EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000010067 (Gene tree)
Gene ID: -
Gene Symbol: GPATCH1
Alias: ECGP|FLJ10206|FLJ38686|GPATC1
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 28380 bases
Position: chrPPEB01001887.1:11458-39837
Accession: 24658
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000013135	DUF1604	PF07713.13	1.1e-35	1	1
ENSGAGP00000013132	DUF1604	PF07713.13	1.1e-35	1	1
ENSGAGP00000013135	G-patch	PF01585.23	6.1e-06	1	1
ENSGAGP00000013132	G-patch	PF01585.23	6.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000015037	GPATCH1-201	3056	-	ENSGAGP00000013132	934 (aa)	-	-
ENSGAGT00000015039	GPATCH1-202	3247	-	ENSGAGP00000013135	925 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000010067's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000010067's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000010067	GPATCH1	100	65.259	ENSG00000076650	GPATCH1	100	65.576	Homo_sapiens
ENSGAGG00000010067	GPATCH1	100	65.645	ENSAMEG00000015575	GPATCH1	100	64.811	Ailuropoda_melanoleuca
ENSGAGG00000010067	GPATCH1	80	70.718	ENSAOCG00000006668	gpatch1	74	70.718	Amphiprion_ocellaris
ENSGAGG00000010067	GPATCH1	81	55.065	ENSAPEG00000000026	gpatch1	90	52.023	Amphiprion_percula
ENSGAGG00000010067	GPATCH1	81	53.157	ENSATEG00000014494	gpatch1	90	51.429	Anabas_testudineus
ENSGAGG00000010067	GPATCH1	91	69.599	ENSAPLG00000007584	GPATCH1	96	71.445	Anas_platyrhynchos
ENSGAGG00000010067	GPATCH1	100	65.259	ENSANAG00000027002	GPATCH1	100	65.364	Aotus_nancymaae
ENSGAGG00000010067	GPATCH1	81	53.046	ENSACLG00000024740	gpatch1	79	53.046	Astatotilapia_calliptera
ENSGAGG00000010067	GPATCH1	90	52.245	ENSAMXG00000020177	gpatch1	97	52.355	Astyanax_mexicanus
ENSGAGG00000010067	GPATCH1	91	64.520	ENSBTAG00000000721	GPATCH1	100	64.465	Bos_taurus
ENSGAGG00000010067	GPATCH1	91	65.304	ENSCJAG00000000684	GPATCH1	100	65.048	Callithrix_jacchus
ENSGAGG00000010067	GPATCH1	100	65.859	ENSCAFG00000007457	GPATCH1	84	65.859	Canis_familiaris
ENSGAGG00000010067	GPATCH1	95	65.506	ENSCAFG00020019731	GPATCH1	91	66.082	Canis_lupus_dingo
ENSGAGG00000010067	GPATCH1	91	65.962	ENSCHIG00000019626	GPATCH1	100	65.751	Capra_hircus
ENSGAGG00000010067	GPATCH1	97	61.021	ENSCAPG00000008827	GPATCH1	100	60.803	Cavia_aperea
ENSGAGG00000010067	GPATCH1	99	62.908	ENSCPOG00000024477	GPATCH1	99	62.698	Cavia_porcellus
ENSGAGG00000010067	GPATCH1	100	64.625	ENSCCAG00000024676	GPATCH1	100	64.836	Cebus_capucinus
ENSGAGG00000010067	GPATCH1	100	65.539	ENSCATG00000043637	GPATCH1	100	65.645	Cercocebus_atys
ENSGAGG00000010067	GPATCH1	96	63.274	ENSCLAG00000003395	-	92	63.293	Chinchilla_lanigera
ENSGAGG00000010067	GPATCH1	100	63.464	ENSCSAG00000004743	GPATCH1	100	63.780	Chlorocebus_sabaeus
ENSGAGG00000010067	GPATCH1	82	59.120	ENSCHOG00000012865	GPATCH1	89	59.250	Choloepus_hoffmanni
ENSGAGG00000010067	GPATCH1	83	93.523	ENSCPBG00000000666	GPATCH1	98	93.782	Chrysemys_picta_bellii
ENSGAGG00000010067	GPATCH1	68	37.774	ENSCING00000012518	-	95	34.316	Ciona_intestinalis
