EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000008873 (Gene tree)
Gene ID: -
Gene Symbol: RBM28
Alias: FLJ10377
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 18216 bases
Position: chrPPEB01012217.1:3237-21452
Accession: 21863
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000011541	RRM_1	PF00076.22	7.1e-48	1	3
ENSGAGP00000011541	RRM_1	PF00076.22	7.1e-48	2	3
ENSGAGP00000011541	RRM_1	PF00076.22	7.1e-48	3	3
ENSGAGP00000011542	RRM_1	PF00076.22	5.5e-46	1	3
ENSGAGP00000011542	RRM_1	PF00076.22	5.5e-46	2	3
ENSGAGP00000011542	RRM_1	PF00076.22	5.5e-46	3	3
ENSGAGP00000011545	RRM_1	PF00076.22	1.2e-45	1	3
ENSGAGP00000011545	RRM_1	PF00076.22	1.2e-45	2	3
ENSGAGP00000011545	RRM_1	PF00076.22	1.2e-45	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000013215	RBM28-201	2070	-	ENSGAGP00000011541	689 (aa)	-	-
ENSGAGT00000013216	RBM28-202	1842	-	ENSGAGP00000011542	613 (aa)	-	-
ENSGAGT00000013220	RBM28-203	1785	-	ENSGAGP00000011545	594 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000008873's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000008873's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000008873	RBM28	80	79.670	ENSG00000106344	RBM28	100	57.353	Homo_sapiens
ENSGAGG00000008873	RBM28	89	60.526	ENSAPOG00000015512	rbm28	82	55.882	Acanthochromis_polyacanthus
ENSGAGG00000008873	RBM28	89	79.670	ENSAMEG00000004776	RBM28	74	79.570	Ailuropoda_melanoleuca
ENSGAGG00000008873	RBM28	60	43.980	ENSACIG00000023153	rbm28	91	45.232	Amphilophus_citrinellus
ENSGAGG00000008873	RBM28	83	65.116	ENSAOCG00000000462	rbm28	85	53.125	Amphiprion_ocellaris
ENSGAGG00000008873	RBM28	89	60.526	ENSAPEG00000012996	rbm28	85	53.125	Amphiprion_percula
ENSGAGG00000008873	RBM28	89	61.579	ENSATEG00000001672	rbm28	84	58.883	Anabas_testudineus
ENSGAGG00000008873	RBM28	80	79.670	ENSANAG00000033922	RBM28	82	72.500	Aotus_nancymaae
ENSGAGG00000008873	RBM28	83	63.102	ENSACLG00000025024	rbm28	77	63.102	Astatotilapia_calliptera
ENSGAGG00000008873	RBM28	51	66.310	ENSAMXG00000000763	rbm28	95	47.585	Astyanax_mexicanus
ENSGAGG00000008873	RBM28	93	80.220	ENSBTAG00000017001	RBM28	83	69.712	Bos_taurus
ENSGAGG00000008873	RBM28	85	80.220	ENSCJAG00000017731	RBM28	82	71.500	Callithrix_jacchus
ENSGAGG00000008873	RBM28	93	79.121	ENSCAFG00000001667	RBM28	76	79.121	Canis_familiaris
ENSGAGG00000008873	RBM28	93	79.121	ENSCAFG00020021648	RBM28	76	79.121	Canis_lupus_dingo
ENSGAGG00000008873	RBM28	93	80.769	ENSCHIG00000014146	RBM28	68	80.769	Capra_hircus
ENSGAGG00000008873	RBM28	86	74.490	ENSTSYG00000002892	RBM28	82	74.490	Carlito_syrichta
ENSGAGG00000008873	RBM28	60	84.932	ENSCAPG00000013218	RBM28	63	74.783	Cavia_aperea
