EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000009012 (Gene tree)
Gene ID: -
Gene Symbol: TRANK1
Alias: KIAA0342|LBA1
Full Name: tetratricopeptide repeat and ankyrin repeat containing 1
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 54845 bases
Position: chrPPEB01009042.1:5687-60531
Accession: 29011
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000011663	UvrD-helicase	PF00580.21	7.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000013363	TRANK1-201	8367	-	ENSGAGP00000011663	2695 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000009012's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000009012's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000009012	TRANK1	93	66.720	ENSAPLG00000010356	TRANK1	99	66.774	Anas_platyrhynchos
ENSGAGG00000009012	TRANK1	50	65.291	ENSCAFG00020001387	TRANK1	81	65.683	Canis_lupus_dingo
ENSGAGG00000009012	TRANK1	99	62.726	ENSTSYG00000025860	TRANK1	90	62.820	Carlito_syrichta
ENSGAGG00000009012	TRANK1	100	62.288	ENSCLAG00000003643	TRANK1	90	62.491	Chinchilla_lanigera
ENSGAGG00000009012	TRANK1	99	95.492	ENSCPBG00000013529	TRANK1	90	95.715	Chrysemys_picta_bellii
ENSGAGG00000009012	TRANK1	100	63.348	ENSCANG00000039915	TRANK1	91	63.370	Colobus_angolensis_palliatus
ENSGAGG00000009012	TRANK1	97	63.058	ENSDNOG00000003573	TRANK1	89	63.134	Dasypus_novemcinctus
ENSGAGG00000009012	TRANK1	100	63.413	ENSEASG00005007374	TRANK1	88	66.853	Equus_asinus_asinus
ENSGAGG00000009012	TRANK1	100	63.853	ENSECAG00000018264	TRANK1	89	63.988	Equus_caballus
ENSGAGG00000009012	TRANK1	90	61.981	ENSEEUG00000008528	TRANK1	99	62.002	Erinaceus_europaeus
ENSGAGG00000009012	TRANK1	99	65.864	ENSFALG00000002875	TRANK1	90	65.885	Ficedula_albicollis
ENSGAGG00000009012	TRANK1	71	71.322	ENSGALG00000037629	TRANK1	85	71.322	Gallus_gallus
ENSGAGG00000009012	TRANK1	99	49.025	ENSLOCG00000004808	TRANK1	90	48.830	Lepisosteus_oculatus
ENSGAGG00000009012	TRANK1	99	67.705	ENSMGAG00000011934	TRANK1	91	67.722	Meleagris_gallopavo
ENSGAGG00000009012	TRANK1	100	63.475	ENSMLUG00000003537	TRANK1	91	63.569	Myotis_lucifugus
ENSGAGG00000009012	TRANK1	100	62.316	ENSODEG00000003882	TRANK1	88	62.648	Octodon_degus
ENSGAGG00000009012	TRANK1	99	87.802	ENSPSIG00000010217	TRANK1	90	87.951	Pelodiscus_sinensis
ENSGAGG00000009012	TRANK1	72	64.716	ENSPCAG00000002172	-	87	64.911	Procavia_capensis
ENSGAGG00000009012	TRANK1	89	60.656	ENSPVAG00000004199	TRANK1	99	60.857	Pteropus_vampyrus
ENSGAGG00000009012	TRANK1	100	63.311	ENSRBIG00000012281	TRANK1	91	63.333	Rhinopithecus_bieti
ENSGAGG00000009012	TRANK1	100	63.348	ENSRROG00000044487	TRANK1	91	63.370	Rhinopithecus_roxellana
ENSGAGG00000009012	TRANK1	66	67.105	ENSSARG00000007861	-	74	67.105	Sorex_araneus
ENSGAGG00000009012	TRANK1	80	78.746	ENSSPUG00000015974	TRANK1	95	83.375	Sphenodon_punctatus
ENSGAGG00000009012	TRANK1	92	66.815	ENSTGUG00000005694	TRANK1	100	66.815	Taeniopygia_guttata
ENSGAGG00000009012	TRANK1	50	66.153	ENSUAMG00000027609	-	82	66.618	Ursus_americanus
ENSGAGG00000009012	TRANK1	50	66.152	ENSUMAG00000006416	TRANK1	82	66.617	Ursus_maritimus
ENSGAGG00000009012	TRANK1	50	64.270	ENSVVUG00000007788	TRANK1	81	64.723	Vulpes_vulpes