ENSGAGG00000010067	GPATCH1	86	69.643	ENSCANG00000012540	GPATCH1	97	70.103	Colobus_angolensis_palliatus
ENSGAGG00000010067	GPATCH1	97	63.117	ENSCGRG00001016736	Gpatch1	100	62.826	Cricetulus_griseus_chok1gshd
ENSGAGG00000010067	GPATCH1	78	56.739	ENSCGRG00000005069	Gpatch1	78	57.065	Cricetulus_griseus_crigri
ENSGAGG00000010067	GPATCH1	89	39.812	ENSCSEG00000019456	-	76	69.388	Cynoglossus_semilaevis
ENSGAGG00000010067	GPATCH1	91	51.832	ENSDARG00000033418	gpatch1	92	52.700	Danio_rerio
ENSGAGG00000010067	GPATCH1	90	64.596	ENSDNOG00000005291	GPATCH1	94	64.596	Dasypus_novemcinctus
ENSGAGG00000010067	GPATCH1	94	60.565	ENSDORG00000012546	Gpatch1	94	61.105	Dipodomys_ordii
ENSGAGG00000010067	GPATCH1	82	31.250	FBgn0036386	CG8833	66	34.311	Drosophila_melanogaster
ENSGAGG00000010067	GPATCH1	99	60.000	ENSETEG00000003626	GPATCH1	91	60.094	Echinops_telfairi
ENSGAGG00000010067	GPATCH1	95	35.155	ENSEBUG00000011286	gpatch1	91	36.023	Eptatretus_burgeri
ENSGAGG00000010067	GPATCH1	90	65.166	ENSEASG00005021162	GPATCH1	92	65.284	Equus_asinus_asinus
ENSGAGG00000010067	GPATCH1	91	65.258	ENSECAG00000022743	GPATCH1	88	65.376	Equus_caballus
ENSGAGG00000010067	GPATCH1	73	66.019	ENSEEUG00000012925	GPATCH1	73	66.019	Erinaceus_europaeus
ENSGAGG00000010067	GPATCH1	99	47.143	ENSELUG00000018195	gpatch1	90	49.494	Esox_lucius
ENSGAGG00000010067	GPATCH1	100	64.308	ENSFCAG00000014917	GPATCH1	100	64.414	Felis_catus
ENSGAGG00000010067	GPATCH1	99	69.133	ENSFALG00000007821	GPATCH1	99	70.402	Ficedula_albicollis
ENSGAGG00000010067	GPATCH1	88	63.548	ENSFDAG00000003871	GPATCH1	91	62.107	Fukomys_damarensis
ENSGAGG00000010067	GPATCH1	89	50.585	ENSGMOG00000003830	gpatch1	95	50.585	Gadus_morhua
ENSGAGG00000010067	GPATCH1	93	71.478	ENSGALG00000004839	GPATCH1	94	72.313	Gallus_gallus
ENSGAGG00000010067	GPATCH1	89	49.764	ENSGACG00000017544	gpatch1	93	49.527	Gasterosteus_aculeatus
ENSGAGG00000010067	GPATCH1	98	64.693	ENSGGOG00000010862	GPATCH1	100	65.435	Gorilla_gorilla
ENSGAGG00000010067	GPATCH1	81	53.376	ENSHBUG00000023462	gpatch1	90	50.907	Haplochromis_burtoni
ENSGAGG00000010067	GPATCH1	100	64.278	ENSHGLG00000009334	GPATCH1	100	63.845	Heterocephalus_glaber_female
ENSGAGG00000010067	GPATCH1	100	64.384	ENSHGLG00100018074	GPATCH1	100	63.950	Heterocephalus_glaber_male
ENSGAGG00000010067	GPATCH1	99	50.853	ENSIPUG00000014977	gpatch1	90	52.349	Ictalurus_punctatus
ENSGAGG00000010067	GPATCH1	100	64.620	ENSSTOG00000003720	GPATCH1	100	65.514	Ictidomys_tridecemlineatus
ENSGAGG00000010067	GPATCH1	91	64.144	ENSJJAG00000023765	Gpatch1	99	63.502	Jaculus_jaculus
ENSGAGG00000010067	GPATCH1	81	52.625	ENSKMAG00000017950	gpatch1	90	51.323	Kryptolebias_marmoratus
ENSGAGG00000010067	GPATCH1	81	51.875	ENSLBEG00000026527	gpatch1	88	49.447	Labrus_bergylta
ENSGAGG00000010067	GPATCH1	87	60.901	ENSLACG00000008130	GPATCH1	90	61.743	Latimeria_chalumnae
ENSGAGG00000010067	GPATCH1	99	51.525	ENSLOCG00000001800	gpatch1	89	55.490	Lepisosteus_oculatus
ENSGAGG00000010067	GPATCH1	91	65.845	ENSLAFG00000013589	GPATCH1	100	65.441	Loxodonta_africana
