EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000008773 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 17437 bases
Position: chrPPEB01012175.1:304-17740
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000011385	zf-C2H2	PF00096.26	1.1e-83	1	14
ENSGAGP00000011385	zf-C2H2	PF00096.26	1.1e-83	2	14
ENSGAGP00000011385	zf-C2H2	PF00096.26	1.1e-83	3	14
ENSGAGP00000011385	zf-C2H2	PF00096.26	1.1e-83	4	14
ENSGAGP00000011385	zf-C2H2	PF00096.26	1.1e-83	5	14
ENSGAGP00000011385	zf-C2H2	PF00096.26	1.1e-83	6	14
ENSGAGP00000011385	zf-C2H2	PF00096.26	1.1e-83	7	14
ENSGAGP00000011385	zf-C2H2	PF00096.26	1.1e-83	8	14
ENSGAGP00000011385	zf-C2H2	PF00096.26	1.1e-83	9	14
ENSGAGP00000011385	zf-C2H2	PF00096.26	1.1e-83	10	14
ENSGAGP00000011385	zf-C2H2	PF00096.26	1.1e-83	11	14
ENSGAGP00000011385	zf-C2H2	PF00096.26	1.1e-83	12	14
ENSGAGP00000011385	zf-C2H2	PF00096.26	1.1e-83	13	14
ENSGAGP00000011385	zf-C2H2	PF00096.26	1.1e-83	14	14
ENSGAGP00000011375	zf-C2H2	PF00096.26	2.2e-77	1	12
ENSGAGP00000011375	zf-C2H2	PF00096.26	2.2e-77	2	12
ENSGAGP00000011375	zf-C2H2	PF00096.26	2.2e-77	3	12
ENSGAGP00000011375	zf-C2H2	PF00096.26	2.2e-77	4	12
ENSGAGP00000011375	zf-C2H2	PF00096.26	2.2e-77	5	12
ENSGAGP00000011375	zf-C2H2	PF00096.26	2.2e-77	6	12
ENSGAGP00000011375	zf-C2H2	PF00096.26	2.2e-77	7	12
ENSGAGP00000011375	zf-C2H2	PF00096.26	2.2e-77	8	12
ENSGAGP00000011375	zf-C2H2	PF00096.26	2.2e-77	9	12
ENSGAGP00000011375	zf-C2H2	PF00096.26	2.2e-77	10	12
ENSGAGP00000011375	zf-C2H2	PF00096.26	2.2e-77	11	12
ENSGAGP00000011375	zf-C2H2	PF00096.26	2.2e-77	12	12
ENSGAGP00000011409	zf-C2H2	PF00096.26	6e-65	1	10
ENSGAGP00000011409	zf-C2H2	PF00096.26	6e-65	2	10
ENSGAGP00000011409	zf-C2H2	PF00096.26	6e-65	3	10
ENSGAGP00000011409	zf-C2H2	PF00096.26	6e-65	4	10
ENSGAGP00000011409	zf-C2H2	PF00096.26	6e-65	5	10
ENSGAGP00000011409	zf-C2H2	PF00096.26	6e-65	6	10
ENSGAGP00000011409	zf-C2H2	PF00096.26	6e-65	7	10
ENSGAGP00000011409	zf-C2H2	PF00096.26	6e-65	8	10
ENSGAGP00000011409	zf-C2H2	PF00096.26	6e-65	9	10
ENSGAGP00000011409	zf-C2H2	PF00096.26	6e-65	10	10
ENSGAGP00000011357	zf-C2H2	PF00096.26	8.5e-58	1	9
ENSGAGP00000011357	zf-C2H2	PF00096.26	8.5e-58	2	9
ENSGAGP00000011357	zf-C2H2	PF00096.26	8.5e-58	3	9
ENSGAGP00000011357	zf-C2H2	PF00096.26	8.5e-58	4	9
ENSGAGP00000011357	zf-C2H2	PF00096.26	8.5e-58	5	9
ENSGAGP00000011357	zf-C2H2	PF00096.26	8.5e-58	6	9
ENSGAGP00000011357	zf-C2H2	PF00096.26	8.5e-58	7	9
ENSGAGP00000011357	zf-C2H2	PF00096.26	8.5e-58	8	9
ENSGAGP00000011357	zf-C2H2	PF00096.26	8.5e-58	9	9
ENSGAGP00000011385	zf-met	PF12874.7	4.6e-10	1	1
ENSGAGP00000011375	zf-met	PF12874.7	9.8e-06	1	1