ENSGAGG00000008873	RBM28	86	80.220	ENSCPOG00000006253	RBM28	71	80.220	Cavia_porcellus
ENSGAGG00000008873	RBM28	80	80.220	ENSCCAG00000035105	RBM28	82	72.000	Cebus_capucinus
ENSGAGG00000008873	RBM28	80	79.121	ENSCATG00000040497	RBM28	84	64.035	Cercocebus_atys
ENSGAGG00000008873	RBM28	86	80.220	ENSCLAG00000003707	RBM28	70	80.220	Chinchilla_lanigera
ENSGAGG00000008873	RBM28	85	79.121	ENSCSAG00000010161	RBM28	71	79.121	Chlorocebus_sabaeus
ENSGAGG00000008873	RBM28	59	63.710	ENSCHOG00000001994	-	63	62.097	Choloepus_hoffmanni
ENSGAGG00000008873	RBM28	82	62.921	ENSCING00000009238	-	63	58.974	Ciona_intestinalis
ENSGAGG00000008873	RBM28	89	66.222	ENSCANG00000038397	RBM28	76	79.121	Colobus_angolensis_palliatus
ENSGAGG00000008873	RBM28	88	71.707	ENSCGRG00001021278	Rbm28	80	71.707	Cricetulus_griseus_chok1gshd
ENSGAGG00000008873	RBM28	88	71.707	ENSCGRG00000005098	Rbm28	82	71.707	Cricetulus_griseus_crigri
ENSGAGG00000008873	RBM28	88	56.098	ENSCSEG00000004212	rbm28	84	56.098	Cynoglossus_semilaevis
ENSGAGG00000008873	RBM28	98	62.032	ENSCVAG00000010493	rbm28	72	62.032	Cyprinodon_variegatus
ENSGAGG00000008873	RBM28	91	59.474	ENSDARG00000025332	rbm28	74	62.088	Danio_rerio
ENSGAGG00000008873	RBM28	89	79.670	ENSDNOG00000001124	RBM28	74	79.670	Dasypus_novemcinctus
ENSGAGG00000008873	RBM28	60	78.022	ENSDORG00000004184	Rbm28	75	78.022	Dipodomys_ordii
ENSGAGG00000008873	RBM28	56	33.247	FBgn0260456	CG4806	57	32.558	Drosophila_melanogaster
ENSGAGG00000008873	RBM28	87	69.608	ENSETEG00000007130	RBM28	83	68.599	Echinops_telfairi
ENSGAGG00000008873	RBM28	95	41.597	ENSEBUG00000004419	rbm28	98	37.803	Eptatretus_burgeri
ENSGAGG00000008873	RBM28	82	80.769	ENSEASG00005008528	RBM28	81	71.144	Equus_asinus_asinus
ENSGAGG00000008873	RBM28	85	80.220	ENSECAG00000007745	RBM28	81	72.139	Equus_caballus
ENSGAGG00000008873	RBM28	75	76.531	ENSEEUG00000002389	RBM28	77	66.986	Erinaceus_europaeus
ENSGAGG00000008873	RBM28	88	65.803	ENSELUG00000020602	rbm28	83	61.500	Esox_lucius
ENSGAGG00000008873	RBM28	93	79.121	ENSFCAG00000000946	RBM28	77	79.121	Felis_catus
ENSGAGG00000008873	RBM28	89	79.121	ENSFDAG00000010169	RBM28	83	71.000	Fukomys_damarensis
ENSGAGG00000008873	RBM28	86	52.850	ENSGMOG00000007091	rbm28	99	41.867	Gadus_morhua
ENSGAGG00000008873	RBM28	52	62.567	ENSGAFG00000004802	rbm28	93	45.080	Gambusia_affinis
ENSGAGG00000008873	RBM28	89	57.754	ENSGACG00000012612	rbm28	84	56.853	Gasterosteus_aculeatus
ENSGAGG00000008873	RBM28	81	73.913	ENSGGOG00000004644	RBM28	79	72.561	Gorilla_gorilla
ENSGAGG00000008873	RBM28	71	63.102	ENSHBUG00000009611	rbm28	68	63.102	Haplochromis_burtoni
