EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000009272 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 26588 bases
Position: chrPPEB01003783.1:50276-76863
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000012039	zf-C2H2	PF00096.26	1e-122	1	19
ENSGAGP00000012039	zf-C2H2	PF00096.26	1e-122	2	19
ENSGAGP00000012039	zf-C2H2	PF00096.26	1e-122	3	19
ENSGAGP00000012039	zf-C2H2	PF00096.26	1e-122	4	19
ENSGAGP00000012039	zf-C2H2	PF00096.26	1e-122	5	19
ENSGAGP00000012039	zf-C2H2	PF00096.26	1e-122	6	19
ENSGAGP00000012039	zf-C2H2	PF00096.26	1e-122	7	19
ENSGAGP00000012039	zf-C2H2	PF00096.26	1e-122	8	19
ENSGAGP00000012039	zf-C2H2	PF00096.26	1e-122	9	19
ENSGAGP00000012039	zf-C2H2	PF00096.26	1e-122	10	19
ENSGAGP00000012039	zf-C2H2	PF00096.26	1e-122	11	19
ENSGAGP00000012039	zf-C2H2	PF00096.26	1e-122	12	19
ENSGAGP00000012039	zf-C2H2	PF00096.26	1e-122	13	19
ENSGAGP00000012039	zf-C2H2	PF00096.26	1e-122	14	19
ENSGAGP00000012039	zf-C2H2	PF00096.26	1e-122	15	19
ENSGAGP00000012039	zf-C2H2	PF00096.26	1e-122	16	19
ENSGAGP00000012039	zf-C2H2	PF00096.26	1e-122	17	19
ENSGAGP00000012039	zf-C2H2	PF00096.26	1e-122	18	19
ENSGAGP00000012039	zf-C2H2	PF00096.26	1e-122	19	19
ENSGAGP00000012193	zf-C2H2	PF00096.26	4e-93	1	14
ENSGAGP00000012193	zf-C2H2	PF00096.26	4e-93	2	14
ENSGAGP00000012193	zf-C2H2	PF00096.26	4e-93	3	14
ENSGAGP00000012193	zf-C2H2	PF00096.26	4e-93	4	14
ENSGAGP00000012193	zf-C2H2	PF00096.26	4e-93	5	14
ENSGAGP00000012193	zf-C2H2	PF00096.26	4e-93	6	14
ENSGAGP00000012193	zf-C2H2	PF00096.26	4e-93	7	14
ENSGAGP00000012193	zf-C2H2	PF00096.26	4e-93	8	14
ENSGAGP00000012193	zf-C2H2	PF00096.26	4e-93	9	14
ENSGAGP00000012193	zf-C2H2	PF00096.26	4e-93	10	14
ENSGAGP00000012193	zf-C2H2	PF00096.26	4e-93	11	14
ENSGAGP00000012193	zf-C2H2	PF00096.26	4e-93	12	14
ENSGAGP00000012193	zf-C2H2	PF00096.26	4e-93	13	14
ENSGAGP00000012193	zf-C2H2	PF00096.26	4e-93	14	14
ENSGAGP00000012128	zf-C2H2	PF00096.26	1.7e-86	1	13
ENSGAGP00000012128	zf-C2H2	PF00096.26	1.7e-86	2	13
ENSGAGP00000012128	zf-C2H2	PF00096.26	1.7e-86	3	13
ENSGAGP00000012128	zf-C2H2	PF00096.26	1.7e-86	4	13
ENSGAGP00000012128	zf-C2H2	PF00096.26	1.7e-86	5	13
ENSGAGP00000012128	zf-C2H2	PF00096.26	1.7e-86	6	13
ENSGAGP00000012128	zf-C2H2	PF00096.26	1.7e-86	7	13
ENSGAGP00000012128	zf-C2H2	PF00096.26	1.7e-86	8	13
ENSGAGP00000012128	zf-C2H2	PF00096.26	1.7e-86	9	13
ENSGAGP00000012128	zf-C2H2	PF00096.26	1.7e-86	10	13
ENSGAGP00000012128	zf-C2H2	PF00096.26	1.7e-86	11	13
