubis
ENSGAGG00000008536	ALYREF	52	98.496	ENSPSIG00000017541	ALYREF	98	98.496	Pelodiscus_sinensis
ENSGAGG00000008536	ALYREF	100	82.443	ENSPPYG00000008749	ALYREF	97	83.206	Pongo_abelii
ENSGAGG00000008536	ALYREF	100	80.916	ENSPCOG00000020874	ALYREF	97	80.916	Propithecus_coquereli
ENSGAGG00000008536	ALYREF	100	72.973	ENSPVAG00000017866	ALYREF	69	91.061	Pteropus_vampyrus
ENSGAGG00000008536	ALYREF	67	77.401	ENSRNOG00000036687	Alyref	91	79.545	Rattus_norvegicus
ENSGAGG00000008536	ALYREF	84	80.093	ENSRBIG00000039651	ALYREF	74	90.659	Rhinopithecus_bieti
ENSGAGG00000008536	ALYREF	93	78.138	ENSRROG00000045364	ALYREF	80	89.806	Rhinopithecus_roxellana
ENSGAGG00000008536	ALYREF	74	90.052	ENSSHAG00000010459	ALYREF	98	90.052	Sarcophilus_harrisii
ENSGAGG00000008536	ALYREF	100	52.158	ENSSDUG00000003992	-	100	53.237	Seriola_dumerili
ENSGAGG00000008536	ALYREF	100	53.091	ENSSLDG00000005386	-	100	53.818	Seriola_lalandi_dorsalis
ENSGAGG00000008536	ALYREF	100	91.120	ENSSPUG00000004600	ALYREF	100	88.417	Sphenodon_punctatus
ENSGAGG00000008536	ALYREF	100	70.182	ENSSPAG00000011178	ALYREF	97	69.818	Stegastes_partitus
ENSGAGG00000008536	ALYREF	100	83.525	ENSSSCG00000032655	ALYREF	100	83.908	Sus_scrofa
ENSGAGG00000008536	ALYREF	52	94.737	ENSTGUG00000003513	ALYREF	100	89.706	Taeniopygia_guttata
ENSGAGG00000008536	ALYREF	100	70.260	ENSTRUG00000008828	ALYREF	100	69.663	Takifugu_rubripes
ENSGAGG00000008536	ALYREF	69	93.296	ENSTBEG00000005834	ALYREF	100	93.855	Tupaia_belangeri
ENSGAGG00000008536	ALYREF	100	80.916	ENSTTRG00000012275	ALYREF	100	82.061	Tursiops_truncatus
ENSGAGG00000008536	ALYREF	69	80.899	ENSUAMG00000016931	ALYREF	66	79.775	Ursus_americanus
ENSGAGG00000008536	ALYREF	69	80.899	ENSUMAG00000016384	ALYREF	65	79.775	Ursus_maritimus
ENSGAGG00000008536	ALYREF	100	81.369	ENSXETG00000005391	alyref	100	81.298	Xenopus_tropicalis