ENSGAGP00000011357	zf-met	PF12874.7	0.00051	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000013034	-	1521	-	ENSGAGP00000011385	506 (aa)	-	-
ENSGAGT00000013022	-	1461	-	ENSGAGP00000011375	486 (aa)	-	-
ENSGAGT00000013002	-	1257	-	ENSGAGP00000011357	418 (aa)	-	-
ENSGAGT00000013060	-	1326	-	ENSGAGP00000011409	441 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000008773's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000008773's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000008773	-	86	54.286	ENSGAGG00000001387	-	69	54.286
ENSGAGG00000008773	-	85	39.409	ENSGAGG00000025218	ZBTB41	59	39.409
ENSGAGG00000008773	-	98	67.014	ENSGAGG00000014356	-	91	70.405
ENSGAGG00000008773	-	98	58.594	ENSGAGG00000001645	-	92	65.472
ENSGAGG00000008773	-	82	65.806	ENSGAGG00000013851	-	81	65.497
ENSGAGG00000008773	-	83	89.412	ENSGAGG00000009739	-	99	89.412
ENSGAGG00000008773	-	83	54.245	ENSGAGG00000011366	-	97	54.688
ENSGAGG00000008773	-	96	60.662	ENSGAGG00000002828	-	91	60.662
ENSGAGG00000008773	-	96	63.564	ENSGAGG00000002214	-	99	65.330
ENSGAGG00000008773	-	98	61.786	ENSGAGG00000009272	-	99	61.364
ENSGAGG00000008773	-	94	56.557	ENSGAGG00000018445	-	85	53.750
ENSGAGG00000008773	-	80	33.523	ENSGAGG00000022082	PRDM15	50	38.144
ENSGAGG00000008773	-	98	63.608	ENSGAGG00000019349	-	99	72.109
ENSGAGG00000008773	-	82	71.895	ENSGAGG00000007230	-	82	71.895
ENSGAGG00000008773	-	81	53.261	ENSGAGG00000004926	-	96	54.301
ENSGAGG00000008773	-	87	65.900	ENSGAGG00000000971	-	91	67.327
ENSGAGG00000008773	-	86	58.871	ENSGAGG00000005805	-	83	60.504
ENSGAGG00000008773	-	98	67.100	ENSGAGG00000006960	-	98	70.763
ENSGAGG00000008773	-	81	46.667	ENSGAGG00000003883	ZNF236	63	46.667
ENSGAGG00000008773	-	100	59.302	ENSGAGG00000010324	-	96	63.571
ENSGAGG00000008773	-	90	38.288	ENSGAGG00000022571	ZNF319	99	39.193
ENSGAGG00000008773	-	89	51.829	ENSGAGG00000017640	-	93	54.225
ENSGAGG00000008773	-	87	63.351	ENSGAGG00000016529	-	94	64.085
ENSGAGG00000008773	-	87	64.773	ENSGAGG00000010492	-	79	64.773
ENSGAGG00000008773	-	85	62.222	ENSGAGG00000006323	-	94	62.921
ENSGAGG00000008773	-	99	68.642	ENSGAGG00000020594	-	99	68.642
ENSGAGG00000008773	-	90	46.218	ENSGAGG00000017094	-	55	46.218
ENSGAGG00000008773	-	98	58.042	ENSGAGG00000002179	-	99	60.965
ENSGAGG00000008773	-	89	34.507	ENSGAGG00000020362	PRDM5	70	35.484
ENSGAGG00000008773	-	93	47.826	ENSGAGG00000021327	GFI1B	69	47.826
ENSGAGG00000008773	-	97	72.109	ENSGAGG00000010833	-	99	71.605
ENSGAGG00000008773	-	94	66.822	ENSGAGG00000004740	-	92	73.171
ENSGAGG00000008773	-	88	71.200	ENSGAGG00000012452	-	93	71.200
ENSGAGG00000008773	-	96	73.091	ENSGAGG00000017986	-	94	71.523
ENSGAGG00000008773	-	83	74.251	ENSGAGG00000006683	-	97	73.054
