EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000010269 (Gene tree)
Gene ID: -
Gene Symbol: HELLS
Alias: LSH|Nbla10143|PASG|SMARCA6
Full Name: helicase%2C lymphoid specific
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 38019 bases
Position: chrPPEB01000680.1:243784-281802
Accession: 4861
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000013449	ResIII	PF04851.15	1.4e-06	1	1
ENSGAGP00000013453	ResIII	PF04851.15	1.4e-06	1	1
ENSGAGP00000013459	ResIII	PF04851.15	1.4e-06	1	1
ENSGAGP00000013456	ResIII	PF04851.15	1.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000015404	HELLS-204	2040	-	ENSGAGP00000013459	679 (aa)	-	-
ENSGAGT00000015400	HELLS-203	2106	-	ENSGAGP00000013456	701 (aa)	-	-
ENSGAGT00000015389	HELLS-201	3251	-	ENSGAGP00000013449	696 (aa)	-	-
ENSGAGT00000015394	HELLS-202	3198	-	ENSGAGP00000013453	696 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000010269's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000010269's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000010269	HELLS	65	37.000	ENSGAGG00000014089	RAD54L	63	35.349
ENSGAGG00000010269	HELLS	79	37.431	ENSGAGG00000008582	SMARCAD1	50	37.615
ENSGAGG00000010269	HELLS	77	47.809	ENSGAGG00000023575	SMARCA1	52	47.809
ENSGAGG00000010269	HELLS	79	39.852	ENSGAGG00000014432	CHD1L	53	39.852
ENSGAGG00000010269	HELLS	85	36.824	ENSGAGG00000013176	-	67	35.781

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000010269	HELLS	100	83.811	ENSG00000119969	HELLS	99	83.597	Homo_sapiens
ENSGAGG00000010269	HELLS	97	71.534	ENSAPOG00000007707	hells	89	70.117	Acanthochromis_polyacanthus
ENSGAGG00000010269	HELLS	100	83.501	ENSAMEG00000013525	HELLS	85	81.933	Ailuropoda_melanoleuca
ENSGAGG00000010269	HELLS	98	71.471	ENSACIG00000018996	hells	99	70.100	Amphilophus_citrinellus
ENSGAGG00000010269	HELLS	99	71.726	ENSAOCG00000006348	hells	86	69.615	Amphiprion_ocellaris
ENSGAGG00000010269	HELLS	99	71.726	ENSAPEG00000001422	hells	86	69.830	Amphiprion_percula
ENSGAGG00000010269	HELLS	99	71.620	ENSATEG00000008107	hells	88	71.037	Anabas_testudineus
ENSGAGG00000010269	HELLS	99	91.643	ENSAPLG00000002649	HELLS	88	91.643	Anas_platyrhynchos
ENSGAGG00000010269	HELLS	99	81.684	ENSACAG00000028785	HELLS	95	79.692	Anolis_carolinensis
ENSGAGG00000010269	HELLS	100	83.501	ENSANAG00000034765	-	99	83.285	Aotus_nancymaae
ENSGAGG00000010269	HELLS	99	70.254	ENSACLG00000007613	hells	88	69.353	Astatotilapia_calliptera
ENSGAGG00000010269	HELLS	95	72.025	ENSAMXG00000002088	hells	97	71.131	Astyanax_mexicanus
ENSGAGG00000010269	HELLS	99	83.780	ENSBTAG00000005979	HELLS	100	83.780	Bos_taurus