ENSGAGG00000010067	GPATCH1	90	65.643	ENSMFAG00000034418	GPATCH1	83	79.630	Macaca_fascicularis
ENSGAGG00000010067	GPATCH1	100	64.979	ENSMMUG00000011790	GPATCH1	100	65.295	Macaca_mulatta
ENSGAGG00000010067	GPATCH1	100	64.942	ENSMNEG00000045084	GPATCH1	100	65.259	Macaca_nemestrina
ENSGAGG00000010067	GPATCH1	93	58.904	ENSMLEG00000043840	GPATCH1	97	58.904	Mandrillus_leucophaeus
ENSGAGG00000010067	GPATCH1	81	53.046	ENSMZEG00005001926	gpatch1	80	53.046	Maylandia_zebra
ENSGAGG00000010067	GPATCH1	91	72.642	ENSMGAG00000005775	GPATCH1	91	72.973	Meleagris_gallopavo
ENSGAGG00000010067	GPATCH1	90	57.625	ENSMICG00000004829	GPATCH1	93	57.625	Microcebus_murinus
ENSGAGG00000010067	GPATCH1	91	63.182	ENSMOCG00000000174	Gpatch1	92	64.111	Microtus_ochrogaster
ENSGAGG00000010067	GPATCH1	83	50.498	ENSMMOG00000002140	gpatch1	87	50.893	Mola_mola
ENSGAGG00000010067	GPATCH1	100	64.942	ENSMODG00000012226	GPATCH1	100	65.470	Monodelphis_domestica
ENSGAGG00000010067	GPATCH1	99	48.806	ENSMALG00000014386	gpatch1	90	51.217	Monopterus_albus
ENSGAGG00000010067	GPATCH1	100	62.764	ENSMUSG00000063808	Gpatch1	100	83.000	Mus_musculus
ENSGAGG00000010067	GPATCH1	100	64.179	MGP_PahariEiJ_G0012816	Gpatch1	100	83.000	Mus_pahari
ENSGAGG00000010067	GPATCH1	100	62.939	MGP_SPRETEiJ_G0030681	Gpatch1	100	83.000	Mus_spretus
ENSGAGG00000010067	GPATCH1	100	66.173	ENSMPUG00000007658	GPATCH1	100	65.856	Mustela_putorius_furo
ENSGAGG00000010067	GPATCH1	100	64.271	ENSMLUG00000012161	GPATCH1	100	65.158	Myotis_lucifugus
ENSGAGG00000010067	GPATCH1	100	63.425	ENSNGAG00000012455	Gpatch1	100	62.671	Nannospalax_galili
ENSGAGG00000010067	GPATCH1	100	65.470	ENSNLEG00000007659	GPATCH1	100	65.576	Nomascus_leucogenys
ENSGAGG00000010067	GPATCH1	77	62.050	ENSMEUG00000015174	GPATCH1	76	62.657	Notamacropus_eugenii
ENSGAGG00000010067	GPATCH1	99	60.651	ENSODEG00000007103	GPATCH1	99	61.900	Octodon_degus
ENSGAGG00000010067	GPATCH1	81	54.226	ENSONIG00000003302	gpatch1	91	52.169	Oreochromis_niloticus
ENSGAGG00000010067	GPATCH1	99	68.240	ENSOANG00000012732	GPATCH1	99	68.348	Ornithorhynchus_anatinus
ENSGAGG00000010067	GPATCH1	100	64.651	ENSOCUG00000015905	GPATCH1	99	65.203	Oryctolagus_cuniculus
ENSGAGG00000010067	GPATCH1	89	50.413	ENSORLG00000018706	gpatch1	87	50.708	Oryzias_latipes
ENSGAGG00000010067	GPATCH1	89	48.601	ENSOMEG00000022688	gpatch1	89	50.530	Oryzias_melastigma
ENSGAGG00000010067	GPATCH1	81	68.289	ENSOGAG00000004016	GPATCH1	95	67.852	Otolemur_garnettii
ENSGAGG00000010067	GPATCH1	90	65.677	ENSOARG00000004365	GPATCH1	99	65.598	Ovis_aries
ENSGAGG00000010067	GPATCH1	100	65.259	ENSPPAG00000020990	GPATCH1	100	65.576	Pan_paniscus
ENSGAGG00000010067	GPATCH1	100	63.992	ENSPPRG00000017245	GPATCH1	100	64.097	Panthera_pardus
ENSGAGG00000010067	GPATCH1	100	64.979	ENSPTIG00000019649	GPATCH1	100	65.084	Panthera_tigris_altaica
ENSGAGG00000010067	GPATCH1	100	65.259	ENSPTRG00000010803	GPATCH1	100	65.576	Pan_troglodytes
ENSGAGG00000010067	GPATCH1	91	65.258	ENSPANG00000012374	GPATCH1	83	79.630	Papio_anubis