ENSGAGG00000008873	RBM28	87	78.022	ENSHGLG00000005409	RBM28	83	72.500	Heterocephalus_glaber_female
ENSGAGG00000008873	RBM28	85	78.022	ENSHGLG00100016458	RBM28	83	72.500	Heterocephalus_glaber_male
ENSGAGG00000008873	RBM28	73	56.044	ENSHCOG00000010597	rbm28	63	69.231	Hippocampus_comes
ENSGAGG00000008873	RBM28	58	38.072	ENSIPUG00000007103	rbm28	81	36.790	Ictalurus_punctatus
ENSGAGG00000008873	RBM28	89	79.670	ENSSTOG00000002169	RBM28	76	79.670	Ictidomys_tridecemlineatus
ENSGAGG00000008873	RBM28	81	78.453	ENSJJAG00000022400	Rbm28	85	69.613	Jaculus_jaculus
ENSGAGG00000008873	RBM28	83	63.566	ENSKMAG00000013348	rbm28	99	40.633	Kryptolebias_marmoratus
ENSGAGG00000008873	RBM28	76	65.116	ENSLBEG00000012998	rbm28	81	53.398	Labrus_bergylta
ENSGAGG00000008873	RBM28	55	78.295	ENSLACG00000010485	-	85	55.346	Latimeria_chalumnae
ENSGAGG00000008873	RBM28	85	59.794	ENSLOCG00000015541	rbm28	74	59.794	Lepisosteus_oculatus
ENSGAGG00000008873	RBM28	100	54.502	ENSLAFG00000010717	RBM28	83	67.150	Loxodonta_africana
ENSGAGG00000008873	RBM28	80	79.121	ENSMFAG00000031036	RBM28	84	64.474	Macaca_fascicularis
ENSGAGG00000008873	RBM28	80	79.121	ENSMMUG00000007250	RBM28	84	64.474	Macaca_mulatta
ENSGAGG00000008873	RBM28	80	79.121	ENSMNEG00000036970	RBM28	85	65.778	Macaca_nemestrina
ENSGAGG00000008873	RBM28	89	65.333	ENSMLEG00000037717	RBM28	81	78.295	Mandrillus_leucophaeus
ENSGAGG00000008873	RBM28	87	59.500	ENSMAMG00000008525	rbm28	70	63.636	Mastacembelus_armatus
ENSGAGG00000008873	RBM28	74	62.105	ENSMZEG00005019625	rbm28	74	63.102	Maylandia_zebra
ENSGAGG00000008873	RBM28	90	64.384	ENSMAUG00000002263	Rbm28	81	68.037	Mesocricetus_auratus
ENSGAGG00000008873	RBM28	80	79.670	ENSMICG00000000107	RBM28	72	79.670	Microcebus_murinus
ENSGAGG00000008873	RBM28	89	79.121	ENSMOCG00000014615	Rbm28	83	70.352	Microtus_ochrogaster
ENSGAGG00000008873	RBM28	60	45.361	ENSMMOG00000008600	rbm28	86	44.588	Mola_mola
ENSGAGG00000008873	RBM28	87	71.220	ENSMODG00000015151	RBM28	66	75.824	Monodelphis_domestica
ENSGAGG00000008873	RBM28	85	61.497	ENSMALG00000006419	rbm28	77	61.497	Monopterus_albus
ENSGAGG00000008873	RBM28	85	78.571	MGP_CAROLIEiJ_G0028162	Rbm28	100	52.116	Mus_caroli
ENSGAGG00000008873	RBM28	85	78.571	ENSMUSG00000029701	Rbm28	100	52.653	Mus_musculus
ENSGAGG00000008873	RBM28	80	78.571	MGP_PahariEiJ_G0021920	Rbm28	100	51.651	Mus_pahari
ENSGAGG00000008873	RBM28	89	78.022	MGP_SPRETEiJ_G0029162	Rbm28	76	78.022	Mus_spretus
ENSGAGG00000008873	RBM28	89	79.121	ENSMPUG00000006511	RBM28	82	70.647	Mustela_putorius_furo
ENSGAGG00000008873	RBM28	93	80.220	ENSMLUG00000002186	RBM28	78	80.220	Myotis_lucifugus