ENSGAGG00000010269	HELLS	100	83.070	ENSCJAG00000015819	HELLS	99	82.853	Callithrix_jacchus
ENSGAGG00000010269	HELLS	100	83.954	ENSCAFG00000008090	HELLS	83	84.241	Canis_familiaris
ENSGAGG00000010269	HELLS	100	84.218	ENSCAFG00020004809	HELLS	90	83.546	Canis_lupus_dingo
ENSGAGG00000010269	HELLS	99	83.432	ENSCHIG00000019462	HELLS	88	82.303	Capra_hircus
ENSGAGG00000010269	HELLS	100	82.951	ENSTSYG00000005811	-	99	82.878	Carlito_syrichta
ENSGAGG00000010269	HELLS	100	82.951	ENSCPOG00000003043	HELLS	85	81.259	Cavia_porcellus
ENSGAGG00000010269	HELLS	64	84.971	ENSCCAG00000026761	HELLS	97	84.971	Cebus_capucinus
ENSGAGG00000010269	HELLS	100	83.788	ENSCATG00000033830	HELLS	99	83.573	Cercocebus_atys
ENSGAGG00000010269	HELLS	100	82.808	ENSCLAG00000003938	HELLS	87	81.399	Chinchilla_lanigera
ENSGAGG00000010269	HELLS	100	83.644	ENSCSAG00000006181	HELLS	100	81.933	Chlorocebus_sabaeus
ENSGAGG00000010269	HELLS	100	98.293	ENSCPBG00000025739	HELLS	100	98.293	Chrysemys_picta_bellii
ENSGAGG00000010269	HELLS	100	83.501	ENSCANG00000037736	HELLS	99	83.285	Colobus_angolensis_palliatus
ENSGAGG00000010269	HELLS	100	83.238	ENSCGRG00001017410	Hells	87	82.113	Cricetulus_griseus_chok1gshd
ENSGAGG00000010269	HELLS	98	69.767	ENSCSEG00000016985	hells	90	67.949	Cynoglossus_semilaevis
ENSGAGG00000010269	HELLS	73	68.560	ENSCVAG00000000159	hells	97	67.754	Cyprinodon_variegatus
ENSGAGG00000010269	HELLS	99	72.083	ENSDARG00000057738	hells	82	71.490	Danio_rerio
ENSGAGG00000010269	HELLS	93	84.543	ENSDNOG00000017758	HELLS	100	84.543	Dasypus_novemcinctus
ENSGAGG00000010269	HELLS	100	83.524	ENSDORG00000011812	Hells	89	81.933	Dipodomys_ordii
ENSGAGG00000010269	HELLS	61	77.778	ENSEBUG00000016152	hells	72	77.778	Eptatretus_burgeri
ENSGAGG00000010269	HELLS	100	84.648	ENSEASG00005011764	HELLS	88	82.913	Equus_asinus_asinus
ENSGAGG00000010269	HELLS	100	84.362	ENSECAG00000018810	HELLS	85	82.633	Equus_caballus
ENSGAGG00000010269	HELLS	78	95.652	ENSEEUG00000007680	HELLS	76	95.652	Erinaceus_europaeus
ENSGAGG00000010269	HELLS	99	70.809	ENSELUG00000014909	hells	81	70.809	Esox_lucius
ENSGAGG00000010269	HELLS	100	83.931	ENSFCAG00000005206	HELLS	99	83.718	Felis_catus
ENSGAGG00000010269	HELLS	99	90.216	ENSFALG00000007136	HELLS	84	90.216	Ficedula_albicollis
ENSGAGG00000010269	HELLS	100	82.665	ENSFDAG00000010042	HELLS	87	81.119	Fukomys_damarensis
ENSGAGG00000010269	HELLS	99	69.940	ENSFHEG00000022950	hells	93	69.598	Fundulus_heteroclitus
ENSGAGG00000010269	HELLS	100	90.258	ENSGALG00000005451	HELLS	100	90.258	Gallus_gallus
ENSGAGG00000010269	HELLS	99	70.089	ENSGAFG00000001204	hells	83	67.837	Gambusia_affinis