ENSGAGP00000012128	zf-C2H2	PF00096.26	1.7e-86	12	13
ENSGAGP00000012128	zf-C2H2	PF00096.26	1.7e-86	13	13
ENSGAGP00000012064	zf-C2H2	PF00096.26	8.4e-74	1	11
ENSGAGP00000012064	zf-C2H2	PF00096.26	8.4e-74	2	11
ENSGAGP00000012064	zf-C2H2	PF00096.26	8.4e-74	3	11
ENSGAGP00000012064	zf-C2H2	PF00096.26	8.4e-74	4	11
ENSGAGP00000012064	zf-C2H2	PF00096.26	8.4e-74	5	11
ENSGAGP00000012064	zf-C2H2	PF00096.26	8.4e-74	6	11
ENSGAGP00000012064	zf-C2H2	PF00096.26	8.4e-74	7	11
ENSGAGP00000012064	zf-C2H2	PF00096.26	8.4e-74	8	11
ENSGAGP00000012064	zf-C2H2	PF00096.26	8.4e-74	9	11
ENSGAGP00000012064	zf-C2H2	PF00096.26	8.4e-74	10	11
ENSGAGP00000012064	zf-C2H2	PF00096.26	8.4e-74	11	11
ENSGAGP00000012174	zf-C2H2	PF00096.26	3.8e-73	1	11
ENSGAGP00000012174	zf-C2H2	PF00096.26	3.8e-73	2	11
ENSGAGP00000012174	zf-C2H2	PF00096.26	3.8e-73	3	11
ENSGAGP00000012174	zf-C2H2	PF00096.26	3.8e-73	4	11
ENSGAGP00000012174	zf-C2H2	PF00096.26	3.8e-73	5	11
ENSGAGP00000012174	zf-C2H2	PF00096.26	3.8e-73	6	11
ENSGAGP00000012174	zf-C2H2	PF00096.26	3.8e-73	7	11
ENSGAGP00000012174	zf-C2H2	PF00096.26	3.8e-73	8	11
ENSGAGP00000012174	zf-C2H2	PF00096.26	3.8e-73	9	11
ENSGAGP00000012174	zf-C2H2	PF00096.26	3.8e-73	10	11
ENSGAGP00000012174	zf-C2H2	PF00096.26	3.8e-73	11	11
ENSGAGP00000012045	zf-C2H2	PF00096.26	1.1e-66	1	10
ENSGAGP00000012045	zf-C2H2	PF00096.26	1.1e-66	2	10
ENSGAGP00000012045	zf-C2H2	PF00096.26	1.1e-66	3	10
ENSGAGP00000012045	zf-C2H2	PF00096.26	1.1e-66	4	10
ENSGAGP00000012045	zf-C2H2	PF00096.26	1.1e-66	5	10
ENSGAGP00000012045	zf-C2H2	PF00096.26	1.1e-66	6	10
ENSGAGP00000012045	zf-C2H2	PF00096.26	1.1e-66	7	10
ENSGAGP00000012045	zf-C2H2	PF00096.26	1.1e-66	8	10
ENSGAGP00000012045	zf-C2H2	PF00096.26	1.1e-66	9	10
ENSGAGP00000012045	zf-C2H2	PF00096.26	1.1e-66	10	10
ENSGAGP00000012208	zf-C2H2	PF00096.26	1.6e-61	1	8
ENSGAGP00000012208	zf-C2H2	PF00096.26	1.6e-61	2	8
ENSGAGP00000012208	zf-C2H2	PF00096.26	1.6e-61	3	8
ENSGAGP00000012208	zf-C2H2	PF00096.26	1.6e-61	4	8
ENSGAGP00000012208	zf-C2H2	PF00096.26	1.6e-61	5	8
ENSGAGP00000012208	zf-C2H2	PF00096.26	1.6e-61	6	8
ENSGAGP00000012208	zf-C2H2	PF00096.26	1.6e-61	7	8
ENSGAGP00000012208	zf-C2H2	PF00096.26	1.6e-61	8	8
ENSGAGP00000012155	zf-C2H2	PF00096.26	1.5e-54	1	8
ENSGAGP00000012155	zf-C2H2	PF00096.26	1.5e-54	2	8
ENSGAGP00000012155	zf-C2H2	PF00096.26	1.5e-54	3	8
ENSGAGP00000012155	zf-C2H2	PF00096.26	1.5e-54	4	8
ENSGAGP00000012155	zf-C2H2	PF00096.26	1.5e-54	5	8