ENSGAGG00000008873	RBM28	87	76.923	ENSNGAG00000006480	-	84	71.859	Nannospalax_galili
ENSGAGG00000008873	RBM28	87	69.347	ENSNGAG00000017946	-	79	74.176	Nannospalax_galili
ENSGAGG00000008873	RBM28	80	80.220	ENSNLEG00000012307	RBM28	82	70.732	Nomascus_leucogenys
ENSGAGG00000008873	RBM28	81	75.155	ENSMEUG00000009611	RBM28	81	72.671	Notamacropus_eugenii
ENSGAGG00000008873	RBM28	77	79.121	ENSOPRG00000015140	RBM28	64	79.121	Ochotona_princeps
ENSGAGG00000008873	RBM28	73	79.670	ENSODEG00000013217	-	71	79.670	Octodon_degus
ENSGAGG00000008873	RBM28	87	65.500	ENSODEG00000003213	-	82	66.500	Octodon_degus
ENSGAGG00000008873	RBM28	83	62.632	ENSONIG00000014924	rbm28	75	63.636	Oreochromis_niloticus
ENSGAGG00000008873	RBM28	85	74.051	ENSOANG00000000815	-	100	50.196	Ornithorhynchus_anatinus
ENSGAGG00000008873	RBM28	87	80.769	ENSOCUG00000003009	RBM28	81	71.569	Oryctolagus_cuniculus
ENSGAGG00000008873	RBM28	87	60.104	ENSORLG00000009636	rbm28	82	56.122	Oryzias_latipes
ENSGAGG00000008873	RBM28	87	60.104	ENSORLG00020002123	rbm28	83	56.633	Oryzias_latipes_hni
ENSGAGG00000008873	RBM28	86	56.281	ENSORLG00015015030	rbm28	93	56.281	Oryzias_latipes_hsok
ENSGAGG00000008873	RBM28	81	64.706	ENSOMEG00000007801	rbm28	83	55.102	Oryzias_melastigma
ENSGAGG00000008873	RBM28	58	78.022	ENSOGAG00000006011	RBM28	74	67.500	Otolemur_garnettii
ENSGAGG00000008873	RBM28	83	80.769	ENSOARG00000002547	RBM28	68	80.769	Ovis_aries
ENSGAGG00000008873	RBM28	80	79.670	ENSPPAG00000041730	RBM28	81	70.443	Pan_paniscus
ENSGAGG00000008873	RBM28	93	79.121	ENSPPRG00000004420	RBM28	77	79.121	Panthera_pardus
ENSGAGG00000008873	RBM28	93	79.121	ENSPTIG00000008550	RBM28	77	79.121	Panthera_tigris_altaica
ENSGAGG00000008873	RBM28	80	79.670	ENSPTRG00000019659	RBM28	81	70.443	Pan_troglodytes
ENSGAGG00000008873	RBM28	80	79.121	ENSPANG00000022295	RBM28	84	64.474	Papio_anubis
ENSGAGG00000008873	RBM28	73	69.231	ENSPKIG00000023453	rbm28	65	67.760	Paramormyrops_kingsleyae
ENSGAGG00000008873	RBM28	100	44.308	ENSPMGG00000012840	rbm28	100	45.014	Periophthalmus_magnuspinnatus
ENSGAGG00000008873	RBM28	85	78.571	ENSPEMG00000020673	Rbm28	78	78.571	Peromyscus_maniculatus_bairdii
ENSGAGG00000008873	RBM28	87	71.498	ENSPCIG00000012810	RBM28	84	71.014	Phascolarctos_cinereus
ENSGAGG00000008873	RBM28	87	58.173	ENSPFOG00000018209	rbm28	66	63.187	Poecilia_formosa
ENSGAGG00000008873	RBM28	86	58.173	ENSPLAG00000016078	rbm28	78	53.266	Poecilia_latipinna
ENSGAGG00000008873	RBM28	88	58.173	ENSPMEG00000004292	rbm28	82	52.764	Poecilia_mexicana
ENSGAGG00000008873	RBM28	89	58.173	ENSPREG00000014287	rbm28	71	63.187	Poecilia_reticulata
