EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000009825 (Gene tree)
Gene ID: -
Gene Symbol: STAU1
Alias: PPP1R150|STAU
Full Name: staufen double-stranded RNA binding protein 1
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 45374 bases
Position: chrPPEB01003809.1:123639-169012
Accession: 11370
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000012796	dsrm	PF00035.26	5.8e-48	1	4
ENSGAGP00000012796	dsrm	PF00035.26	5.8e-48	2	4
ENSGAGP00000012796	dsrm	PF00035.26	5.8e-48	3	4
ENSGAGP00000012796	dsrm	PF00035.26	5.8e-48	4	4
ENSGAGP00000012798	dsrm	PF00035.26	9.3e-43	1	4
ENSGAGP00000012798	dsrm	PF00035.26	9.3e-43	2	4
ENSGAGP00000012798	dsrm	PF00035.26	9.3e-43	3	4
ENSGAGP00000012798	dsrm	PF00035.26	9.3e-43	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000014671	STAU1-202	2549	-	ENSGAGP00000012798	642 (aa)	-	-
ENSGAGT00000014669	STAU1-201	2693	-	ENSGAGP00000012796	690 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000009825's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000009825's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000009825	STAU1	89	52.747	ENSGAGG00000003794	STAU2	96	49.918

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000009825	STAU1	96	89.328	ENSG00000124214	STAU1	99	89.452	Homo_sapiens
ENSGAGG00000009825	STAU1	97	74.112	ENSAPOG00000017260	stau1	99	72.532	Acanthochromis_polyacanthus
ENSGAGG00000009825	STAU1	99	85.694	ENSAMEG00000013681	STAU1	99	85.694	Ailuropoda_melanoleuca
ENSGAGG00000009825	STAU1	100	73.094	ENSACIG00000015918	stau1	100	73.563	Amphilophus_citrinellus
ENSGAGG00000009825	STAU1	100	73.571	ENSAOCG00000012224	stau1	99	73.677	Amphiprion_ocellaris
ENSGAGG00000009825	STAU1	100	73.714	ENSAPEG00000012308	stau1	99	73.820	Amphiprion_percula
ENSGAGG00000009825	STAU1	100	73.466	ENSATEG00000024600	stau1	100	73.466	Anabas_testudineus
ENSGAGG00000009825	STAU1	100	93.820	ENSAPLG00000010527	STAU1	100	93.820	Anas_platyrhynchos
ENSGAGG00000009825	STAU1	100	93.534	ENSACAG00000015909	STAU1	99	93.534	Anolis_carolinensis
ENSGAGG00000009825	STAU1	96	88.086	ENSANAG00000032714	STAU1	99	88.086	Aotus_nancymaae
ENSGAGG00000009825	STAU1	100	72.624	ENSACLG00000012270	stau1	99	73.247	Astatotilapia_calliptera
ENSGAGG00000009825	STAU1	75	76.731	ENSAMXG00000016812	stau1	99	76.731	Astyanax_mexicanus
ENSGAGG00000009825	STAU1	96	87.352	ENSBTAG00000000241	STAU1	99	87.352	Bos_taurus
ENSGAGG00000009825	STAU1	96	89.130	ENSCJAG00000016233	STAU1	99	89.130	Callithrix_jacchus
ENSGAGG00000009825	STAU1	96	88.077	ENSCAFG00000011347	STAU1	99	88.077	Canis_familiaris
ENSGAGG00000009825	STAU1	96	88.077	ENSCAFG00020017123	STAU1	99	88.077	Canis_lupus_dingo
ENSGAGG00000009825	STAU1	96	87.154	ENSCHIG00000001799	-	99	87.154	Capra_hircus