ENSGAGP00000012155	zf-C2H2	PF00096.26	1.5e-54	6	8
ENSGAGP00000012155	zf-C2H2	PF00096.26	1.5e-54	7	8
ENSGAGP00000012155	zf-C2H2	PF00096.26	1.5e-54	8	8
ENSGAGP00000012060	zf-C2H2	PF00096.26	1.1e-46	1	7
ENSGAGP00000012060	zf-C2H2	PF00096.26	1.1e-46	2	7
ENSGAGP00000012060	zf-C2H2	PF00096.26	1.1e-46	3	7
ENSGAGP00000012060	zf-C2H2	PF00096.26	1.1e-46	4	7
ENSGAGP00000012060	zf-C2H2	PF00096.26	1.1e-46	5	7
ENSGAGP00000012060	zf-C2H2	PF00096.26	1.1e-46	6	7
ENSGAGP00000012060	zf-C2H2	PF00096.26	1.1e-46	7	7
ENSGAGP00000012208	zf-met	PF12874.7	3.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000013921	-	813	-	ENSGAGP00000012155	270 (aa)	-	-
ENSGAGT00000013892	-	1338	-	ENSGAGP00000012128	445 (aa)	-	-
ENSGAGT00000013813	-	939	-	ENSGAGP00000012060	312 (aa)	-	-
ENSGAGT00000013983	-	816	-	ENSGAGP00000012208	271 (aa)	-	-
ENSGAGT00000013817	-	1422	-	ENSGAGP00000012064	473 (aa)	-	-
ENSGAGT00000013788	-	2124	-	ENSGAGP00000012039	707 (aa)	-	-
ENSGAGT00000013794	-	1293	-	ENSGAGP00000012045	430 (aa)	-	-
ENSGAGT00000013967	-	1698	-	ENSGAGP00000012193	565 (aa)	-	-
ENSGAGT00000013943	-	1272	-	ENSGAGP00000012174	423 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000009272's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000009272's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000009272	-	97	51.181	ENSGAGG00000015899	GFI1	99	53.398
ENSGAGG00000009272	-	97	34.866	ENSGAGG00000020362	PRDM5	84	33.333
ENSGAGG00000009272	-	92	82.979	ENSGAGG00000001645	-	73	87.805
ENSGAGG00000009272	-	97	61.233	ENSGAGG00000006960	-	98	58.020
ENSGAGG00000009272	-	99	64.052	ENSGAGG00000002214	-	99	64.567
ENSGAGG00000009272	-	97	49.627	ENSGAGG00000018885	-	69	53.443
ENSGAGG00000009272	-	95	50.802	ENSGAGG00000004926	-	96	51.445
ENSGAGG00000009272	-	99	61.438	ENSGAGG00000011487	-	100	60.656
ENSGAGG00000009272	-	99	61.364	ENSGAGG00000008773	-	98	61.786
ENSGAGG00000009272	-	98	53.670	ENSGAGG00000005331	-	88	61.702
ENSGAGG00000009272	-	97	67.105	ENSGAGG00000004740	-	96	66.667
ENSGAGG00000009272	-	99	60.656	ENSGAGG00000013851	-	97	60.656
ENSGAGG00000009272	-	99	37.168	ENSGAGG00000025218	ZBTB41	57	35.843
ENSGAGG00000009272	-	99	80.000	ENSGAGG00000020594	-	93	78.378
ENSGAGG00000009272	-	98	60.082	ENSGAGG00000017986	-	94	63.436
ENSGAGG00000009272	-	99	58.451	ENSGAGG00000020168	-	74	60.714
ENSGAGG00000009272	-	97	39.655	ENSGAGG00000014176	ZBTB16	72	38.095
ENSGAGG00000009272	-	96	78.723	ENSGAGG00000010324	-	96	63.636