ENSGAGG00000008773	-	93	61.442	ENSGAGG00000020134	-	96	60.976
ENSGAGG00000008773	-	99	57.426	ENSGAGG00000011487	-	100	59.353
ENSGAGG00000008773	-	91	52.806	ENSGAGG00000006846	-	95	56.020
ENSGAGG00000008773	-	93	57.672	ENSGAGG00000006848	-	66	57.754
ENSGAGG00000008773	-	86	51.485	ENSGAGG00000005331	-	94	51.485
ENSGAGG00000008773	-	84	55.363	ENSGAGG00000020168	-	77	50.980
ENSGAGG00000008773	-	89	53.925	ENSGAGG00000018885	-	77	51.625
ENSGAGG00000008773	-	84	69.202	ENSGAGG00000011574	-	79	69.202
ENSGAGG00000008773	-	81	65.152	ENSGAGG00000001469	-	91	65.152
ENSGAGG00000008773	-	93	72.263	ENSGAGG00000014389	-	95	74.250
ENSGAGG00000008773	-	98	65.667	ENSGAGG00000015451	-	99	65.667
ENSGAGG00000008773	-	87	60.563	ENSGAGG00000015232	-	81	60.563
ENSGAGG00000008773	-	80	54.167	ENSGAGG00000013021	-	98	54.167
ENSGAGG00000008773	-	88	38.667	ENSGAGG00000003095	ZNF865	89	38.667
ENSGAGG00000008773	-	92	56.746	ENSGAGG00000011399	-	96	53.282

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000008773	-	99	54.098	ENSAPLG00000012660	-	97	54.098	Anas_platyrhynchos
ENSGAGG00000008773	-	90	56.318	ENSAMXG00000043978	-	87	56.318	Astyanax_mexicanus
ENSGAGG00000008773	-	86	53.299	ENSAMXG00000019489	-	96	55.556	Astyanax_mexicanus
ENSGAGG00000008773	-	89	63.210	ENSAMXG00000025455	-	98	63.210	Astyanax_mexicanus
ENSGAGG00000008773	-	80	64.458	ENSAMXG00000029878	-	92	64.458	Astyanax_mexicanus
ENSGAGG00000008773	-	82	55.061	ENSAMXG00000037326	-	96	55.731	Astyanax_mexicanus
ENSGAGG00000008773	-	89	58.462	ENSAMXG00000001626	-	94	59.494	Astyanax_mexicanus
ENSGAGG00000008773	-	78	58.033	ENSAMXG00000026144	-	92	58.033	Astyanax_mexicanus
ENSGAGG00000008773	-	90	58.544	ENSAMXG00000026142	-	94	58.544	Astyanax_mexicanus
ENSGAGG00000008773	-	93	53.514	ENSAMXG00000037143	-	95	54.545	Astyanax_mexicanus
ENSGAGG00000008773	-	95	63.404	ENSAMXG00000037703	-	95	61.638	Astyanax_mexicanus
ENSGAGG00000008773	-	82	57.651	ENSAMXG00000003002	-	96	61.000	Astyanax_mexicanus
ENSGAGG00000008773	-	91	59.477	ENSAMXG00000038453	-	97	59.477	Astyanax_mexicanus
ENSGAGG00000008773	-	88	56.845	ENSAMXG00000032619	-	97	57.310	Astyanax_mexicanus
ENSGAGG00000008773	-	84	60.836	ENSAMXG00000031489	-	94	60.836	Astyanax_mexicanus
ENSGAGG00000008773	-	80	62.222	ENSAMXG00000033124	-	55	62.222	Astyanax_mexicanus
ENSGAGG00000008773	-	85	58.702	ENSAMXG00000040212	-	94	58.702	Astyanax_mexicanus
ENSGAGG00000008773	-	87	61.616	ENSAMXG00000035690	-	83	61.616	Astyanax_mexicanus
ENSGAGG00000008773	-	82	62.416	ENSAMXG00000011804	-	95	62.416	Astyanax_mexicanus
ENSGAGG00000008773	-	81	63.455	ENSAMXG00000041725	-	91	63.455	Astyanax_mexicanus
ENSGAGG00000008773	-	81	61.504	ENSAMXG00000004610	-	99	61.504	Astyanax_mexicanus