ENSGAGG00000008873	RBM28	85	79.670	ENSPPYG00000017975	RBM28	82	70.443	Pongo_abelii
ENSGAGG00000008873	RBM28	62	63.636	ENSPCAG00000008223	RBM28	74	53.922	Procavia_capensis
ENSGAGG00000008873	RBM28	89	79.121	ENSPCOG00000016797	RBM28	76	79.121	Propithecus_coquereli
ENSGAGG00000008873	RBM28	82	80.220	ENSPVAG00000005443	RBM28	68	80.220	Pteropus_vampyrus
ENSGAGG00000008873	RBM28	83	62.105	ENSPNYG00000014003	rbm28	76	63.102	Pundamilia_nyererei
ENSGAGG00000008873	RBM28	80	79.121	ENSRNOG00000005468	Rbm28	82	69.849	Rattus_norvegicus
ENSGAGG00000008873	RBM28	80	79.121	ENSRBIG00000033990	RBM28	81	69.458	Rhinopithecus_bieti
ENSGAGG00000008873	RBM28	80	78.571	ENSRROG00000040747	RBM28	81	69.458	Rhinopithecus_roxellana
ENSGAGG00000008873	RBM28	77	83.784	ENSSBOG00000012308	RBM28	78	83.784	Saimiri_boliviensis_boliviensis
ENSGAGG00000008873	RBM28	76	74.176	ENSSHAG00000017017	RBM28	82	67.582	Sarcophilus_harrisii
ENSGAGG00000008873	RBM28	86	58.824	ENSSFOG00015001231	rbm28	99	46.853	Scleropages_formosus
ENSGAGG00000008873	RBM28	60	41.584	ENSSMAG00000003885	rbm28	85	40.865	Scophthalmus_maximus
ENSGAGG00000008873	RBM28	60	63.636	ENSSDUG00000014270	rbm28	73	63.636	Seriola_dumerili
ENSGAGG00000008873	RBM28	89	62.567	ENSSLDG00000020099	rbm28	82	57.214	Seriola_lalandi_dorsalis
ENSGAGG00000008873	RBM28	78	80.220	ENSSARG00000008303	RBM28	72	80.220	Sorex_araneus
ENSGAGG00000008873	RBM28	72	76.471	ENSSPUG00000000838	RBM28	73	76.471	Sphenodon_punctatus
ENSGAGG00000008873	RBM28	80	56.410	ENSSPAG00000023305	rbm28	81	55.280	Stegastes_partitus
ENSGAGG00000008873	RBM28	91	80.769	ENSSSCG00000031847	RBM28	79	80.769	Sus_scrofa
ENSGAGG00000008873	RBM28	84	65.116	ENSTRUG00000013311	rbm28	82	52.133	Takifugu_rubripes
ENSGAGG00000008873	RBM28	74	67.442	ENSTNIG00000017962	rbm28	84	53.398	Tetraodon_nigroviridis
ENSGAGG00000008873	RBM28	76	76.389	ENSTBEG00000012749	RBM28	63	76.389	Tupaia_belangeri
ENSGAGG00000008873	RBM28	83	80.769	ENSTTRG00000013647	RBM28	69	80.769	Tursiops_truncatus
ENSGAGG00000008873	RBM28	93	64.324	ENSUAMG00000006949	RBM28	82	70.352	Ursus_americanus
ENSGAGG00000008873	RBM28	93	79.121	ENSUMAG00000005997	RBM28	76	79.121	Ursus_maritimus
ENSGAGG00000008873	RBM28	71	83.908	ENSVPAG00000008304	RBM28	85	44.393	Vicugna_pacos
ENSGAGG00000008873	RBM28	93	78.571	ENSVVUG00000007270	RBM28	84	69.856	Vulpes_vulpes
ENSGAGG00000008873	RBM28	88	64.251	ENSXETG00000009271	rbm28	84	61.261	Xenopus_tropicalis
ENSGAGG00000008873	RBM28	52	56.150	ENSXCOG00000020357	rbm28	88	42.009	Xiphophorus_couchianus
ENSGAGG00000008873	RBM28	82	62.567	ENSXMAG00000004415	rbm28	82	53.769	Xiphophorus_maculatus