ENSGAGG00000009825	STAU1	96	86.759	ENSTSYG00000036179	-	99	86.759	Carlito_syrichta
ENSGAGG00000009825	STAU1	71	84.990	ENSCAPG00000017041	STAU1	99	84.990	Cavia_aperea
ENSGAGG00000009825	STAU1	70	83.943	ENSCPOG00000005566	STAU1	99	83.943	Cavia_porcellus
ENSGAGG00000009825	STAU1	96	88.086	ENSCCAG00000034339	STAU1	99	88.086	Cebus_capucinus
ENSGAGG00000009825	STAU1	96	89.348	ENSCATG00000028474	STAU1	99	89.348	Cercocebus_atys
ENSGAGG00000009825	STAU1	71	71.341	ENSCLAG00000002784	-	99	71.341	Chinchilla_lanigera
ENSGAGG00000009825	STAU1	70	87.602	ENSCLAG00000006516	-	99	87.602	Chinchilla_lanigera
ENSGAGG00000009825	STAU1	71	89.249	ENSCSAG00000014986	STAU1	99	89.249	Chlorocebus_sabaeus
ENSGAGG00000009825	STAU1	96	89.152	ENSCHOG00000001511	STAU1	99	89.152	Choloepus_hoffmanni
ENSGAGG00000009825	STAU1	100	98.563	ENSCPBG00000026741	STAU1	100	98.563	Chrysemys_picta_bellii
ENSGAGG00000009825	STAU1	96	89.130	ENSCANG00000039220	STAU1	99	89.130	Colobus_angolensis_palliatus
ENSGAGG00000009825	STAU1	70	82.114	ENSCGRG00001013453	Stau1	99	82.114	Cricetulus_griseus_chok1gshd
ENSGAGG00000009825	STAU1	70	82.114	ENSCGRG00000007216	Stau1	99	82.114	Cricetulus_griseus_crigri
ENSGAGG00000009825	STAU1	99	66.525	ENSCSEG00000000792	stau1	99	67.185	Cynoglossus_semilaevis
ENSGAGG00000009825	STAU1	96	72.414	ENSCVAG00000005906	stau1	99	72.710	Cyprinodon_variegatus
ENSGAGG00000009825	STAU1	100	73.752	ENSDARG00000044182	stau1	100	76.176	Danio_rerio
ENSGAGG00000009825	STAU1	96	89.546	ENSDNOG00000014933	STAU1	96	89.546	Dasypus_novemcinctus
ENSGAGG00000009825	STAU1	70	83.745	ENSDORG00000030220	Stau1	99	83.745	Dipodomys_ordii
ENSGAGG00000009825	STAU1	73	87.500	ENSETEG00000018235	STAU1	86	87.407	Echinops_telfairi
ENSGAGG00000009825	STAU1	96	88.376	ENSEASG00005023343	STAU1	100	88.376	Equus_asinus_asinus
ENSGAGG00000009825	STAU1	96	89.307	ENSECAG00000012894	STAU1	99	89.307	Equus_caballus
ENSGAGG00000009825	STAU1	93	92.188	ENSEEUG00000014344	STAU1	79	92.188	Erinaceus_europaeus
ENSGAGG00000009825	STAU1	100	73.212	ENSELUG00000002529	stau1	99	76.324	Esox_lucius
ENSGAGG00000009825	STAU1	96	87.928	ENSFCAG00000001447	STAU1	99	88.933	Felis_catus
ENSGAGG00000009825	STAU1	100	94.928	ENSFALG00000012940	STAU1	100	94.928	Ficedula_albicollis
ENSGAGG00000009825	STAU1	70	86.382	ENSFDAG00000014119	-	99	86.382	Fukomys_damarensis
ENSGAGG00000009825	STAU1	71	67.951	ENSFDAG00000020837	-	99	66.734	Fukomys_damarensis
ENSGAGG00000009825	STAU1	100	72.896	ENSFHEG00000013517	stau1	100	72.896	Fundulus_heteroclitus
ENSGAGG00000009825	STAU1	100	63.877	ENSGMOG00000016850	stau1	100	63.877	Gadus_morhua
ENSGAGG00000009825	STAU1	100	96.812	ENSGALG00000004736	STAU1	100	96.812	Gallus_gallus
ENSGAGG00000009825	STAU1	97	74.298	ENSGAFG00000010437	stau1	100	72.753	Gambusia_affinis
