EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000008582 (Gene tree)
Gene ID: -
Gene Symbol: SMARCAD1
Alias: DKFZP762K2015|ETL1|KIAA1122
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 69312 bases
Position: chrPPEB01002684.1:103437-172748
Accession: 18398
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000011095	ResIII	PF04851.15	2.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000012702	SMARCAD1-201	3235	-	ENSGAGP00000011095	1027 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000008582's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000008582's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000008582	SMARCAD1	50	36.711	ENSGAGG00000013176	-	55	36.590
ENSGAGG00000008582	SMARCAD1	50	37.615	ENSGAGG00000010269	HELLS	79	37.431

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000008582	SMARCAD1	100	74.035	ENSG00000163104	SMARCAD1	100	85.260	Homo_sapiens
ENSGAGG00000008582	SMARCAD1	82	64.069	ENSAPOG00000011446	smarcad1a	87	64.069	Acanthochromis_polyacanthus
ENSGAGG00000008582	SMARCAD1	100	73.796	ENSAMEG00000005844	SMARCAD1	100	73.608	Ailuropoda_melanoleuca
ENSGAGG00000008582	SMARCAD1	68	69.533	ENSACIG00000018326	smarcad1a	92	65.257	Amphilophus_citrinellus
ENSGAGG00000008582	SMARCAD1	96	64.069	ENSAOCG00000019762	smarcad1a	92	64.069	Amphiprion_ocellaris
ENSGAGG00000008582	SMARCAD1	99	64.214	ENSAPEG00000003889	smarcad1a	92	64.214	Amphiprion_percula
ENSGAGG00000008582	SMARCAD1	78	65.140	ENSATEG00000015608	smarcad1a	92	62.345	Anabas_testudineus
ENSGAGG00000008582	SMARCAD1	93	81.282	ENSAPLG00000004630	SMARCAD1	100	82.006	Anas_platyrhynchos
ENSGAGG00000008582	SMARCAD1	100	74.250	ENSACAG00000013554	SMARCAD1	100	74.056	Anolis_carolinensis
ENSGAGG00000008582	SMARCAD1	100	73.699	ENSANAG00000020488	SMARCAD1	99	77.288	Aotus_nancymaae
ENSGAGG00000008582	SMARCAD1	100	50.319	ENSACLG00000017063	smarcad1a	91	55.911	Astatotilapia_calliptera
ENSGAGG00000008582	SMARCAD1	66	62.482	ENSAMXG00000015470	smarcad1a	95	62.482	Astyanax_mexicanus
ENSGAGG00000008582	SMARCAD1	80	56.532	ENSAMXG00000019130	smarcad1b	99	51.616	Astyanax_mexicanus
ENSGAGG00000008582	SMARCAD1	100	73.917	ENSBTAG00000017061	SMARCAD1	100	73.538	Bos_taurus
ENSGAGG00000008582	SMARCAD1	60	43.689	WBGene00010845	M03C11.8	63	43.146	Caenorhabditis_elegans
ENSGAGG00000008582	SMARCAD1	100	73.938	ENSCJAG00000006778	SMARCAD1	100	73.558	Callithrix_jacchus
ENSGAGG00000008582	SMARCAD1	100	73.988	ENSCAFG00000010026	SMARCAD1	100	73.704	Canis_familiaris
ENSGAGG00000008582	SMARCAD1	85	78.394	ENSCAFG00020003994	SMARCAD1	99	78.394	Canis_lupus_dingo
ENSGAGG00000008582	SMARCAD1	100	73.988	ENSCHIG00000012905	SMARCAD1	100	73.608	Capra_hircus