ENSGAGG00000008773	-	95	57.349	ENSAMXG00000039752	-	95	57.349	Astyanax_mexicanus
ENSGAGG00000008773	-	90	57.534	ENSCPBG00000002014	-	56	57.534	Chrysemys_picta_bellii
ENSGAGG00000008773	-	95	57.647	ENSEASG00005020341	-	99	62.834	Equus_asinus_asinus
ENSGAGG00000008773	-	82	57.641	ENSECAG00000039445	-	94	61.404	Equus_caballus
ENSGAGG00000008773	-	84	62.834	ENSECAG00000017293	-	96	62.834	Equus_caballus
ENSGAGG00000008773	-	97	53.598	ENSIPUG00000015400	-	93	62.150	Ictalurus_punctatus
ENSGAGG00000008773	-	99	58.400	ENSIPUG00000015177	-	73	58.400	Ictalurus_punctatus
ENSGAGG00000008773	-	98	59.547	ENSMPUG00000008437	-	97	62.035	Mustela_putorius_furo
ENSGAGG00000008773	-	99	56.115	ENSPTIG00000009259	-	97	64.322	Panthera_tigris_altaica
ENSGAGG00000008773	-	83	62.241	ENSPSIG00000016247	-	72	57.806	Pelodiscus_sinensis
ENSGAGG00000008773	-	86	62.752	ENSPNAG00000018471	-	90	64.423	Pygocentrus_nattereri
ENSGAGG00000008773	-	92	57.255	ENSPNAG00000021942	-	95	57.255	Pygocentrus_nattereri
ENSGAGG00000008773	-	82	59.664	ENSPNAG00000017479	-	87	59.664	Pygocentrus_nattereri
ENSGAGG00000008773	-	85	62.791	ENSPNAG00000016045	-	79	62.543	Pygocentrus_nattereri
ENSGAGG00000008773	-	82	64.706	ENSPNAG00000018437	-	94	62.500	Pygocentrus_nattereri
ENSGAGG00000008773	-	89	61.864	ENSPNAG00000024704	-	96	61.864	Pygocentrus_nattereri
ENSGAGG00000008773	-	83	57.282	ENSPNAG00000012366	-	94	57.282	Pygocentrus_nattereri
ENSGAGG00000008773	-	90	63.309	ENSPNAG00000012138	-	97	63.309	Pygocentrus_nattereri
ENSGAGG00000008773	-	82	61.084	ENSPNAG00000003919	-	99	61.479	Pygocentrus_nattereri
ENSGAGG00000008773	-	99	56.560	ENSPNAG00000028765	-	87	58.708	Pygocentrus_nattereri
ENSGAGG00000008773	-	93	55.488	ENSPNAG00000029386	-	98	55.591	Pygocentrus_nattereri
ENSGAGG00000008773	-	92	54.762	ENSPNAG00000000783	-	94	56.579	Pygocentrus_nattereri
ENSGAGG00000008773	-	81	59.072	ENSPNAG00000017455	-	85	59.740	Pygocentrus_nattereri
ENSGAGG00000008773	-	82	61.672	ENSPNAG00000008653	-	99	60.976	Pygocentrus_nattereri
ENSGAGG00000008773	-	82	61.224	ENSPNAG00000007072	-	99	61.224	Pygocentrus_nattereri
ENSGAGG00000008773	-	83	64.045	ENSPNAG00000003526	-	82	64.045	Pygocentrus_nattereri
ENSGAGG00000008773	-	92	58.451	ENSPNAG00000002287	-	98	57.812	Pygocentrus_nattereri
ENSGAGG00000008773	-	89	63.333	ENSPNAG00000016025	-	95	63.333	Pygocentrus_nattereri
ENSGAGG00000008773	-	96	58.647	ENSPNAG00000005914	-	94	57.093	Pygocentrus_nattereri
ENSGAGG00000008773	-	84	63.000	ENSUAMG00000027415	-	89	63.000	Ursus_americanus
ENSGAGG00000008773	-	98	60.969	ENSUAMG00000027384	-	99	60.904	Ursus_americanus
ENSGAGG00000008773	-	86	62.824	ENSVPAG00000002698	-	99	62.824	Vicugna_pacos