ENSGAGG00000009825	STAU1	100	72.779	ENSGACG00000001352	stau1	99	72.884	Gasterosteus_aculeatus
ENSGAGG00000009825	STAU1	96	83.495	ENSGGOG00000025351	STAU1	99	90.331	Gorilla_gorilla
ENSGAGG00000009825	STAU1	100	72.908	ENSHBUG00000023668	stau1	99	73.391	Haplochromis_burtoni
ENSGAGG00000009825	STAU1	70	88.477	ENSHGLG00000008730	STAU1	99	88.477	Heterocephalus_glaber_female
ENSGAGG00000009825	STAU1	70	88.477	ENSHGLG00100000098	STAU1	99	88.477	Heterocephalus_glaber_male
ENSGAGG00000009825	STAU1	96	72.156	ENSHCOG00000018461	stau1	100	70.370	Hippocampus_comes
ENSGAGG00000009825	STAU1	99	71.614	ENSIPUG00000023725	stau1	99	71.614	Ictalurus_punctatus
ENSGAGG00000009825	STAU1	70	87.243	ENSSTOG00000003634	STAU1	99	87.243	Ictidomys_tridecemlineatus
ENSGAGG00000009825	STAU1	70	85.802	ENSJJAG00000020032	Stau1	99	85.802	Jaculus_jaculus
ENSGAGG00000009825	STAU1	97	72.593	ENSKMAG00000007135	stau1	97	73.077	Kryptolebias_marmoratus
ENSGAGG00000009825	STAU1	100	71.773	ENSLBEG00000020172	stau1	100	71.773	Labrus_bergylta
ENSGAGG00000009825	STAU1	98	86.705	ENSLACG00000016157	STAU1	97	86.705	Latimeria_chalumnae
ENSGAGG00000009825	STAU1	100	79.799	ENSLOCG00000003134	stau1	100	79.656	Lepisosteus_oculatus
ENSGAGG00000009825	STAU1	73	88.933	ENSLAFG00000003238	STAU1	99	88.933	Loxodonta_africana
ENSGAGG00000009825	STAU1	96	89.348	ENSMFAG00000040931	STAU1	99	90.706	Macaca_fascicularis
ENSGAGG00000009825	STAU1	96	83.689	ENSMMUG00000002302	STAU1	99	90.706	Macaca_mulatta
ENSGAGG00000009825	STAU1	96	89.328	ENSMNEG00000033821	STAU1	99	89.328	Macaca_nemestrina
ENSGAGG00000009825	STAU1	96	89.526	ENSMLEG00000031383	STAU1	99	89.526	Mandrillus_leucophaeus
ENSGAGG00000009825	STAU1	100	73.714	ENSMAMG00000017586	stau1	100	73.714	Mastacembelus_armatus
ENSGAGG00000009825	STAU1	100	72.727	ENSMZEG00005015605	stau1	99	73.352	Maylandia_zebra
ENSGAGG00000009825	STAU1	100	93.680	ENSMGAG00000004719	STAU1	100	93.680	Meleagris_gallopavo
ENSGAGG00000009825	STAU1	70	82.114	ENSMAUG00000013846	Stau1	99	82.114	Mesocricetus_auratus
ENSGAGG00000009825	STAU1	96	86.523	ENSMICG00000001995	STAU1	99	86.523	Microcebus_murinus
ENSGAGG00000009825	STAU1	70	83.368	ENSMOCG00000018743	Stau1	99	83.130	Microtus_ochrogaster
ENSGAGG00000009825	STAU1	97	72.041	ENSMMOG00000015455	stau1	99	77.033	Mola_mola
ENSGAGG00000009825	STAU1	96	93.694	ENSMODG00000016276	STAU1	99	93.694	Monodelphis_domestica
ENSGAGG00000009825	STAU1	99	73.247	ENSMALG00000000045	stau1	99	73.247	Monopterus_albus
ENSGAGG00000009825	STAU1	70	84.091	MGP_CAROLIEiJ_G0024699	Stau1	100	83.918	Mus_caroli
ENSGAGG00000009825	STAU1	70	84.298	ENSMUSG00000039536	Stau1	100	84.124	Mus_musculus
ENSGAGG00000009825	STAU1	70	83.333	MGP_PahariEiJ_G0026141	Stau1	99	83.333	Mus_pahari