ENSGAGG00000009272	-	97	53.597	ENSGAGG00000011366	-	99	51.714
ENSGAGG00000009272	-	96	85.000	ENSGAGG00000020134	-	77	85.000
ENSGAGG00000009272	-	97	63.758	ENSGAGG00000016529	-	97	60.131
ENSGAGG00000009272	-	97	39.024	ENSGAGG00000021631	ZNF652	53	41.026
ENSGAGG00000009272	-	97	59.426	ENSGAGG00000015451	-	90	62.882
ENSGAGG00000009272	-	97	57.143	ENSGAGG00000000971	-	92	59.200
ENSGAGG00000009272	-	97	63.084	ENSGAGG00000018445	-	98	61.215
ENSGAGG00000009272	-	99	64.317	ENSGAGG00000010833	-	98	63.636
ENSGAGG00000009272	-	84	39.474	ENSGAGG00000018925	ZNF646	93	45.570
ENSGAGG00000009272	-	99	58.108	ENSGAGG00000014356	-	96	56.655
ENSGAGG00000009272	-	97	63.436	ENSGAGG00000014389	-	96	64.758
ENSGAGG00000009272	-	94	62.054	ENSGAGG00000001387	-	65	62.054
ENSGAGG00000009272	-	97	62.722	ENSGAGG00000010492	-	94	62.722
ENSGAGG00000009272	-	97	56.627	ENSGAGG00000011399	-	96	53.439
ENSGAGG00000009272	-	97	60.000	ENSGAGG00000005805	-	99	58.091
ENSGAGG00000009272	-	97	54.872	ENSGAGG00000015232	-	99	47.857
ENSGAGG00000009272	-	97	66.818	ENSGAGG00000006683	-	97	66.272
ENSGAGG00000009272	-	99	38.290	ENSGAGG00000003095	ZNF865	95	38.926
ENSGAGG00000009272	-	97	48.014	ENSGAGG00000017094	-	52	52.542
ENSGAGG00000009272	-	97	62.838	ENSGAGG00000002179	-	99	62.733
ENSGAGG00000009272	-	98	43.137	ENSGAGG00000003883	ZNF236	67	51.220
ENSGAGG00000009272	-	97	62.941	ENSGAGG00000011574	-	96	60.843
ENSGAGG00000009272	-	97	54.872	ENSGAGG00000006848	-	73	56.545
ENSGAGG00000009272	-	98	55.224	ENSGAGG00000006846	-	97	52.336
ENSGAGG00000009272	-	98	66.079	ENSGAGG00000006323	-	97	66.079
ENSGAGG00000009272	-	97	47.904	ENSGAGG00000013021	-	96	52.381
ENSGAGG00000009272	-	99	52.083	ENSGAGG00000015200	MYNN	58	52.083
ENSGAGG00000009272	-	97	46.038	ENSGAGG00000022571	ZNF319	93	47.085
ENSGAGG00000009272	-	98	58.605	ENSGAGG00000019349	-	99	57.910
ENSGAGG00000009272	-	97	58.079	ENSGAGG00000007230	-	95	57.993
ENSGAGG00000009272	-	99	42.105	ENSGAGG00000021327	GFI1B	66	48.447
ENSGAGG00000009272	-	97	60.072	ENSGAGG00000001469	-	99	65.049
ENSGAGG00000009272	-	99	57.143	ENSGAGG00000017640	-	87	57.143
ENSGAGG00000009272	-	95	33.136	ENSGAGG00000022082	PRDM15	61	33.136
ENSGAGG00000009272	-	96	61.111	ENSGAGG00000002828	-	89	61.111
ENSGAGG00000009272	-	98	63.235	ENSGAGG00000012452	-	93	60.699
ENSGAGG00000009272	-	93	64.179	ENSGAGG00000009739	-	99	64.878