ENSGAGG00000010269	HELLS	99	68.876	ENSGACG00000003897	hells	82	68.876	Gasterosteus_aculeatus
ENSGAGG00000010269	HELLS	100	83.811	ENSGGOG00000008103	HELLS	99	83.597	Gorilla_gorilla
ENSGAGG00000010269	HELLS	99	70.254	ENSHBUG00000010270	hells	88	69.353	Haplochromis_burtoni
ENSGAGG00000010269	HELLS	87	82.759	ENSHGLG00000006537	-	99	82.759	Heterocephalus_glaber_female
ENSGAGG00000010269	HELLS	100	83.524	ENSHGLG00000011377	-	87	81.818	Heterocephalus_glaber_female
ENSGAGG00000010269	HELLS	100	83.238	ENSHGLG00100017230	-	87	81.538	Heterocephalus_glaber_male
ENSGAGG00000010269	HELLS	99	74.069	ENSHGLG00100001957	-	93	72.817	Heterocephalus_glaber_male
ENSGAGG00000010269	HELLS	99	69.971	ENSHCOG00000001119	hells	96	69.971	Hippocampus_comes
ENSGAGG00000010269	HELLS	99	70.545	ENSIPUG00000002634	HELLS	84	68.951	Ictalurus_punctatus
ENSGAGG00000010269	HELLS	100	84.241	ENSSTOG00000021976	HELLS	87	82.657	Ictidomys_tridecemlineatus
ENSGAGG00000010269	HELLS	99	82.988	ENSJJAG00000000865	Hells	90	81.727	Jaculus_jaculus
ENSGAGG00000010269	HELLS	99	71.088	ENSKMAG00000017279	hells	83	69.492	Kryptolebias_marmoratus
ENSGAGG00000010269	HELLS	99	72.347	ENSLBEG00000027807	hells	86	71.225	Labrus_bergylta
ENSGAGG00000010269	HELLS	100	83.954	ENSLAFG00000007049	HELLS	87	82.238	Loxodonta_africana
ENSGAGG00000010269	HELLS	100	83.788	ENSMFAG00000044053	HELLS	99	83.573	Macaca_fascicularis
ENSGAGG00000010269	HELLS	99	83.876	ENSMMUG00000017255	HELLS	100	83.694	Macaca_mulatta
ENSGAGG00000010269	HELLS	100	83.788	ENSMNEG00000042628	HELLS	99	83.573	Macaca_nemestrina
ENSGAGG00000010269	HELLS	100	83.788	ENSMLEG00000041751	HELLS	99	83.573	Mandrillus_leucophaeus
ENSGAGG00000010269	HELLS	99	69.986	ENSMAMG00000009850	hells	98	69.767	Mastacembelus_armatus
ENSGAGG00000010269	HELLS	99	70.254	ENSMZEG00005018414	hells	88	69.353	Maylandia_zebra
ENSGAGG00000010269	HELLS	100	90.143	ENSMGAG00000006818	HELLS	97	91.855	Meleagris_gallopavo
ENSGAGG00000010269	HELLS	100	83.668	ENSMAUG00000021941	Hells	88	82.073	Mesocricetus_auratus
ENSGAGG00000010269	HELLS	85	84.174	ENSMICG00000046554	-	95	84.174	Microcebus_murinus
ENSGAGG00000010269	HELLS	100	82.951	ENSMOCG00000019342	Hells	89	81.232	Microtus_ochrogaster
ENSGAGG00000010269	HELLS	99	65.997	ENSMMOG00000007950	hells	85	65.997	Mola_mola
ENSGAGG00000010269	HELLS	99	71.001	ENSMALG00000010244	hells	85	70.360	Monopterus_albus
ENSGAGG00000010269	HELLS	100	82.808	MGP_CAROLIEiJ_G0022930	Hells	87	81.513	Mus_caroli
ENSGAGG00000010269	HELLS	100	82.665	ENSMUSG00000025001	Hells	87	81.373	Mus_musculus
ENSGAGG00000010269	HELLS	100	83.381	MGP_PahariEiJ_G0014423	Hells	87	82.073	Mus_pahari