ENSGAGG00000008582	SMARCAD1	100	74.181	ENSTSYG00000002706	SMARCAD1	100	73.800	Carlito_syrichta
ENSGAGG00000008582	SMARCAD1	90	61.547	ENSCAPG00000016744	SMARCAD1	96	61.514	Cavia_aperea
ENSGAGG00000008582	SMARCAD1	100	73.166	ENSCPOG00000011398	SMARCAD1	100	73.166	Cavia_porcellus
ENSGAGG00000008582	SMARCAD1	100	73.842	ENSCCAG00000022264	SMARCAD1	100	85.092	Cebus_capucinus
ENSGAGG00000008582	SMARCAD1	100	74.035	ENSCATG00000035663	SMARCAD1	99	78.507	Cercocebus_atys
ENSGAGG00000008582	SMARCAD1	81	78.673	ENSCSAG00000004186	SMARCAD1	100	78.673	Chlorocebus_sabaeus
ENSGAGG00000008582	SMARCAD1	100	97.379	ENSCPBG00000013203	SMARCAD1	100	97.433	Chrysemys_picta_bellii
ENSGAGG00000008582	SMARCAD1	64	50.746	ENSCING00000001688	-	99	50.746	Ciona_intestinalis
ENSGAGG00000008582	SMARCAD1	100	73.938	ENSCANG00000003556	SMARCAD1	100	85.260	Colobus_angolensis_palliatus
ENSGAGG00000008582	SMARCAD1	100	72.780	ENSCGRG00001015056	Smarcad1	100	72.596	Cricetulus_griseus_chok1gshd
ENSGAGG00000008582	SMARCAD1	100	72.780	ENSCGRG00000014087	Smarcad1	100	72.596	Cricetulus_griseus_crigri
ENSGAGG00000008582	SMARCAD1	81	61.960	ENSCSEG00000014419	-	91	58.553	Cynoglossus_semilaevis
ENSGAGG00000008582	SMARCAD1	97	62.968	ENSCSEG00000017903	smarcad1a	100	53.254	Cynoglossus_semilaevis
ENSGAGG00000008582	SMARCAD1	84	55.383	ENSDARG00000014041	smarcad1a	91	55.960	Danio_rerio
ENSGAGG00000008582	SMARCAD1	100	73.745	ENSDNOG00000000806	-	100	73.365	Dasypus_novemcinctus
ENSGAGG00000008582	SMARCAD1	100	72.780	ENSDORG00000012331	Smarcad1	100	72.517	Dipodomys_ordii
ENSGAGG00000008582	SMARCAD1	63	45.622	FBgn0032157	Etl1	92	40.073	Drosophila_melanogaster
ENSGAGG00000008582	SMARCAD1	61	45.794	ENSEBUG00000003969	smarcad1a	96	45.867	Eptatretus_burgeri
ENSGAGG00000008582	SMARCAD1	100	73.988	ENSEASG00005012382	SMARCAD1	100	73.704	Equus_asinus_asinus
ENSGAGG00000008582	SMARCAD1	100	73.988	ENSECAG00000011562	SMARCAD1	100	73.704	Equus_caballus
ENSGAGG00000008582	SMARCAD1	79	56.182	ENSELUG00000019154	smarcad1b	93	51.182	Esox_lucius
ENSGAGG00000008582	SMARCAD1	100	51.204	ENSELUG00000018535	smarcad1a	100	50.788	Esox_lucius
ENSGAGG00000008582	SMARCAD1	100	73.674	ENSFCAG00000003958	SMARCAD1	100	85.595	Felis_catus
ENSGAGG00000008582	SMARCAD1	100	76.722	ENSFALG00000006089	SMARCAD1	100	76.916	Ficedula_albicollis
ENSGAGG00000008582	SMARCAD1	100	74.228	ENSFDAG00000017027	SMARCAD1	100	73.558	Fukomys_damarensis
ENSGAGG00000008582	SMARCAD1	65	65.579	ENSFHEG00000012778	smarcad1a	67	62.295	Fundulus_heteroclitus
ENSGAGG00000008582	SMARCAD1	83	58.053	ENSGMOG00000018995	smarcad1a	97	58.295	Gadus_morhua
ENSGAGG00000008582	SMARCAD1	86	75.425	ENSGALG00000037339	SMARCAD1	99	75.425	Gallus_gallus
ENSGAGG00000008582	SMARCAD1	62	66.562	ENSGAFG00000013498	smarcad1a	60	66.562	Gambusia_affinis
