EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000008653 (Gene tree)
Gene ID: -
Gene Symbol: PRPF6
Alias: ANT-1|C20orf14|Prp6|RP60|SNRNP102|TOM|U5-102K|bB152O15.1|hPrp6
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 35179 bases
Position: chrPPEB01000660.1:282406-317584
Accession: 15860
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000011185	PRP1_N	PF06424.12	1.6e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000012808	PRPF6-201	3121	-	ENSGAGP00000011185	977 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000008653's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000008653's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000008653	PRPF6	96	97.131	ENSG00000101161	PRPF6	100	97.131	Homo_sapiens
ENSGAGG00000008653	PRPF6	96	93.085	ENSAPOG00000010395	prpf6	98	92.083	Acanthochromis_polyacanthus
ENSGAGG00000008653	PRPF6	97	96.829	ENSAMEG00000001916	PRPF6	99	96.829	Ailuropoda_melanoleuca
ENSGAGG00000008653	PRPF6	96	92.979	ENSACIG00000019862	prpf6	98	91.875	Amphilophus_citrinellus
ENSGAGG00000008653	PRPF6	96	93.191	ENSAOCG00000012988	prpf6	98	92.188	Amphiprion_ocellaris
ENSGAGG00000008653	PRPF6	96	86.489	ENSAPEG00000008301	prpf6	100	87.021	Amphiprion_percula
ENSGAGG00000008653	PRPF6	96	92.660	ENSATEG00000005581	prpf6	98	91.562	Anabas_testudineus
ENSGAGG00000008653	PRPF6	100	96.255	ENSACAG00000006464	PRPF6	100	96.255	Anolis_carolinensis
ENSGAGG00000008653	PRPF6	96	97.237	ENSANAG00000012661	PRPF6	100	98.115	Aotus_nancymaae
ENSGAGG00000008653	PRPF6	96	92.872	ENSACLG00000025875	prpf6	98	91.771	Astatotilapia_calliptera
ENSGAGG00000008653	PRPF6	97	92.691	ENSAMXG00000001929	prpf6	98	91.892	Astyanax_mexicanus
ENSGAGG00000008653	PRPF6	96	97.768	ENSBTAG00000011656	PRPF6	100	97.768	Bos_taurus
ENSGAGG00000008653	PRPF6	96	97.237	ENSCJAG00000010616	PRPF6	100	97.237	Callithrix_jacchus
ENSGAGG00000008653	PRPF6	96	97.981	ENSCAFG00000013165	PRPF6	100	97.981	Canis_familiaris
ENSGAGG00000008653	PRPF6	96	97.981	ENSCAFG00020002050	PRPF6	100	97.981	Canis_lupus_dingo
ENSGAGG00000008653	PRPF6	96	97.768	ENSCHIG00000018187	PRPF6	100	97.768	Capra_hircus
ENSGAGG00000008653	PRPF6	96	97.875	ENSTSYG00000007814	PRPF6	100	97.875	Carlito_syrichta
ENSGAGG00000008653	PRPF6	94	96.947	ENSCAPG00000015077	PRPF6	100	96.947	Cavia_aperea
ENSGAGG00000008653	PRPF6	96	98.300	ENSCPOG00000007518	PRPF6	100	98.300	Cavia_porcellus
ENSGAGG00000008653	PRPF6	96	93.836	ENSCCAG00000024564	PRPF6	100	93.411	Cebus_capucinus
ENSGAGG00000008653	PRPF6	96	97.237	ENSCATG00000037473	PRPF6	100	97.237	Cercocebus_atys