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000009272	-	97	58.046	ENSAMXG00000029161	-	86	56.548	Astyanax_mexicanus
ENSGAGG00000009272	-	97	64.000	ENSCPBG00000021479	-	99	61.386	Chrysemys_picta_bellii
ENSGAGG00000009272	-	98	65.763	ENSCPBG00000004990	-	100	63.768	Chrysemys_picta_bellii
ENSGAGG00000009272	-	98	64.113	ENSCPBG00000001421	-	100	64.878	Chrysemys_picta_bellii
ENSGAGG00000009272	-	97	65.000	ENSCPBG00000004030	-	99	62.214	Chrysemys_picta_bellii
ENSGAGG00000009272	-	98	66.516	ENSCPBG00000001272	-	99	63.077	Chrysemys_picta_bellii
ENSGAGG00000009272	-	99	83.784	ENSCPBG00000012976	-	87	83.784	Chrysemys_picta_bellii
ENSGAGG00000009272	-	99	57.519	ENSCPBG00000021487	-	95	57.519	Chrysemys_picta_bellii
ENSGAGG00000009272	-	97	64.828	ENSCPBG00000016841	-	99	64.828	Chrysemys_picta_bellii
ENSGAGG00000009272	-	92	76.190	ENSPSIG00000012865	-	98	63.897	Pelodiscus_sinensis
ENSGAGG00000009272	-	97	62.613	ENSPSIG00000015216	-	99	62.719	Pelodiscus_sinensis
ENSGAGG00000009272	-	99	60.633	ENSPSIG00000015465	-	99	61.290	Pelodiscus_sinensis
ENSGAGG00000009272	-	97	57.071	ENSPSIG00000000522	-	100	60.684	Pelodiscus_sinensis
ENSGAGG00000009272	-	97	58.300	ENSPSIG00000001026	-	99	63.942	Pelodiscus_sinensis
ENSGAGG00000009272	-	97	68.098	ENSPSIG00000009893	-	100	65.574	Pelodiscus_sinensis
ENSGAGG00000009272	-	97	65.482	ENSPSIG00000002569	-	95	62.621	Pelodiscus_sinensis
ENSGAGG00000009272	-	97	61.644	ENSTGUG00000018327	-	100	71.875	Taeniopygia_guttata
ENSGAGG00000009272	-	98	57.080	ENSTGUG00000016850	-	100	59.193	Taeniopygia_guttata
ENSGAGG00000009272	-	97	52.910	ENSTGUG00000015260	-	100	55.618	Taeniopygia_guttata
ENSGAGG00000009272	-	97	60.309	ENSTGUG00000013736	-	100	61.194	Taeniopygia_guttata
ENSGAGG00000009272	-	97	61.446	ENSTGUG00000018349	-	100	62.963	Taeniopygia_guttata
ENSGAGG00000009272	-	98	58.798	ENSTGUG00000016516	-	100	59.671	Taeniopygia_guttata
ENSGAGG00000009272	-	96	58.685	ENSTGUG00000014888	-	99	59.140	Taeniopygia_guttata
ENSGAGG00000009272	-	97	57.246	ENSTGUG00000018374	-	99	59.459	Taeniopygia_guttata
ENSGAGG00000009272	-	97	64.286	ENSTGUG00000018542	-	99	65.854	Taeniopygia_guttata
ENSGAGG00000009272	-	97	59.375	ENSTGUG00000018518	-	100	59.406	Taeniopygia_guttata
ENSGAGG00000009272	-	97	66.667	ENSTGUG00000016781	-	100	59.677	Taeniopygia_guttata
ENSGAGG00000009272	-	97	59.794	ENSTGUG00000014614	-	98	59.296	Taeniopygia_guttata
ENSGAGG00000009272	-	97	59.211	ENSTGUG00000018445	-	98	62.667	Taeniopygia_guttata