ENSGAGG00000008582	SMARCAD1	85	57.449	ENSGACG00000007327	smarcad1a	99	57.627	Gasterosteus_aculeatus
ENSGAGG00000008582	SMARCAD1	100	74.035	ENSGGOG00000023001	SMARCAD1	100	73.654	Gorilla_gorilla
ENSGAGG00000008582	SMARCAD1	67	64.502	ENSHBUG00000011042	smarcad1a	71	61.273	Haplochromis_burtoni
ENSGAGG00000008582	SMARCAD1	100	73.649	ENSHGLG00000005070	SMARCAD1	100	73.154	Heterocephalus_glaber_female
ENSGAGG00000008582	SMARCAD1	100	73.649	ENSHGLG00100006812	SMARCAD1	100	73.154	Heterocephalus_glaber_male
ENSGAGG00000008582	SMARCAD1	76	64.441	ENSHCOG00000007848	smarcad1a	83	64.441	Hippocampus_comes
ENSGAGG00000008582	SMARCAD1	93	51.799	ENSIPUG00000022817	smarcad1b	99	51.992	Ictalurus_punctatus
ENSGAGG00000008582	SMARCAD1	62	65.156	ENSIPUG00000000242	smarcad1a	94	52.665	Ictalurus_punctatus
ENSGAGG00000008582	SMARCAD1	100	73.552	ENSSTOG00000001227	SMARCAD1	100	73.173	Ictidomys_tridecemlineatus
ENSGAGG00000008582	SMARCAD1	100	73.456	ENSJJAG00000022342	Smarcad1	100	73.077	Jaculus_jaculus
ENSGAGG00000008582	SMARCAD1	68	63.675	ENSLBEG00000008088	smarcad1a	99	48.955	Labrus_bergylta
ENSGAGG00000008582	SMARCAD1	100	57.663	ENSLOCG00000012909	smarcad1a	100	58.086	Lepisosteus_oculatus
ENSGAGG00000008582	SMARCAD1	100	72.297	ENSLAFG00000000040	SMARCAD1	100	72.019	Loxodonta_africana
ENSGAGG00000008582	SMARCAD1	100	74.035	ENSMFAG00000042606	SMARCAD1	99	78.507	Macaca_fascicularis
ENSGAGG00000008582	SMARCAD1	85	78.507	ENSMMUG00000022242	SMARCAD1	99	78.507	Macaca_mulatta
ENSGAGG00000008582	SMARCAD1	100	74.131	ENSMNEG00000038117	SMARCAD1	100	85.427	Macaca_nemestrina
ENSGAGG00000008582	SMARCAD1	100	74.035	ENSMLEG00000038333	SMARCAD1	100	85.260	Mandrillus_leucophaeus
ENSGAGG00000008582	SMARCAD1	68	65.616	ENSMAMG00000000933	smarcad1a	91	55.729	Mastacembelus_armatus
ENSGAGG00000008582	SMARCAD1	100	50.319	ENSMZEG00005005203	smarcad1a	91	55.911	Maylandia_zebra
ENSGAGG00000008582	SMARCAD1	93	70.123	ENSMGAG00000005577	SMARCAD1	100	70.123	Meleagris_gallopavo
ENSGAGG00000008582	SMARCAD1	100	72.780	ENSMAUG00000008417	Smarcad1	100	72.500	Mesocricetus_auratus
ENSGAGG00000008582	SMARCAD1	100	73.436	ENSMICG00000009746	SMARCAD1	100	73.634	Microcebus_murinus
ENSGAGG00000008582	SMARCAD1	100	72.394	ENSMOCG00000017142	Smarcad1	100	72.115	Microtus_ochrogaster
ENSGAGG00000008582	SMARCAD1	77	59.348	ENSMMOG00000000275	smarcad1a	98	59.402	Mola_mola
ENSGAGG00000008582	SMARCAD1	100	75.264	ENSMODG00000019268	SMARCAD1	100	75.551	Monodelphis_domestica
ENSGAGG00000008582	SMARCAD1	95	77.150	MGP_CAROLIEiJ_G0028458	-	77	77.150	Mus_caroli
ENSGAGG00000008582	SMARCAD1	100	72.560	ENSMUSG00000029920	Smarcad1	100	72.367	Mus_musculus
ENSGAGG00000008582	SMARCAD1	100	72.850	MGP_PahariEiJ_G0022198	Smarcad1	100	72.657	Mus_pahari