ENSGAGG00000010269	HELLS	100	83.238	MGP_SPRETEiJ_G0023848	Hells	87	81.933	Mus_spretus
ENSGAGG00000010269	HELLS	100	83.788	ENSMPUG00000017131	HELLS	85	82.073	Mustela_putorius_furo
ENSGAGG00000010269	HELLS	100	84.075	ENSMLUG00000030511	HELLS	85	82.493	Myotis_lucifugus
ENSGAGG00000010269	HELLS	100	82.235	ENSNGAG00000014049	Hells	85	80.839	Nannospalax_galili
ENSGAGG00000010269	HELLS	99	66.218	ENSNBRG00000024242	hells	88	65.612	Neolamprologus_brichardi
ENSGAGG00000010269	HELLS	100	83.214	ENSNLEG00000012987	HELLS	100	82.073	Nomascus_leucogenys
ENSGAGG00000010269	HELLS	100	81.948	ENSODEG00000015916	HELLS	85	80.420	Octodon_degus
ENSGAGG00000010269	HELLS	99	69.896	ENSONIG00000013166	hells	83	68.079	Oreochromis_niloticus
ENSGAGG00000010269	HELLS	100	88.395	ENSOANG00000005139	HELLS	87	86.434	Ornithorhynchus_anatinus
ENSGAGG00000010269	HELLS	100	84.218	ENSOCUG00000026731	HELLS	83	84.218	Oryctolagus_cuniculus
ENSGAGG00000010269	HELLS	99	71.343	ENSORLG00000000987	hells	86	70.647	Oryzias_latipes
ENSGAGG00000010269	HELLS	99	70.746	ENSORLG00020003952	hells	86	69.928	Oryzias_latipes_hni
ENSGAGG00000010269	HELLS	99	70.685	ENSORLG00015010960	hells	86	69.496	Oryzias_latipes_hsok
ENSGAGG00000010269	HELLS	99	70.387	ENSOMEG00000000135	hells	83	68.354	Oryzias_melastigma
ENSGAGG00000010269	HELLS	100	83.668	ENSOGAG00000017145	HELLS	86	81.958	Otolemur_garnettii
ENSGAGG00000010269	HELLS	100	83.501	ENSOARG00000004495	HELLS	85	81.933	Ovis_aries
ENSGAGG00000010269	HELLS	100	83.668	ENSPPAG00000001726	HELLS	99	83.453	Pan_paniscus
ENSGAGG00000010269	HELLS	100	83.931	ENSPPRG00000005839	HELLS	99	83.718	Panthera_pardus
ENSGAGG00000010269	HELLS	100	83.931	ENSPTIG00000007647	HELLS	99	83.718	Panthera_tigris_altaica
ENSGAGG00000010269	HELLS	99	83.580	ENSPTRG00000002778	HELLS	99	83.309	Pan_troglodytes
ENSGAGG00000010269	HELLS	100	83.788	ENSPANG00000033528	HELLS	99	83.573	Papio_anubis
ENSGAGG00000010269	HELLS	99	70.707	ENSPKIG00000010890	hells	87	70.029	Paramormyrops_kingsleyae
ENSGAGG00000010269	HELLS	100	95.559	ENSPSIG00000005462	HELLS	90	93.838	Pelodiscus_sinensis
ENSGAGG00000010269	HELLS	97	70.091	ENSPMGG00000014690	hells	98	69.006	Periophthalmus_magnuspinnatus
ENSGAGG00000010269	HELLS	100	75.249	ENSPEMG00000017579	Hells	86	74.090	Peromyscus_maniculatus_bairdii
ENSGAGG00000010269	HELLS	94	66.362	ENSPMAG00000004376	hells	82	65.832	Petromyzon_marinus
ENSGAGG00000010269	HELLS	100	85.694	ENSPCIG00000013361	HELLS	85	84.218	Phascolarctos_cinereus
ENSGAGG00000010269	HELLS	99	68.899	ENSPFOG00000001954	hells	83	66.713	Poecilia_formosa
ENSGAGG00000010269	HELLS	99	69.048	ENSPLAG00000006504	hells	97	67.192	Poecilia_latipinna