ENSGAGG00000009825	STAU1	70	84.298	MGP_SPRETEiJ_G0025619	Stau1	100	84.124	Mus_spretus
ENSGAGG00000009825	STAU1	96	88.537	ENSMPUG00000017581	STAU1	99	88.537	Mustela_putorius_furo
ENSGAGG00000009825	STAU1	96	84.369	ENSMLUG00000008407	STAU1	96	87.945	Myotis_lucifugus
ENSGAGG00000009825	STAU1	70	85.569	ENSNGAG00000007108	Stau1	99	85.569	Nannospalax_galili
ENSGAGG00000009825	STAU1	100	72.766	ENSNBRG00000017596	stau1	99	73.391	Neolamprologus_brichardi
ENSGAGG00000009825	STAU1	96	88.735	ENSNLEG00000006955	STAU1	99	88.735	Nomascus_leucogenys
ENSGAGG00000009825	STAU1	76	94.336	ENSMEUG00000003263	STAU1	91	94.336	Notamacropus_eugenii
ENSGAGG00000009825	STAU1	96	84.980	ENSOPRG00000014569	STAU1	99	84.980	Ochotona_princeps
ENSGAGG00000009825	STAU1	71	87.424	ENSODEG00000006523	STAU1	99	87.627	Octodon_degus
ENSGAGG00000009825	STAU1	100	71.271	ENSONIG00000004152	stau1	99	71.271	Oreochromis_niloticus
ENSGAGG00000009825	STAU1	99	90.531	ENSOANG00000006394	STAU1	99	90.531	Ornithorhynchus_anatinus
ENSGAGG00000009825	STAU1	96	86.957	ENSOCUG00000006214	STAU1	99	86.957	Oryctolagus_cuniculus
ENSGAGG00000009825	STAU1	100	71.469	ENSOMEG00000002388	stau1	100	71.469	Oryzias_melastigma
ENSGAGG00000009825	STAU1	71	60.649	ENSOGAG00000028222	-	98	60.649	Otolemur_garnettii
ENSGAGG00000009825	STAU1	96	87.945	ENSOGAG00000002127	STAU1	96	87.945	Otolemur_garnettii
ENSGAGG00000009825	STAU1	96	87.651	ENSOARG00000012204	STAU1	99	87.651	Ovis_aries
ENSGAGG00000009825	STAU1	96	83.495	ENSPPAG00000032023	STAU1	99	90.331	Pan_paniscus
ENSGAGG00000009825	STAU1	96	85.311	ENSPPRG00000003436	STAU1	99	89.047	Panthera_pardus
ENSGAGG00000009825	STAU1	96	85.311	ENSPTIG00000011768	STAU1	99	87.800	Panthera_tigris_altaica
ENSGAGG00000009825	STAU1	96	83.495	ENSPTRG00000023130	STAU1	99	90.331	Pan_troglodytes
ENSGAGG00000009825	STAU1	96	89.130	ENSPANG00000020560	STAU1	99	89.130	Papio_anubis
ENSGAGG00000009825	STAU1	99	75.429	ENSPKIG00000024588	stau1	99	75.429	Paramormyrops_kingsleyae
ENSGAGG00000009825	STAU1	100	98.841	ENSPSIG00000010731	STAU1	99	98.841	Pelodiscus_sinensis
ENSGAGG00000009825	STAU1	100	73.352	ENSPMGG00000018553	stau1	99	74.848	Periophthalmus_magnuspinnatus
ENSGAGG00000009825	STAU1	70	83.537	ENSPEMG00000022045	Stau1	99	83.537	Peromyscus_maniculatus_bairdii
ENSGAGG00000009825	STAU1	99	91.523	ENSPCIG00000023269	STAU1	99	92.969	Phascolarctos_cinereus
ENSGAGG00000009825	STAU1	100	72.934	ENSPFOG00000017253	stau1	100	72.934	Poecilia_formosa
ENSGAGG00000009825	STAU1	57	74.430	ENSPLAG00000014829	stau1	97	70.361	Poecilia_latipinna
ENSGAGG00000009825	STAU1	100	69.801	ENSPMEG00000007495	stau1	100	69.801	Poecilia_mexicana
ENSGAGG00000009825	STAU1	100	72.507	ENSPREG00000003477	stau1	100	72.507	Poecilia_reticulata
ENSGAGG00000009825	STAU1	96	88.933	ENSPPYG00000011111	STAU1	99	88.933	Pongo_abelii