ENSGAGG00000008653	PRPF6	96	94.474	ENSCLAG00000003854	PRPF6	100	94.474	Chinchilla_lanigera
ENSGAGG00000008653	PRPF6	96	91.975	ENSCSAG00000016742	PRPF6	100	91.552	Chlorocebus_sabaeus
ENSGAGG00000008653	PRPF6	81	81.138	ENSCHOG00000003315	-	100	81.138	Choloepus_hoffmanni
ENSGAGG00000008653	PRPF6	100	99.795	ENSCPBG00000013964	PRPF6	100	99.795	Chrysemys_picta_bellii
ENSGAGG00000008653	PRPF6	97	73.745	ENSCING00000008817	-	99	73.745	Ciona_intestinalis
ENSGAGG00000008653	PRPF6	96	97.024	ENSCANG00000038230	PRPF6	100	97.024	Colobus_angolensis_palliatus
ENSGAGG00000008653	PRPF6	96	98.087	ENSCGRG00001022666	Prpf6	100	98.087	Cricetulus_griseus_chok1gshd
ENSGAGG00000008653	PRPF6	96	87.660	ENSCSEG00000018561	prpf6	100	88.085	Cynoglossus_semilaevis
ENSGAGG00000008653	PRPF6	96	92.872	ENSCVAG00000010550	prpf6	98	91.979	Cyprinodon_variegatus
ENSGAGG00000008653	PRPF6	97	92.616	ENSDARG00000091367	prpf6	99	93.038	Danio_rerio
ENSGAGG00000008653	PRPF6	96	97.450	ENSDNOG00000040544	PRPF6	100	97.450	Dasypus_novemcinctus
ENSGAGG00000008653	PRPF6	88	97.547	ENSDORG00000005406	Prpf6	100	97.547	Dipodomys_ordii
ENSGAGG00000008653	PRPF6	97	71.882	FBgn0036828	CG6841	99	71.882	Drosophila_melanogaster
ENSGAGG00000008653	PRPF6	82	95.614	ENSETEG00000004447	PRPF6	85	95.614	Echinops_telfairi
ENSGAGG00000008653	PRPF6	97	86.702	ENSEBUG00000008835	prpf6	99	87.381	Eptatretus_burgeri
ENSGAGG00000008653	PRPF6	99	96.058	ENSEASG00005023115	PRPF6	100	97.768	Equus_asinus_asinus
ENSGAGG00000008653	PRPF6	96	93.518	ENSECAG00000013983	PRPF6	100	93.518	Equus_caballus
ENSGAGG00000008653	PRPF6	86	100.000	ENSEEUG00000000180	PRPF6	81	100.000	Erinaceus_europaeus
ENSGAGG00000008653	PRPF6	96	91.596	ENSELUG00000001945	prpf6	93	91.596	Esox_lucius
ENSGAGG00000008653	PRPF6	96	98.087	ENSFCAG00000001183	PRPF6	100	98.087	Felis_catus
ENSGAGG00000008653	PRPF6	98	96.594	ENSFALG00000010326	-	100	96.594	Ficedula_albicollis
ENSGAGG00000008653	PRPF6	99	89.278	ENSFALG00000006046	-	99	90.000	Ficedula_albicollis
ENSGAGG00000008653	PRPF6	96	96.812	ENSFDAG00000006451	PRPF6	100	98.186	Fukomys_damarensis
ENSGAGG00000008653	PRPF6	96	93.723	ENSFHEG00000000560	prpf6	98	92.292	Fundulus_heteroclitus
ENSGAGG00000008653	PRPF6	96	89.735	ENSGMOG00000015622	prpf6	99	89.735	Gadus_morhua
ENSGAGG00000008653	PRPF6	96	98.406	ENSGALG00000006001	PRPF6	100	98.406	Gallus_gallus
ENSGAGG00000008653	PRPF6	96	88.404	ENSGAFG00000021109	prpf6	98	87.396	Gambusia_affinis
ENSGAGG00000008653	PRPF6	96	91.809	ENSGACG00000002576	prpf6	99	91.809	Gasterosteus_aculeatus
ENSGAGG00000008653	PRPF6	96	97.131	ENSGGOG00000016876	PRPF6	100	97.131	Gorilla_gorilla
