EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000009392 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 29309 bases
Position: chrPPEB01001302.1:285471-314779
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000012247	MMR_HSR1	PF01926.23	4.1e-05	1	1
ENSGAGP00000012227	MMR_HSR1	PF01926.23	4.4e-05	1	1
ENSGAGP00000012244	MMR_HSR1	PF01926.23	8.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000014001	-	2025	-	ENSGAGP00000012221	674 (aa)	-	-
ENSGAGT00000014024	-	1905	-	ENSGAGP00000012244	634 (aa)	-	-
ENSGAGT00000014016	-	2136	-	ENSGAGP00000012236	711 (aa)	-	-
ENSGAGT00000014027	-	1890	-	ENSGAGP00000012247	629 (aa)	-	-
ENSGAGT00000014007	-	1935	-	ENSGAGP00000012227	644 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000009392's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000009392's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000009392	-	98	55.305	ENSAPOG00000009488	-	99	55.859	Acanthochromis_polyacanthus
ENSGAGG00000009392	-	99	51.893	ENSACIG00000004365	-	97	52.885	Amphilophus_citrinellus
ENSGAGG00000009392	-	62	66.667	ENSATEG00000018869	-	98	66.667	Anabas_testudineus
ENSGAGG00000009392	-	98	55.233	ENSACLG00000015278	-	99	55.788	Astatotilapia_calliptera
ENSGAGG00000009392	-	99	89.764	ENSCPBG00000012852	-	89	88.346	Chrysemys_picta_bellii
ENSGAGG00000009392	-	97	55.032	ENSCSEG00000005684	MX1	99	55.032	Cynoglossus_semilaevis
ENSGAGG00000009392	-	89	54.448	ENSHBUG00000011119	-	96	54.982	Haplochromis_burtoni
ENSGAGG00000009392	-	98	49.677	ENSIPUG00000017075	-	99	50.161	Ictalurus_punctatus
ENSGAGG00000009392	-	98	48.957	ENSIPUG00000017098	-	99	49.599	Ictalurus_punctatus
ENSGAGG00000009392	-	97	54.472	ENSIPUG00000004815	-	98	54.797	Ictalurus_punctatus
ENSGAGG00000009392	-	99	55.854	ENSLOCG00000006389	MX1	99	57.097	Lepisosteus_oculatus
ENSGAGG00000009392	-	99	53.662	ENSMZEG00005012472	MX1	98	62.532	Maylandia_zebra
ENSGAGG00000009392	-	59	77.500	ENSODEG00000003389	-	99	74.286	Octodon_degus
ENSGAGG00000009392	-	99	53.822	ENSONIG00000020363	-	97	54.299	Oreochromis_niloticus
ENSGAGG00000009392	-	98	55.645	ENSOMEG00000008446	-	93	66.667	Oryzias_melastigma
ENSGAGG00000009392	-	91	53.912	ENSPNYG00000001452	-	94	55.717	Pundamilia_nyererei
ENSGAGG00000009392	-	62	65.385	ENSPNYG00000001309	MX1	98	65.385	Pundamilia_nyererei
ENSGAGG00000009392	-	98	55.662	ENSPNAG00000027889	-	99	56.280	Pygocentrus_nattereri
ENSGAGG00000009392	-	95	53.719	ENSSFOG00015011797	MX1	99	53.719	Scleropages_formosus
ENSGAGG00000009392	-	98	54.286	ENSSMAG00000010402	MX1	99	55.288	Scophthalmus_maximus
ENSGAGG00000009392	-	99	54.545	ENSSLDG00000014433	-	98	55.024	Seriola_lalandi_dorsalis
ENSGAGG00000009392	-	96	54.146	ENSXCOG00000010594	MX1	99	55.330	Xiphophorus_couchianus
ENSGAGG00000009392	-	99	53.514	ENSXMAG00000002020	MX1	98	54.153	Xiphophorus_maculatus