ENSGAGG00000009825	STAU1	83	86.813	ENSPCAG00000002459	STAU1	99	80.882	Procavia_capensis
ENSGAGG00000009825	STAU1	96	87.747	ENSPCOG00000027746	STAU1	99	87.747	Propithecus_coquereli
ENSGAGG00000009825	STAU1	79	89.333	ENSPVAG00000015019	STAU1	85	89.333	Pteropus_vampyrus
ENSGAGG00000009825	STAU1	100	72.908	ENSPNYG00000014436	stau1	99	73.391	Pundamilia_nyererei
ENSGAGG00000009825	STAU1	100	71.857	ENSPNAG00000011323	stau1	99	72.792	Pygocentrus_nattereri
ENSGAGG00000009825	STAU1	70	82.724	ENSRNOG00000007781	Stau1	99	82.724	Rattus_norvegicus
ENSGAGG00000009825	STAU1	71	88.710	ENSRBIG00000037345	STAU1	100	88.710	Rhinopithecus_bieti
ENSGAGG00000009825	STAU1	96	89.328	ENSRROG00000039008	STAU1	99	89.328	Rhinopithecus_roxellana
ENSGAGG00000009825	STAU1	96	88.086	ENSSBOG00000034448	STAU1	99	88.086	Saimiri_boliviensis_boliviensis
ENSGAGG00000009825	STAU1	96	94.071	ENSSHAG00000009492	STAU1	99	93.994	Sarcophilus_harrisii
ENSGAGG00000009825	STAU1	99	75.325	ENSSFOG00015021497	stau1	99	75.325	Scleropages_formosus
ENSGAGG00000009825	STAU1	100	73.286	ENSSMAG00000017410	stau1	100	73.286	Scophthalmus_maximus
ENSGAGG00000009825	STAU1	100	73.857	ENSSDUG00000019439	stau1	99	73.963	Seriola_dumerili
ENSGAGG00000009825	STAU1	97	75.444	ENSSLDG00000025040	stau1	99	73.820	Seriola_lalandi_dorsalis
ENSGAGG00000009825	STAU1	56	88.889	ENSSARG00000010389	-	62	88.889	Sorex_araneus
ENSGAGG00000009825	STAU1	100	95.977	ENSSPUG00000017983	STAU1	99	96.257	Sphenodon_punctatus
ENSGAGG00000009825	STAU1	97	75.296	ENSSPAG00000019275	stau1	99	73.677	Stegastes_partitus
ENSGAGG00000009825	STAU1	96	88.538	ENSSSCG00000027444	STAU1	99	88.926	Sus_scrofa
ENSGAGG00000009825	STAU1	100	92.297	ENSTGUG00000008784	STAU1	100	92.297	Taeniopygia_guttata
ENSGAGG00000009825	STAU1	97	74.554	ENSTRUG00000005837	stau1	99	73.276	Takifugu_rubripes
ENSGAGG00000009825	STAU1	96	73.037	ENSTNIG00000014732	stau1	99	73.037	Tetraodon_nigroviridis
ENSGAGG00000009825	STAU1	96	70.865	ENSTBEG00000009404	STAU1	99	74.753	Tupaia_belangeri
ENSGAGG00000009825	STAU1	75	92.188	ENSTTRG00000004285	STAU1	91	92.188	Tursiops_truncatus
ENSGAGG00000009825	STAU1	71	86.600	ENSUAMG00000025449	STAU1	99	86.600	Ursus_americanus
ENSGAGG00000009825	STAU1	54	83.333	ENSUMAG00000024475	STAU1	89	83.333	Ursus_maritimus
ENSGAGG00000009825	STAU1	96	88.538	ENSVPAG00000001313	STAU1	99	88.538	Vicugna_pacos
ENSGAGG00000009825	STAU1	96	88.227	ENSVVUG00000022325	STAU1	99	88.227	Vulpes_vulpes
ENSGAGG00000009825	STAU1	100	86.744	ENSXETG00000001783	stau1	99	86.455	Xenopus_tropicalis
ENSGAGG00000009825	STAU1	53	74.054	ENSXCOG00000008804	stau1	94	74.595	Xiphophorus_couchianus
ENSGAGG00000009825	STAU1	100	72.493	ENSXMAG00000016175	stau1	100	72.493	Xiphophorus_maculatus