ENSGAGG00000008582	SMARCAD1	100	72.754	MGP_SPRETEiJ_G0029462	Smarcad1	100	72.560	Mus_spretus
ENSGAGG00000008582	SMARCAD1	100	73.796	ENSMPUG00000002111	SMARCAD1	100	73.512	Mustela_putorius_furo
ENSGAGG00000008582	SMARCAD1	100	73.025	ENSMLUG00000000425	SMARCAD1	100	72.841	Myotis_lucifugus
ENSGAGG00000008582	SMARCAD1	100	73.069	ENSNGAG00000000810	Smarcad1	100	72.876	Nannospalax_galili
ENSGAGG00000008582	SMARCAD1	65	64.201	ENSNBRG00000012749	smarcad1a	87	60.923	Neolamprologus_brichardi
ENSGAGG00000008582	SMARCAD1	100	74.035	ENSNLEG00000014225	SMARCAD1	100	85.260	Nomascus_leucogenys
ENSGAGG00000008582	SMARCAD1	100	73.410	ENSODEG00000004334	SMARCAD1	100	73.218	Octodon_degus
ENSGAGG00000008582	SMARCAD1	63	67.588	ENSONIG00000015059	smarcad1a	91	59.040	Oreochromis_niloticus
ENSGAGG00000008582	SMARCAD1	80	82.729	ENSOANG00000013764	SMARCAD1	99	82.729	Ornithorhynchus_anatinus
ENSGAGG00000008582	SMARCAD1	100	73.649	ENSOCUG00000017283	SMARCAD1	100	73.269	Oryctolagus_cuniculus
ENSGAGG00000008582	SMARCAD1	63	66.978	ENSORLG00000004869	smarcad1a	82	54.700	Oryzias_latipes
ENSGAGG00000008582	SMARCAD1	63	66.978	ENSORLG00020020569	smarcad1a	100	48.854	Oryzias_latipes_hni
ENSGAGG00000008582	SMARCAD1	63	66.822	ENSORLG00015009045	smarcad1a	100	49.170	Oryzias_latipes_hsok
ENSGAGG00000008582	SMARCAD1	65	65.465	ENSOMEG00000023032	smarcad1a	64	64.985	Oryzias_melastigma
ENSGAGG00000008582	SMARCAD1	100	72.666	ENSOGAG00000011444	SMARCAD1	100	72.457	Otolemur_garnettii
ENSGAGG00000008582	SMARCAD1	100	73.892	ENSOARG00000017851	SMARCAD1	100	73.512	Ovis_aries
ENSGAGG00000008582	SMARCAD1	100	74.035	ENSPPAG00000035715	SMARCAD1	100	73.654	Pan_paniscus
ENSGAGG00000008582	SMARCAD1	100	73.674	ENSPPRG00000024756	SMARCAD1	100	85.595	Panthera_pardus
ENSGAGG00000008582	SMARCAD1	100	73.532	ENSPTIG00000017868	SMARCAD1	100	73.250	Panthera_tigris_altaica
ENSGAGG00000008582	SMARCAD1	100	74.035	ENSPTRG00000023126	SMARCAD1	100	85.260	Pan_troglodytes
ENSGAGG00000008582	SMARCAD1	100	72.815	ENSPANG00000019757	SMARCAD1	100	72.675	Papio_anubis
ENSGAGG00000008582	SMARCAD1	100	91.884	ENSPSIG00000010255	SMARCAD1	100	92.560	Pelodiscus_sinensis
ENSGAGG00000008582	SMARCAD1	63	65.528	ENSPMGG00000010735	smarcad1a	91	65.528	Periophthalmus_magnuspinnatus
ENSGAGG00000008582	SMARCAD1	100	62.196	ENSPEMG00000001854	Smarcad1	100	61.859	Peromyscus_maniculatus_bairdii
ENSGAGG00000008582	SMARCAD1	99	46.825	ENSPMAG00000003516	smarcad1a	99	46.919	Petromyzon_marinus
ENSGAGG00000008582	SMARCAD1	78	82.811	ENSPCIG00000008137	SMARCAD1	98	84.699	Phascolarctos_cinereus
ENSGAGG00000008582	SMARCAD1	80	61.905	ENSPREG00000018185	smarcad1a	76	66.511	Poecilia_reticulata