ENSGAGG00000010067	GPATCH1	81	55.909	ENSPKIG00000020745	gpatch1	77	56.499	Paramormyrops_kingsleyae
ENSGAGG00000010067	GPATCH1	99	85.081	ENSPSIG00000013433	GPATCH1	99	85.405	Pelodiscus_sinensis
ENSGAGG00000010067	GPATCH1	100	62.986	ENSPEMG00000000636	Gpatch1	100	63.751	Peromyscus_maniculatus_bairdii
ENSGAGG00000010067	GPATCH1	92	66.899	ENSPCIG00000021003	GPATCH1	96	67.703	Phascolarctos_cinereus
ENSGAGG00000010067	GPATCH1	70	48.260	ENSPREG00000008264	gpatch1	97	43.698	Poecilia_reticulata
ENSGAGG00000010067	GPATCH1	100	63.569	ENSPPYG00000009824	GPATCH1	100	63.675	Pongo_abelii
ENSGAGG00000010067	GPATCH1	82	60.623	ENSPCAG00000005931	GPATCH1	92	60.989	Procavia_capensis
ENSGAGG00000010067	GPATCH1	90	63.325	ENSPCOG00000009674	GPATCH1	96	62.618	Propithecus_coquereli
ENSGAGG00000010067	GPATCH1	78	65.217	ENSPVAG00000017767	GPATCH1	78	64.946	Pteropus_vampyrus
ENSGAGG00000010067	GPATCH1	81	53.325	ENSPNYG00000018189	gpatch1	89	53.069	Pundamilia_nyererei
ENSGAGG00000010067	GPATCH1	90	53.552	ENSPNAG00000013187	gpatch1	92	54.254	Pygocentrus_nattereri
ENSGAGG00000010067	GPATCH1	100	64.187	ENSRNOG00000011584	Gpatch1	100	64.211	Rattus_norvegicus
ENSGAGG00000010067	GPATCH1	100	58.289	ENSRBIG00000034723	GPATCH1	92	58.968	Rhinopithecus_bieti
ENSGAGG00000010067	GPATCH1	100	64.836	ENSRROG00000024428	GPATCH1	100	65.259	Rhinopithecus_roxellana
ENSGAGG00000010067	GPATCH1	91	65.651	ENSSBOG00000034650	GPATCH1	100	65.364	Saimiri_boliviensis_boliviensis
ENSGAGG00000010067	GPATCH1	100	65.742	ENSSHAG00000016016	GPATCH1	100	66.279	Sarcophilus_harrisii
ENSGAGG00000010067	GPATCH1	89	55.803	ENSSFOG00015011535	gpatch1	89	56.206	Scleropages_formosus
ENSGAGG00000010067	GPATCH1	96	54.525	ENSSMAG00000002883	gpatch1	93	46.121	Scophthalmus_maximus
ENSGAGG00000010067	GPATCH1	81	52.070	ENSSDUG00000007444	gpatch1	89	50.840	Seriola_dumerili
ENSGAGG00000010067	GPATCH1	81	51.861	ENSSLDG00000002856	gpatch1	89	52.572	Seriola_lalandi_dorsalis
ENSGAGG00000010067	GPATCH1	72	70.282	ENSSARG00000004108	GPATCH1	72	70.282	Sorex_araneus
ENSGAGG00000010067	GPATCH1	91	65.610	ENSSSCG00000002865	GPATCH1	94	65.845	Sus_scrofa
ENSGAGG00000010067	GPATCH1	93	70.311	ENSTGUG00000009401	GPATCH1	92	72.931	Taeniopygia_guttata
ENSGAGG00000010067	GPATCH1	80	52.037	ENSTRUG00000005785	-	89	50.355	Takifugu_rubripes
ENSGAGG00000010067	GPATCH1	80	52.037	ENSTRUG00000025081	gpatch1	89	50.355	Takifugu_rubripes
ENSGAGG00000010067	GPATCH1	79	51.783	ENSTNIG00000002554	gpatch1	95	52.042	Tetraodon_nigroviridis
ENSGAGG00000010067	GPATCH1	61	60.894	ENSTBEG00000007750	-	80	60.894	Tupaia_belangeri
ENSGAGG00000010067	GPATCH1	90	58.038	ENSTTRG00000012221	GPATCH1	99	58.879	Tursiops_truncatus
ENSGAGG00000010067	GPATCH1	90	65.366	ENSUMAG00000014645	GPATCH1	100	62.150	Ursus_maritimus
ENSGAGG00000010067	GPATCH1	79	79.661	ENSVPAG00000010313	GPATCH1	86	79.570	Vicugna_pacos
ENSGAGG00000010067	GPATCH1	95	65.056	ENSVVUG00000016572	GPATCH1	91	65.614	Vulpes_vulpes
ENSGAGG00000010067	GPATCH1	100	50.104	ENSXETG00000018276	gpatch1	94	56.746	Xenopus_tropicalis