EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000009243 (Gene tree)
Gene ID: -
Gene Symbol: SRRM1
Alias: MGC39488|POP101|SRM160
Full Name: serine and arginine repetitive matrix 1
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 34846 bases
Position: chrPPEB01003977.1:110356-145201
Accession: 16638
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000012003	PWI	PF01480.17	7.3e-30	1	1
ENSGAGP00000012000	PWI	PF01480.17	7.4e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000013742	SRRM1-201	3185	-	ENSGAGP00000012000	907 (aa)	-	-
ENSGAGT00000013745	SRRM1-202	3143	-	ENSGAGP00000012003	893 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000009243's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000009243's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000009243	SRRM1	59	83.210	ENSACAG00000017848	SRRM1	59	80.627	Anolis_carolinensis
ENSGAGG00000009243	SRRM1	100	98.015	ENSCPBG00000025083	SRRM1	100	98.015	Chrysemys_picta_bellii
ENSGAGG00000009243	SRRM1	51	100.000	ENSEEUG00000013830	SRRM1	82	83.333	Erinaceus_europaeus
ENSGAGG00000009243	SRRM1	59	83.971	ENSSPUG00000015890	SRRM1	58	87.796	Sphenodon_punctatus