ENSGAGG00000008582	SMARCAD1	100	73.603	ENSPPYG00000014935	SMARCAD1	100	73.417	Pongo_abelii
ENSGAGG00000008582	SMARCAD1	86	70.738	ENSPCOG00000020478	SMARCAD1	99	70.738	Propithecus_coquereli
ENSGAGG00000008582	SMARCAD1	100	72.281	ENSPVAG00000001760	SMARCAD1	100	72.483	Pteropus_vampyrus
ENSGAGG00000008582	SMARCAD1	65	63.905	ENSPNYG00000010087	smarcad1a	88	60.651	Pundamilia_nyererei
ENSGAGG00000008582	SMARCAD1	84	56.502	ENSPNAG00000001663	smarcad1a	90	56.502	Pygocentrus_nattereri
ENSGAGG00000008582	SMARCAD1	80	57.023	ENSPNAG00000010099	smarcad1b	99	51.518	Pygocentrus_nattereri
ENSGAGG00000008582	SMARCAD1	100	72.999	ENSRNOG00000006391	Smarcad1	100	72.622	Rattus_norvegicus
ENSGAGG00000008582	SMARCAD1	100	73.938	ENSRBIG00000041989	SMARCAD1	100	73.558	Rhinopithecus_bieti
ENSGAGG00000008582	SMARCAD1	100	73.938	ENSRROG00000035309	SMARCAD1	100	73.558	Rhinopithecus_roxellana
ENSGAGG00000008582	SMARCAD1	100	73.745	ENSSBOG00000032114	SMARCAD1	100	85.092	Saimiri_boliviensis_boliviensis
ENSGAGG00000008582	SMARCAD1	100	75.477	ENSSHAG00000001279	SMARCAD1	100	76.204	Sarcophilus_harrisii
ENSGAGG00000008582	SMARCAD1	100	50.699	ENSSFOG00015016814	smarcad1b	100	50.604	Scleropages_formosus
ENSGAGG00000008582	SMARCAD1	75	58.085	ENSSFOG00015020909	smarcad1a	100	58.085	Scleropages_formosus
ENSGAGG00000008582	SMARCAD1	79	64.841	ENSSMAG00000001326	smarcad1a	84	61.346	Scophthalmus_maximus
ENSGAGG00000008582	SMARCAD1	67	63.793	ENSSDUG00000022338	smarcad1a	88	61.044	Seriola_dumerili
ENSGAGG00000008582	SMARCAD1	67	63.362	ENSSLDG00000024986	smarcad1a	69	60.643	Seriola_lalandi_dorsalis
ENSGAGG00000008582	SMARCAD1	58	90.452	ENSSPUG00000004633	SMARCAD1	100	90.452	Sphenodon_punctatus
ENSGAGG00000008582	SMARCAD1	100	74.085	ENSSSCG00000009193	SMARCAD1	100	78.580	Sus_scrofa
ENSGAGG00000008582	SMARCAD1	76	80.629	ENSTGUG00000003127	SMARCAD1	100	81.132	Taeniopygia_guttata
ENSGAGG00000008582	SMARCAD1	85	57.883	ENSTNIG00000017585	smarcad1a	99	58.043	Tetraodon_nigroviridis
ENSGAGG00000008582	SMARCAD1	90	86.508	ENSTBEG00000002789	SMARCAD1	91	86.508	Tupaia_belangeri
ENSGAGG00000008582	SMARCAD1	97	74.826	ENSTTRG00000000226	SMARCAD1	98	75.657	Tursiops_truncatus
ENSGAGG00000008582	SMARCAD1	100	73.699	ENSUAMG00000022262	SMARCAD1	99	81.806	Ursus_americanus
ENSGAGG00000008582	SMARCAD1	100	73.867	ENSUMAG00000004549	SMARCAD1	100	73.679	Ursus_maritimus
ENSGAGG00000008582	SMARCAD1	93	82.098	ENSVVUG00000007271	SMARCAD1	99	82.098	Vulpes_vulpes
ENSGAGG00000008582	SMARCAD1	84	67.162	ENSXETG00000019214	smarcad1	100	66.933	Xenopus_tropicalis
ENSGAGG00000008582	SMARCAD1	75	59.742	ENSXCOG00000005232	smarcad1a	86	61.836	Xiphophorus_couchianus
ENSGAGG00000008582	SMARCAD1	69	62.132	ENSXMAG00000015350	smarcad1a	63	62.132	Xiphophorus_maculatus