ENSGAGG00000008653	PRPF6	96	92.872	ENSHBUG00000004496	prpf6	98	91.771	Haplochromis_burtoni
ENSGAGG00000008653	PRPF6	96	98.193	ENSHGLG00000009222	PRPF6	100	98.193	Heterocephalus_glaber_female
ENSGAGG00000008653	PRPF6	94	98.146	ENSHGLG00100016600	PRPF6	100	98.146	Heterocephalus_glaber_male
ENSGAGG00000008653	PRPF6	96	91.915	ENSHCOG00000011513	prpf6	98	90.674	Hippocampus_comes
ENSGAGG00000008653	PRPF6	99	91.641	ENSIPUG00000004912	prpf6	98	92.292	Ictalurus_punctatus
ENSGAGG00000008653	PRPF6	96	95.435	ENSSTOG00000002922	PRPF6	100	95.435	Ictidomys_tridecemlineatus
ENSGAGG00000008653	PRPF6	96	98.300	ENSJJAG00000000836	Prpf6	100	98.300	Jaculus_jaculus
ENSGAGG00000008653	PRPF6	96	92.660	ENSKMAG00000017800	prpf6	98	91.667	Kryptolebias_marmoratus
ENSGAGG00000008653	PRPF6	96	92.340	ENSLBEG00000012582	prpf6	98	90.938	Labrus_bergylta
ENSGAGG00000008653	PRPF6	97	94.848	ENSLOCG00000004827	prpf6	98	92.917	Lepisosteus_oculatus
ENSGAGG00000008653	PRPF6	96	97.237	ENSLAFG00000005272	PRPF6	100	97.237	Loxodonta_africana
ENSGAGG00000008653	PRPF6	96	97.024	ENSMFAG00000037542	PRPF6	100	97.024	Macaca_fascicularis
ENSGAGG00000008653	PRPF6	96	90.446	ENSMMUG00000015558	PRPF6	98	99.133	Macaca_mulatta
ENSGAGG00000008653	PRPF6	96	82.627	ENSMNEG00000045555	PRPF6	100	82.203	Macaca_nemestrina
ENSGAGG00000008653	PRPF6	99	90.286	ENSMAMG00000010718	prpf6	98	91.771	Mastacembelus_armatus
ENSGAGG00000008653	PRPF6	90	92.395	ENSMZEG00005026539	prpf6	100	92.849	Maylandia_zebra
ENSGAGG00000008653	PRPF6	96	92.349	ENSMZEG00005015261	-	99	92.774	Maylandia_zebra
ENSGAGG00000008653	PRPF6	94	98.582	ENSMGAG00000006634	PRPF6	100	98.582	Meleagris_gallopavo
ENSGAGG00000008653	PRPF6	96	98.087	ENSMAUG00000013969	Prpf6	100	98.087	Mesocricetus_auratus
ENSGAGG00000008653	PRPF6	84	97.080	ENSMICG00000017793	PRPF6	99	97.080	Microcebus_murinus
ENSGAGG00000008653	PRPF6	96	98.087	ENSMOCG00000001701	Prpf6	100	98.087	Microtus_ochrogaster
ENSGAGG00000008653	PRPF6	96	92.447	ENSMMOG00000020419	prpf6	100	92.872	Mola_mola
ENSGAGG00000008653	PRPF6	95	99.014	ENSMODG00000017051	PRPF6	99	99.014	Monodelphis_domestica
ENSGAGG00000008653	PRPF6	95	93.118	ENSMALG00000000089	prpf6	100	93.118	Monopterus_albus
ENSGAGG00000008653	PRPF6	96	91.498	MGP_CAROLIEiJ_G0024814	Prpf6	100	98.148	Mus_caroli
ENSGAGG00000008653	PRPF6	96	98.087	ENSMUSG00000002455	Prpf6	100	98.148	Mus_musculus
ENSGAGG00000008653	PRPF6	96	98.087	MGP_PahariEiJ_G0026262	Prpf6	100	98.148	Mus_pahari
ENSGAGG00000008653	PRPF6	96	98.087	MGP_SPRETEiJ_G0025741	Prpf6	100	98.148	Mus_spretus
ENSGAGG00000008653	PRPF6	87	98.088	ENSMPUG00000008673	PRPF6	99	98.088	Mustela_putorius_furo