ENSGAGG00000010269	HELLS	99	68.899	ENSPMEG00000003024	hells	97	67.049	Poecilia_mexicana
ENSGAGG00000010269	HELLS	99	69.494	ENSPREG00000020337	hells	83	67.275	Poecilia_reticulata
ENSGAGG00000010269	HELLS	100	78.495	ENSPPYG00000002502	HELLS	86	76.873	Pongo_abelii
ENSGAGG00000010269	HELLS	99	80.769	ENSPCAG00000013618	HELLS	83	80.692	Procavia_capensis
ENSGAGG00000010269	HELLS	100	84.075	ENSPCOG00000023985	HELLS	99	83.862	Propithecus_coquereli
ENSGAGG00000010269	HELLS	90	85.083	ENSPVAG00000017899	HELLS	77	85.083	Pteropus_vampyrus
ENSGAGG00000010269	HELLS	99	68.161	ENSPNYG00000009100	hells	87	67.435	Pundamilia_nyererei
ENSGAGG00000010269	HELLS	97	70.320	ENSPNAG00000029968	hells	84	70.103	Pygocentrus_nattereri
ENSGAGG00000010269	HELLS	100	83.070	ENSRNOG00000047692	LOC100911660	87	82.073	Rattus_norvegicus
ENSGAGG00000010269	HELLS	100	83.070	ENSRNOG00000047104	Hells	85	82.073	Rattus_norvegicus
ENSGAGG00000010269	HELLS	99	83.580	ENSRBIG00000041080	HELLS	99	83.580	Rhinopithecus_bieti
ENSGAGG00000010269	HELLS	100	83.644	ENSRROG00000040169	HELLS	99	83.429	Rhinopithecus_roxellana
ENSGAGG00000010269	HELLS	100	85.551	ENSSHAG00000014358	HELLS	87	83.939	Sarcophilus_harrisii
ENSGAGG00000010269	HELLS	99	71.893	ENSSFOG00015017895	hells	85	71.286	Scleropages_formosus
ENSGAGG00000010269	HELLS	99	69.955	ENSSMAG00000017423	hells	87	69.420	Scophthalmus_maximus
ENSGAGG00000010269	HELLS	99	70.703	ENSSDUG00000016924	hells	89	70.173	Seriola_dumerili
ENSGAGG00000010269	HELLS	99	68.806	ENSSLDG00000018960	hells	83	67.373	Seriola_lalandi_dorsalis
ENSGAGG00000010269	HELLS	100	87.553	ENSSPUG00000017425	HELLS	87	87.553	Sphenodon_punctatus
ENSGAGG00000010269	HELLS	96	71.088	ENSSPAG00000015579	hells	99	68.076	Stegastes_partitus
ENSGAGG00000010269	HELLS	100	84.075	ENSSSCG00000010486	HELLS	85	82.493	Sus_scrofa
ENSGAGG00000010269	HELLS	100	90.544	ENSTGUG00000007157	HELLS	84	90.544	Taeniopygia_guttata
ENSGAGG00000010269	HELLS	99	70.833	ENSTRUG00000000350	hells	87	70.143	Takifugu_rubripes
ENSGAGG00000010269	HELLS	99	59.858	ENSTNIG00000003738	hells	88	58.530	Tetraodon_nigroviridis
ENSGAGG00000010269	HELLS	100	83.688	ENSUAMG00000003343	HELLS	87	83.688	Ursus_americanus
ENSGAGG00000010269	HELLS	100	84.075	ENSUMAG00000004748	HELLS	98	83.602	Ursus_maritimus
ENSGAGG00000010269	HELLS	100	82.927	ENSVPAG00000010115	HELLS	85	81.092	Vicugna_pacos
ENSGAGG00000010269	HELLS	100	84.362	ENSVVUG00000022808	HELLS	85	82.493	Vulpes_vulpes
ENSGAGG00000010269	HELLS	99	69.104	ENSXCOG00000013840	hells	85	68.247	Xiphophorus_couchianus
ENSGAGG00000010269	HELLS	99	69.494	ENSXMAG00000005731	hells	97	68.489	Xiphophorus_maculatus