ENSGAGG00000008653	PRPF6	96	98.300	ENSNGAG00000003365	Prpf6	100	98.300	Nannospalax_galili
ENSGAGG00000008653	PRPF6	96	92.979	ENSNBRG00000015025	prpf6	98	91.875	Neolamprologus_brichardi
ENSGAGG00000008653	PRPF6	96	97.024	ENSNLEG00000010208	PRPF6	100	97.024	Nomascus_leucogenys
ENSGAGG00000008653	PRPF6	96	90.119	ENSMEUG00000009824	-	90	90.119	Notamacropus_eugenii
ENSGAGG00000008653	PRPF6	96	92.136	ENSODEG00000004841	PRPF6	100	91.711	Octodon_degus
ENSGAGG00000008653	PRPF6	96	92.872	ENSONIG00000017406	prpf6	98	91.771	Oreochromis_niloticus
ENSGAGG00000008653	PRPF6	96	99.256	ENSOANG00000004920	PRPF6	100	99.256	Ornithorhynchus_anatinus
ENSGAGG00000008653	PRPF6	95	96.245	ENSOCUG00000014151	PRPF6	100	96.245	Oryctolagus_cuniculus
ENSGAGG00000008653	PRPF6	96	92.553	ENSORLG00000009592	prpf6	98	90.956	Oryzias_latipes
ENSGAGG00000008653	PRPF6	96	92.660	ENSORLG00020001458	prpf6	98	91.060	Oryzias_latipes_hni
ENSGAGG00000008653	PRPF6	96	92.660	ENSORLG00015018762	prpf6	98	91.060	Oryzias_latipes_hsok
ENSGAGG00000008653	PRPF6	96	92.447	ENSOMEG00000012174	prpf6	98	91.354	Oryzias_melastigma
ENSGAGG00000008653	PRPF6	96	90.234	ENSOGAG00000007573	PRPF6	100	89.597	Otolemur_garnettii
ENSGAGG00000008653	PRPF6	97	97.143	ENSOARG00000008776	PRPF6	99	97.143	Ovis_aries
ENSGAGG00000008653	PRPF6	96	97.131	ENSPPAG00000008686	PRPF6	100	97.131	Pan_paniscus
ENSGAGG00000008653	PRPF6	96	97.981	ENSPPRG00000008497	PRPF6	100	97.981	Panthera_pardus
ENSGAGG00000008653	PRPF6	94	97.928	ENSPTIG00000011184	PRPF6	97	97.928	Panthera_tigris_altaica
ENSGAGG00000008653	PRPF6	96	97.131	ENSPTRG00000013765	PRPF6	100	97.131	Pan_troglodytes
ENSGAGG00000008653	PRPF6	96	97.024	ENSPANG00000024135	PRPF6	100	97.024	Papio_anubis
ENSGAGG00000008653	PRPF6	98	93.828	ENSPKIG00000005627	prpf6	99	93.828	Paramormyrops_kingsleyae
ENSGAGG00000008653	PRPF6	90	99.660	ENSPSIG00000007717	PRPF6	100	99.660	Pelodiscus_sinensis
ENSGAGG00000008653	PRPF6	99	87.910	ENSPMGG00000008925	prpf6	98	88.970	Periophthalmus_magnuspinnatus
ENSGAGG00000008653	PRPF6	96	97.981	ENSPEMG00000016036	Prpf6	100	97.981	Peromyscus_maniculatus_bairdii
ENSGAGG00000008653	PRPF6	97	87.723	ENSPMAG00000006144	prpf6	99	87.723	Petromyzon_marinus
ENSGAGG00000008653	PRPF6	96	99.150	ENSPCIG00000017909	PRPF6	100	99.150	Phascolarctos_cinereus
ENSGAGG00000008653	PRPF6	96	93.191	ENSPFOG00000006431	prpf6	98	92.083	Poecilia_formosa
ENSGAGG00000008653	PRPF6	96	93.085	ENSPLAG00000005974	prpf6	98	91.979	Poecilia_latipinna
ENSGAGG00000008653	PRPF6	96	93.298	ENSPMEG00000009977	prpf6	98	92.188	Poecilia_mexicana
ENSGAGG00000008653	PRPF6	96	93.191	ENSPREG00000017993	prpf6	94	92.083	Poecilia_reticulata
ENSGAGG00000008653	PRPF6	96	96.599	ENSPPYG00000011256	PRPF6	100	96.599	Pongo_abelii
ENSGAGG00000008653	PRPF6	91	99.510	ENSPCAG00000006536	PRPF6	88	99.510	Procavia_capensis
ENSGAGG00000008653	PRPF6	96	97.131	ENSPCOG00000016881	PRPF6	100	97.131	Propithecus_coquereli
ENSGAGG00000008653	PRPF6	96	91.286	ENSPVAG00000014316	PRPF6	100	90.861	Pteropus_vampyrus
ENSGAGG00000008653	PRPF6	96	76.408	ENSPNYG00000001939	prpf6	98	90.048	Pundamilia_nyererei
ENSGAGG00000008653	PRPF6	97	92.827	ENSPNAG00000015606	prpf6	98	92.612	Pygocentrus_nattereri
ENSGAGG00000008653	PRPF6	96	97.981	ENSRNOG00000051498	Prpf6	100	97.981	Rattus_norvegicus
ENSGAGG00000008653	PRPF6	96	97.024	ENSRBIG00000043613	PRPF6	100	97.024	Rhinopithecus_bieti
ENSGAGG00000008653	PRPF6	96	93.757	ENSRROG00000040969	PRPF6	98	97.751	Rhinopithecus_roxellana
ENSGAGG00000008653	PRPF6	87	93.253	ENSSBOG00000020632	PRPF6	93	93.253	Saimiri_boliviensis_boliviensis
ENSGAGG00000008653	PRPF6	96	99.150	ENSSHAG00000016810	PRPF6	100	99.150	Sarcophilus_harrisii
ENSGAGG00000008653	PRPF6	95	94.946	ENSSFOG00015020859	prpf6	100	94.946	Scleropages_formosus
ENSGAGG00000008653	PRPF6	96	92.128	ENSSMAG00000008112	prpf6	98	90.625	Scophthalmus_maximus
ENSGAGG00000008653	PRPF6	96	92.766	ENSSDUG00000016142	prpf6	98	91.667	Seriola_dumerili
ENSGAGG00000008653	PRPF6	96	92.766	ENSSLDG00000025283	prpf6	100	89.681	Seriola_lalandi_dorsalis
ENSGAGG00000008653	PRPF6	90	97.166	ENSSPUG00000018260	PRPF6	100	97.166	Sphenodon_punctatus
ENSGAGG00000008653	PRPF6	96	92.872	ENSSPAG00000015850	prpf6	98	91.771	Stegastes_partitus
ENSGAGG00000008653	PRPF6	98	96.451	ENSSSCG00000029119	PRPF6	100	97.392	Sus_scrofa
ENSGAGG00000008653	PRPF6	97	98.623	ENSTGUG00000007221	PRPF6	100	98.623	Taeniopygia_guttata
ENSGAGG00000008653	PRPF6	96	92.128	ENSTRUG00000002920	prpf6	98	91.146	Takifugu_rubripes
ENSGAGG00000008653	PRPF6	96	85.820	ENSTNIG00000017873	prpf6	100	86.243	Tetraodon_nigroviridis
ENSGAGG00000008653	PRPF6	85	98.343	ENSTBEG00000005348	PRPF6	85	96.133	Tupaia_belangeri
ENSGAGG00000008653	PRPF6	96	97.343	ENSTTRG00000013068	PRPF6	100	97.343	Tursiops_truncatus
ENSGAGG00000008653	PRPF6	98	92.865	ENSUMAG00000021631	PRPF6	98	96.413	Ursus_maritimus
ENSGAGG00000008653	PRPF6	96	97.981	ENSVVUG00000014948	PRPF6	100	97.981	Vulpes_vulpes
ENSGAGG00000008653	PRPF6	98	96.122	ENSXETG00000012054	prpf6	99	95.535	Xenopus_tropicalis
ENSGAGG00000008653	PRPF6	96	93.298	ENSXCOG00000008082	prpf6	98	92.188	Xiphophorus_couchianus
ENSGAGG00000008653	PRPF6	96	93.298	ENSXMAG00000015581	prpf6	98	92.292	Xiphophorus_maculatus